Onychostoma macrolepis: 131530346
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Entry
131530346 CDS
T09350
Symbol
fxr1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131530346 (fxr1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131530346 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
131530346 (fxr1)
mRNA cycle factors
Stress granule specific factors
131530346 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
131530346
NCBI-ProteinID:
XP_058616537
LinkDB
All DBs
Position
22:complement(30344041..30362534)
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AA seq
678 aa
AA seq
DB search
MEELTVEVRGSNGAYYKGFVKDVHDDSLSVSFENNWQPERQVPFNDVRLPPPADGKKEIA
EGEEVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNRNKA
VTKNTFFKCSIPVPDDLRAACESEQAHKDFKKAVGAIRIVYSPEQSELTVLSMNEATVKR
VSLLSDMHLRSIRTKLLLMSRNEEATKHLESTKQLASAFQDEFTVREDLMGLAIGSHGSN
IQQARKVPGVTAIELDEATGTFRVYGETVEAVQKARNYLEFLEDSVQIPRNLVGKVIGKN
GKVIQEMVDKSGVVRVRIEGDNDNKLPRQEVRHLKVAEKGMVPFTFVGTKENISNVQVLL
EYHIAYLNEVEQLRLERLQIDEQLRQIGMGYRPVPNRPADKDKGYATEEGTSNTHINRFY
TARGRGRRGPGYTSGYGTNSEHSNASETDSERKEELSDWSMAGEEPERNPRQQRDSRRRA
GEGRGRGRGGPGGRGRGSGRGASNSISSVLKDPDGNPYSLLDNTETDQTADTDASDSQMN
TNRRRRSRRRRTDEDTTVMDGMSESDNASLSENGLDDAEAKPQRRNRSRRRRFRPPEERQ
PVTVADYISRAESESRQRNPRDLRKNKKDMGQVDFISEHSPAEAVSNGPSKADDQSKTPQ
ASVEKTPKAKPAVVNGVS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgacggtggaggtccgtggctccaatggagcttattataagggctttgtc
aaggacgttcacgacgactcgctctccgtttcgtttgaaaacaactggcaacctgaaaga
caagttcccttcaacgatgtgcggttaccacctcctgctgacggcaaaaaggagatcgcc
gaaggagaagaagtggagatttactcgcgagcaaacgagcaggagccctgcggctggtgg
ctggctaaagtgcgcatgatgaaaggagacttctatgttatcgagtacgccgcctgtgac
gcaacctacaacgagattgtaacgttcgagcgtctccgcccggtcaaccgcaataaagct
gtgacgaagaacacgttctttaagtgcagcattcctgtgccagatgatctcagagcagca
tgtgagagcgaacaagcccacaaggatttcaaaaaggcggtcggagccattcggattgtt
tacagcccggagcaaagtgaactgactgtattgtccatgaacgaagccaccgtcaagcgc
gtctccctgctgagtgacatgcatttacgcagcatccgcaccaaactcctgctcatgtcc
cggaacgaggaggccaccaaacatctggagagtacgaagcagctggcctcggcgtttcag
gacgagttcactgtgagagaggacctcatgggtcttgccatcggaagccacggcagtaac
attcagcaagccagaaaggtgccgggagtgactgccatcgagctggacgaggcgacggga
accttcagggtttacggagagactgttgaggccgtacagaaagcaaggaattatctggag
tttctggaagattcggtgcagattcctcgcaatcttgttgggaaggttattggaaaaaat
ggcaaggttatccaggagatggtggataaatctggtgtggtgagagtgcgcatcgaaggc
gacaatgacaacaaactcccccgtcaggaagtaagacacctgaaagtagcagaaaaagga
atggtgccatttacatttgttggtacgaaggagaatatcagcaatgtacaggtcttactg
gaataccatattgcttacctaaacgaggtggaacagctgcgactggagcggctgcagatt
gacgagcagctgcgtcagatcgggatgggctacaggcccgtcccaaaccgacccgccgat
aaggacaagggctacgccactgaagagggcacatccaacacccatatcaaccgcttctac
accgccaggggccgcggccgccgggggcccggatacacgtccggctacggcactaactcc
gagcactcaaacgcctcagagaccgactctgagcgcaaggaagagctgagtgactggtcc
atggcaggagaggagcccgaacgcaacccgagacagcagagggacagcaggaggagagca
ggagagggccggggtcggggacgcggaggacctgggggtagaggccgcggctcaggaaga
ggggcgtccaactccattagctcagtcctgaaagatccagatggaaacccatacagtctg
ttagacaacaccgagacggatcagacggcagacacggatgccagtgactcccagatgaac
accaaccgtcgcagacgctcccgtcgtcgccgcacagatgaagacaccacagtcatggac
ggcatgagcgagtccgacaacgcctccctcagcgagaacggccttgatgatgctgaagct
aaaccacagcggcgcaatcgtagccgccgacgccgtttccggcctcctgaggagaggcag
ccagttactgtggctgactacatatcacgagctgaatctgagagcagacagagaaaccca
agagatctgaggaagaacaaaaaggacatgggtcaagtggacttcatatcggagcacagc
ccggctgaagccgttagcaacggcccctccaaagcagacgatcagagcaaaacaccacaa
gcttctgtcgagaagacgcccaaagccaagccagctgtcgttaatggagtctcctaa
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