KEGG   Onychostoma macrolepis: 131529630
Entry
131529630         CDS       T09350                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
omc  Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omc04131]
    131529630 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omc04147]
    131529630 (copa)
Membrane trafficking [BR:omc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    131529630 (copa)
Exosome [BR:omc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131529630 (copa)
  Exosomal proteins of bladder cancer cells
   131529630 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 131529630
NCBI-ProteinID: XP_058615406
LinkDB
Position
02:23897698..23909919
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENSVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQK
RSLATVKIAKVKYVVWSSDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADMDVDTP
GGEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGGGWDVEEDLDLPPELDVPSVGGGG
AEGEGFFVPPTKGTSPTQMWCNNSQLVVDHLLAGSFETAMRLLHDQVGVVQFGSYKQLFM
QTLSRGRTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG
RFEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQ
QKRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ
TRKILAACEKSLTDAHQLNYDPHNPFDICAASYTPLYRGRPVEKCPLSGACYCPKYKGEV
CRVTQVTEIGKDVIGLRVSPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgttgaccaaatttgagacaaagtcggcccgagtgaaagggctgagtttccacccgaaa
cggccctggattctggctagtttgcacaacggcgtcatccagctgtgggactatcgcatg
tgcaccctcatcgataagtttgacgagcatgatggtccagtcagaggcattgacttccat
aagcagcagccactgtttgtgtcaggaggagatgactacaagatcaaggtgtggaactac
aagctgcgtcggtgtctctttacacttcttggacatcttgactacattcgtaccacattc
tttcatcacgagtatccctggatcctgagtgcctcagatgatcaaaccattcgcatttgg
aattggcagtccagaacatgtgtctgtgtgctgacggggcataatcactatgtgatgtgc
gctcagttccatccatctgaggacctggtggtgtcggctagcttggatcagactgtgcgc
gtgtgggatatttccggtttgaggaagaagaacttgtctccgggtgctgtggacacggag
gtgcgtggcatctctggtgtcgacctgtttggggcctctgatgcagtagtgaagcacgtt
ctggagggtcacgatcgaggcgtaaactgggcagccttccatcccagcatgcctctcatt
gtgtcaggagcagatgaccgccaggtcaagatctggagaatgaacgagtcaaaagcatgg
gagttggacacttgtcgagggcactacaacaacgtgtcctgtgcggtgttccaccctcgt
caggagctcatcctgtccaactctgaggacaagagcatccgtgtgtgggacatgtccaag
aggacaggcgtccagacctttcgcagagatcacgaccgtttctgggtgctgggggctcac
cccaacctcaacctgtttgctgctggccatgacagtgggatgctggtgttcaaactagaa
agggaacgtccagcttatgccgtgtatggtaacatgctgtactatgtaaaagatcgcttc
ctgcgccagcttgacttcaacagcagtaaggatacagccgtcatgcagctgcgcagtgga
tccaaattcccagtgttcagcatgtcctacaaccctgcagaaaattctgtgctgttgtgc
accagagctaccaacctggaaaacagcacatatgatctgtactccattcccagagagagt
gactcccagaatcctgatgctcctgagggaaagcggtcctctggtctgaccgcagtttgg
gtggccaggaaccggtttgctgtactcgaccgcatgcactcactcctgataaagaacctg
aagaatgagattgtgaagaaggtccaggtaccaagctgtgaggagatcttctacgctgga
actggatccctgctgctgcgtgatgctgaaggagtcacgctgtttgacgtgcagcagaag
cgctccctcgctacggtcaaaatcgctaaagtcaaatatgtggtgtggagctctgatgcc
aaccatgtggccctgctggccaaacacgccatcatgatctgcaacaagaagttagagagc
ctgtgtaacatccatgagaacatcagagtgaagagtggcgcctgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgccctcacctccggtgatcatggtata
atccgtacattggatctgcccatctatgtgacaagagtgagaggcaacagtgtgtactgc
ctggatcgtgagtgcaggccacgagtgctcaacatcgaccccacagagtaccgttttaaa
ctggctctggtcaatcgcaaatatgaggaggttcttcatatggtgcgtaatgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggctacccagaggttgcgctgcac
ttcgtcaaagatgagaagactcgtttcagcctggctctggagtgtggaaacattgaggtg
gcgttagaggctgcaaaagccctggatgaacgtagctgctgggagcgtctcggtgaggct
gcgcttctgcagggccatcaccaggttgtggagatgtgctaccagagaaccaagaacttc
gacaaactcaccttcctgtacctcatcactggcaacctggccaaactcaggaagatgatg
aagatagctgagataagaaaggacatgagtggacactatcagggcgctctttacctgggt
gacgtcagtgagcgtgtgcgaatcctgaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggatggatgaggaggctgaagccctgaaggagacctttgacctg
gaaaaagaaatggtgccagaagtggaccccaatgcccagttgttgcagccgccacctccc
atcaaccccttggacaccaactggcctctgctcaccgtctccaagggcttctttgaggga
gccattgctgccaaaggacgtgctggccagatggttgctgacatggacgtggatactcca
ggaggagaaggctggggagaagatgcagaacttcatttggatgaagatggatttatggat
gctcaagagggattgggagatgagggagctattgggaaagaggaaggaggaggctgggat
gttgaggaagatctggacctgccgccagaactggatgtaccttctgttggcggaggtggc
gcagagggcgaaggtttctttgtgccgcccaccaagggcacaagccccacacagatgtgg
tgcaacaactctcagctggtggtggatcacttattggctggatcttttgagactgcaatg
aggttgctgcatgaccaggttggtgtggttcagtttggatcctataagcaactgttcatg
caaactctgtcccgtgggcgcacctgttatctgggcctgccgtcactgccctgcttgcac
agttacccccagagaaactggaaggacagcggggctaaagggggtctgccagcagtgggc
ctgcgtctctctgatctcatttcacgtctgcagcagtgctatcagctgaccacagcgggg
cgctttgaagaagctgttgaacgtttcagagcgattctcctctctgtaccactgcttgtg
gtcgacaacaaacaagagattgcagaggctcaacagcttatcaccatctgtaaagagtat
attattggtctcaccatggagacagagaggaagaaacttcctaaagacactctcgatcaa
caaaagagactttgtgagatggcagcatatttcacacattgcagtctgcaacctgtccac
atggtgttggtgttgagaacagcactcaatcttttcttcaaactgcgtaacttcaaaaca
gcagcgggttttgctcgccgtcttcttgagttgggtcccaaaccagaagtggcacaacag
acacgaaagattcttgcagcatgtgagaagagcctgacagatgctcaccaactgaactat
gaccctcacaatccctttgacatctgcgcagcctcttacactcccctgtaccgtgggcgg
ccagtggagaaatgtcccctgtctggagcctgctactgccccaaatacaaaggagaggtc
tgcagggtcacacaggtaactgagattggtaaagatgtgatcggcttgcgtgtcagccca
ctgcagttccgttga

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