KEGG   Onychostoma macrolepis: 131529776
Entry
131529776         CDS       T09350                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
omc  Onychostoma macrolepis
Pathway
omc03420  Nucleotide excision repair
omc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131529776 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    131529776 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omc04121]
    131529776 (cul4a)
   03400 DNA repair and recombination proteins [BR:omc03400]
    131529776 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omc04147]
    131529776 (cul4a)
Ubiquitin system [BR:omc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     131529776 (cul4a)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131529776 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131529776 (cul4a)
Exosome [BR:omc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131529776 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 131529776
NCBI-ProteinID: XP_058615681
LinkDB
Position
01:complement(46744010..46768097)
AA seq 744 aa
MAEDIQHNQKSNLNGLTKPAKSGASKKLVIKNFKDRPKLTDSYTEDTWMKLRDAVSAIQN
STSIKYNLEELYQAVENLCSYKVSPVLYKQLRQVCEDHVQAQILQFREESLDNLSFLKRM
NRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIISDGGVQSRTVEA
ILEQIEQERNGETVERSLLRSLLGMLSDLQVYKDSFEQRFLSETNRLYAAEGQRLMQERD
VPEYLHHVARRLEEENDRVISYLDLSTQKPLIATVEKQLLGEHMNAILQKGLRILLDENR
VCELTLLYELFSKVKGGLTVLLQAWREYIKSFGGEIVSSPERDKEMVQELLDFKDKMDHV
TQRCFQRNESFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEATEEELERILDK
IMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMF
KDMELSKDIMIQFKQYMQNQSDPSNIELTVNILTMGHWPSYIPMDVHLPAEMVKLQEVFK
LFYLGKHSGRKLQWQPTLGHSVLKTEFKEGKKELQVSLFQTLVLLMFNETDECSVEEIRA
ATGIEDGELKRTLQSLACGKARVLNKTPRGKDVEDGDRFHFNSDFRHKLFRIKINQIQMK
ETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPVKPADLKKR
IESLIDRDYMERDKENPNQYHYVA
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcggaagacattcagcacaatcagaaatcaaacttaaatggactcaccaaaccagcc
aaatcaggagcgtcgaagaaactcgttataaagaactttaaagacagaccgaagctgaca
gactcgtacactgaagacacgtggatgaagctcagagatgctgtcagcgccattcagaac
agcacctccatcaaatacaacctggaggagctttaccaggccgtggagaatctgtgctcc
tataaagtgtcgcccgtgttgtacaagcagctgcgccaagtgtgtgaagatcacgttcag
gcgcagatccttcagttcagggaagagtctctggacaacctgtccttcctgaagagaatg
aaccgctgctggcaggaccactgcagacaaacgatcatgatccgcagtattttcctgttc
ttggaccggacatatgtcctccagaactcactgctgccgtccatctgggatacggggctg
gagttgttccggactcacatcataagcgacggaggcgttcagagccggacggtggaggca
atcctggagcagatcgagcaggagcgaaacggagagacggtggagcgcagtctgctgcgg
agcttactgggcatgctctcagacctgcaggtgtataaggactcgttcgagcagcgtttt
ttatcggagacgaaccgtctgtacgcggctgagggtcagagactcatgcaggagagagac
gttcctgagtaccttcatcatgtagcacggcgtctggaggaagagaacgaccgtgtcatc
agttatttggatctgagcacgcaaaagccgctcatcgccacagtggagaagcagctgctg
ggagaacacatgaacgccattctgcagaaaggcctgcggatactgctggatgagaaccgt
gtgtgtgagctgacgctgctctatgagctcttcagtaaagtcaaaggagggctgacggtg
ctgctgcaggcctggagagaatacattaagagcttcggtggagagatcgtgagttctccg
gagagagataaagagatggttcaggagctgctggacttcaaggacaagatggaccacgtg
acgcagcgctgcttccagaggaacgaaagcttcatcaacgccatgaaggaagccttcgag
agcttcatcaacaagagacccaacaaacccgccgagctcatcgcgaagtatgtggactct
aaactgcgggcaggaaataaggaggccaccgaggaggagctggagaggattctggacaag
atcatgatcatcttccgcttcatccacgggaaagacgtgtttgaggccttctataagaag
gatctggccaagcgtctgctggtgggaaagagcgcttcggtggacgcggagaagtctatg
ctgtccaaactcaaacacgagtgtggagcagcgttcaccagtaaactcgaggggatgttc
aaagacatggagctctccaaagacatcatgatccagttcaaacagtacatgcagaaccaa
agtgatcccagtaacatcgagctgaccgtcaacatcctgacgatgggccactggccctca
tacataccgatggacgtccatctgcccgctgagatggtgaagcttcaggaggtgtttaag
ctcttctatctggggaaacacagtgggcgtaaacttcagtggcagcccacactgggtcac
tcagtgctgaagactgagtttaaagagggtaagaaggagctgcaggtgtctctgtttcag
actctcgtcctgctgatgtttaacgagactgacgagtgttcggtggaggagatccgcgcg
gccacaggcatcgaggacggtgagctcaagcgcacgctgcagtctctggcctgtgggaaa
gcgcgagtgctcaataaaacaccgcgtgggaaagacgtggaggacggcgaccgcttccac
ttcaacagcgacttcagacacaaactcttccgcatcaagatcaaccagatccagatgaag
gagacggtggaggagcaggtgagcacgacggagcgtgtgttccaggaccgtcagtatcag
atcgacgcggcggtggtgaggattatgaagatgaggaagactctgagccacaacctgctg
gtgtctgaactctacaaccagctcaagttccccgtcaagccggcggatctgaagaagcgc
atcgagtcgctgatcgaccgcgattatatggagcgtgacaaagaaaacccaaaccagtac
cactatgtggcgtaa

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