KEGG   Onychostoma macrolepis: 131530728
Entry
131530728         CDS       T09350                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
omc  Onychostoma macrolepis
Pathway
omc03013  Nucleocytoplasmic transport
omc04141  Protein processing in endoplasmic reticulum
omc04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131530728 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131530728 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    131530728 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131530728 (sec13)
   04131 Membrane trafficking [BR:omc04131]
    131530728 (sec13)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     131530728 (sec13)
Membrane trafficking [BR:omc04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    131530728 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    131530728 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    131530728 (sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 131530728
NCBI-ProteinID: XP_058617146
LinkDB
Position
22:27460205..27472982
AA seq 320 aa
MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTCTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVTSITDNQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttcagtcatgaacacagtggacacctcacatgaggatatgatccatgatgctcag
atggattattacggcaccagactggccacctgctcctctgatcgctctgtgaagatcttt
gacgtcaaaaacggagggcagatcctcgtggctgatctgaggggtcatgagggtccggtg
tggcaggtggcctgggctcaccccatgtatggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaatggcacctgggacaagatgtatgaatacaca
ggccacgactcctctgtgaactctgtttgctggggaccgtatgacttcggcttgattctg
gcctgtggcagctcagacggtgccatttcagtgttgacctgctctggagacggacattgg
gatattaagaagatcaacaacgcacatacaatcggctgtaacgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaagaagaggatggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgcctacctgcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggacgtgtgacgaccctgccggtaacacctggacggccaaacttctccacaaattc
aatgacgtggtgtggcatgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtcagtggacggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgacctccatcacagacaaccagcagaacgagcag
tga

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