Onychostoma macrolepis: 131530254
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Entry
131530254 CDS
T09350
Symbol
smc3
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
omc
Onychostoma macrolepis
Pathway
omc04110
Cell cycle
omc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131530254 (smc3)
04114 Oocyte meiosis
131530254 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131530254 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131530254 (smc3)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131530254 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
131530254 (smc3)
Proteoglycans [BR:
omc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
131530254 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
131530254
NCBI-ProteinID:
XP_058616393
LinkDB
All DBs
Position
22:complement(26644191..26668262)
Genome browser
AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIXERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEREER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYSKLDQDLSEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSEDLDSLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGVDGERGS
SSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagatcagactgtggtt
gatcccttcagctccaaacacaatgttatagttggaagaaatggatcaggaaagagtaac
ttcttttatgctatacagtttgtactcagtgatgagttcagtcatcttcgtccagagcag
cgtctggctctgcttcacgaaggcactggtcctcgagtcatttcagcctttgtggaaatt
atattcgacaactctgacaacaggctgccgattgataaagaagaggtgtctctgcgccgt
gtcatcggagcaaagaaagaccagtacttcttggacaaaaagatggtcactaagaacgac
gtgatgaacctgttagagagcgctggtttctctcgcagcaacccttactacatcgtcaag
cagggaaagatcaatcagatggcaacggcgcctgactcccagcgtctgaagctcctcaga
gaggtggccggcaccagagtctacgatgagcgcaaagaggagagtatctcgctcatgaag
gaaacagagggaaagcgagagaagattaatgagctgctaaagtacatcngagagcgtctt
cacactctggaggatgagaaagaggaactggctcagtaccagaagtgggacaaaatgaga
agagctctagagtacaccatctacaaccaggagctcaacgagacccgggccaaactggac
gagttgtccagtaagagagagacctgtggagacaaatctcgacaactgcgagatgctcaa
caagatgctcgagacaaagtggaggaaaccgagcgtgtggtgagagagctgaagtctcga
atctccgccatgaaggaggagaaagaacagctgagcgccgagcgacaggagcagatcaaa
cagaggaccaaactggagctcaaagccaaagatctgcaggacgagctggcaggaaacagc
gaacagaggaaacggctgctcaaagagcgtcagaagttactggagaagattgaagaaaaa
cagaaggagctgcaggaaacagagcccaaatttaacaccgtgaaagaaagagaggagcga
ggaatttcccgactggctcaagccacacaagagcgaacagacctgtatgccaaacagggc
cgaggcagtcagttcacctctaaagaagagagggataaatggatcaagaaagagctgaag
tctctggatcaagccatcaatgacaagaaacggcagatcgctgccatccacaaagatctg
gaggacactgaggccaataaagagagaaacctggaacagtatagtaaactggaccaggac
ttgagtgaagtgaagactcgagtggaagagctggacaagaagtactacgaggtgaagaac
cgaaaagatgaacttcagagcgagagaaactacctgtggagagaggagaacgcagaacag
caggcgctggcagccaaacgagaagagctggagaagaaacaacagctactgcgagcagcc
accggaaaggctattttgaatggcattgacagcattaataaagtattggaacatttccgc
cggaaaggcatcaaccagcacgtcatcaatggttaccacggcatcgtcatgaacaatttt
gagtgtgaacctgccttctacacctgtgtggaggtgaccgctggcaccaggctgttttac
cacatcgtggaaacggatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgccaggagaggtcaccttcctgcccctcagcaaactggatgtcagggacaccgcttac
cctgagactaatgatgcaatccccatgatcagcaagctccgttacagcccaaacttcgac
aaggccttcaaacacgtgtttgggaagacgctgatctgccgcagtatggaggtgtccact
cagctggctcgagctttcaccatggactgcatcacactggagggtgatcaggtgagtcat
cgtggcgctctgaccggtggctactacgacacacgcaagtcccgtctggagctgcagaag
gacatgaggaaggccgaggaggagctcggagaactggaggccaaactcaacgagaacctg
cgtagaaatattgaacgtatcaataatgaaattgaccagctgatgaatcagatgcagcaa
atcgagacccagcagaggaagttcaaagcatccagagacagtatactgtctgagatgaag
atgctaaaggagaagagacagcagtcagagaaaacatttatgcccaagcaacgcagtctt
cagagtctggaggccagtctgcacgccatggagagcacgcgggagtctctgaaggcagag
ctgggaacagacctgctctctcagctcagtttagaagaccagcgaagagtggacgacctc
aacgacgagatcagacagctgcaacaggacaacagacagctgctgaatgagagaattaag
ctggagggaatcatgaccagggtggagacgtacctcaacgaaaacctgcgcaaacgtctc
gaccaagtcgagcaggaattgaatgaactgagagaaaccgaaggaggaaccgttctcaca
gcgacaacgtcagagttagatggcattaataaacgcataaaagacactttggctcgatct
gaggatttggactccctcatcgataagacagaggtagaaataaaggaccaccagaagagt
atggagcgctggaagaacatcgagaaggagcagaatgaagccatcaaccacgacacaaag
gagctggagaagatgaccaacagacaagggatgttactgaagaagaaagaggaatgcatg
aagaagattcgcgagctgggctccctgccgcaagaagcctttgaaaagtaccagacgctt
actctaaaacagttgttcaggaagctggagcagtgtaacacagagctgaagaagtacagc
catgtgaataaaaaagccctggaccagtttgtcaatttctcagagcagaaagagaagttg
attaagaggcaggatgagctggatagaggctacaaatccatcatggagctcatgaacgtc
ttggagctgcgcaaatacgaggccatccagctcaccttcaaacaggtgtctaagaatttc
agcgaggtgtttcagaagctggtgcctggcggtaaagccaccctggtgatgaagaagggc
gacactgaaggtggtcagtctcaggacgagggcgagggagtggacggtgagaggggatct
tcctcccagagcagcgtgcccagtgtagaccagttcactggagtgggcatcagggtgtcg
ttcacagggaaacagggagagatgagagagatgcagcagctctctggaggtcagaagtct
ctggtggctctggctctcatctttgccatccagaaatgcgaccctgctcctttctacctg
tttgatgaaattgaccaggctctagatgcccagcaccgaaaagcagtgtcagacatgatc
gtggagctggctggacatgctcagttcatcaccacgaccttcagacctgagcttttggag
tcagctgacaagttctacggcgtcaaattcagaaacaaggtgagtcacatcgacgtgatc
tcagcagagcaggcgaaggactttgtggaggacgacaccactcacggctaa
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