KEGG   Onychostoma macrolepis: 131529406
Entry
131529406         CDS       T09350                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
omc  Onychostoma macrolepis
Pathway
omc03030  DNA replication
omc03410  Base excision repair
omc03420  Nucleotide excision repair
omc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131529406 (rfc2)
   03410 Base excision repair
    131529406 (rfc2)
   03420 Nucleotide excision repair
    131529406 (rfc2)
   03430 Mismatch repair
    131529406 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:omc03032]
    131529406 (rfc2)
   03036 Chromosome and associated proteins [BR:omc03036]
    131529406 (rfc2)
   03400 DNA repair and recombination proteins [BR:omc03400]
    131529406 (rfc2)
DNA replication proteins [BR:omc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    131529406 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    131529406 (rfc2)
Chromosome and associated proteins [BR:omc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    131529406 (rfc2)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     131529406 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    131529406 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Mg_chelatase Viral_helicase1 AAA_24 AAA_11 Rad17 RuvB_N AAA_assoc_2 AAA_19 nSTAND3 AAA_18 MipZ DNAX_ATPase_lid ABC_tran AAA_5 AAA_28 AAA_23 AAA_25 AAA_30 MeaB NTPase_1 SLFN-g3_helicase RNA_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 131529406
NCBI-ProteinID: XP_058615102
LinkDB
Position
21:14092322..14096200
AA seq 353 aa
MDVEMKETESEQSQADGPPKKDDSAPKPSTNAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggatgttgaaatgaaagagacagagagtgaacaaagtcaagccgacggaccgcctaaa
aaggatgattctgcaccaaaaccctcaacgaatgcttatgaactaccatgggttgaaaaa
tacagacctctgaagctgaatgaaatagttggaaatgaggaaactgtcagtagactggag
gtgtttgcaagagaaggaaatgtgcccaacatcatcattgctggtcctcctggcactgga
aaaacaaccagcattttgtgtttggctcgagctcttcttggtccagctatgaaggatgcg
gtgcttgagctgaatgcctcaaatgaccgtggaattgatgttgtgagaaacaaaatcaaa
atgtttgcccagcaaaaggttacactccctaaaggtcgccacaagattataatcttggat
gaggctgacagcatgaccgatggagcccagcaggctctcagaagaaccatggagatctac
tccaaaaccacacgctttgctctggcttgtaatgcatcagataagatcatagagcccatc
cagtcccgctgcgcagtgctgcgttacagcaaactcagagacgaccagatcatgatgcgc
ctgacggaggtggtagagaaggagaacttgcatgtcaccaatgacggcctagaggccatc
atcttcaccgctcaaggggacatgagacaggctctgaataacttgcagtcaacaaattct
ggatttggttacatcaacagtgaaaatgtgttcaaggtgtgtgatgagccacatcctctg
ctggttaaaagcatgctggaacactgtgtcaacgccaacattgatgaagcctacaagatc
attgagcagctttggtcactcggatactcaccagaggacatcataggaaacatctttaga
gtgtgtaagacctttcagatggcagaatatttaaagctggaatatattaaggaaatcggc
tacacgcatatgaaagtggcagaaggagtgaactctctgttacagatggctgggctgttg
ggtcgcctgtgcagcaagacggcggcacctgatgcaagctaa

DBGET integrated database retrieval system