Onychostoma macrolepis: 131531151
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Entry
131531151 CDS
T09350
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
omc
Onychostoma macrolepis
Pathway
omc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131531151 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
omc04091
]
131531151 (frem1b)
Lectins [BR:
omc04091
]
C-Type lectins
Lecticans
131531151 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Lectin_C
Motif
Other DBs
NCBI-GeneID:
131531151
NCBI-ProteinID:
XP_058617699
LinkDB
All DBs
Position
22:18865396..18897722
Genome browser
AA seq
2152 aa
AA seq
DB search
MGVDIFALTLFTLSHLWPHVQASSLVRLNTGLRVARGQSVFVTAGELQFHMDGVSEACKV
EVVLTEPITQRVGKLTPQVFDCQFFPDEVKYVHNGSPLLDEDTAMLRVYRFTESETFVET
VLLKIHVVEPQRSLTELGNVPLVVSEFYSLSNVINSSVLTFKTQPDVICTVRLLSSEISV
PMLGQLVVEDPESMPASEPGPRRGRHTGITCPGNKACDHNTREVEFLKTDCAEFLTSGLK
YQHLSPPSPEIDYIPIRVEFRDQTSRAMLETESIWIPVLIQGAMQNQPPNAAFMSTFILE
VDQFILTPMTTAALDAKDDETPQARLIFNVTKPPAEGYITHLDDHTKTAFSFSWQDLNEM
KIAYQPPNSSHTARRNYEVEFQAIDGSFVPSPPILMHISIRTAETNAPRVSWNMGLDLLE
GQSRPITWEHLQVVDNDNIDAVTLIAMDGPLNGHLSVRGGKGFMFKVKDLREGVVVYHHS
DSDTTRDYIVFRITDGRHSIRHKFPIYVLPKDDTPPFLINSVAFEVQEGGMVRVEEYMLM
ASDLDSSDDYIQYQLITFPRAGQLVKKSSPHEPGVPVKSFLQRDLFQGLIYYKHSGEEVF
EDSFDFILSDVHQPPNLSDRHTVVIHVFPVKDQLPEEVSGTVRSITVKETEVVYITQNHL
HFRDTEHLETDLLYVITHPCFSPGNTRLPDAGRLFYTDSTNSMKKDAMVPVLKSFTQHAV
NHHKVAYMPPIEDIGPEPLFVLFVFSVSDQQGGALTGLTFNITVTPVDNQAPEMFTNLLR
VEEGGGSFLMEEHLLVQDVDSSEDQLRVHMKTHPQHGRLELQGTALLEGDSFSLQDLKAL
RVRYIHDDSETLKDSIGLTITDGINSAHGTLLVQILPVNDEPPQLGSNLRAELSCKEGGQ
VQITVEYLSATDVDSEDTRLTYMLARTPARGVLQRNGVTVDKFSQLDVLNGLIFYLHTGG
EIGPDPVSDTVTLIVSDGEAGTIDGCCQEDALPPPVPLHGTLPVYDLNITVMPVNNQVPT
ITLGTMFVVDEAASACLCGGVLEATDPDSHPDQLMFHLVTPPQYGFLENTLPSPGFEKSN
AGLRVVTFSQRHVSSGFINYVQSVHQGVEPTADFFTISVSDGIQRSAPMPFYVIINPTND
EIPSLLLSNFTVMEGGMKDLSPDILNAVDVDIPADTLTMTILLPPAHGTLVNGIYGLEMN
RYKNMNPDVLQRTLAIHSFTLQELQQGMKIMYMHDDTETLKDAFTIQLTDGGHTVQGTAC
VRIIPVNDEKPWLLKNAGIEVEAMGKRVISSVVLEAGDHDTPNDHLLYILNAGPRFGLLQ
LRTEAGWIDLSPGLNFTQEDVEMNRLWYNHTAVSGFKGHDRFHFVLSDGENTTPPQSFFI
SVRTVQKGDIALITKPVTLMEGERVILTTDILMATDSGSKPDELIYTVSVPPEHGHLHMV
QSPGVPVLSFSQMDVAANRVCYTHDNSRFADRDSFSFAVTNGVTSRSGTINLTVEHSDRI
PPTLTINKGLELTEGSMKTISTDDLKLTDPDTALENLTYVVIQSPQYGKLLLKGLPISKP
RFTQLDIINMDLAYHHLNGRAKIDRFTFQPTDGTNTGYLEYGQLKREPAVFTIQIEVLDK
TPPSIIHKGIPSTVENLPDGKQGIYITSKELRASDPDSPDDTLEFTITRPPHFGYLENVL
TGAYIKGRFTQKDLEQKAVRFVIPADMEVTADSFEFQVTDPAGNTILPEVMEFRWSRVEL
SASCYRVCENAGTLAVQVVRSGNSKDPAYISIQVEEGTAKVGKDFTHSSANLIQFDPGVN
VKMWNIYLKDDGLEENHEKFDVVLKTPKNAVLGQRNKATVEIVDPRNGRCHPDELIVEED
EKQHPVQSPPHVPEPEPPLLEEYTPDPRTGILWENYPPRGDVPYRTHFSHYSDGEHQDQE
IFHSLGQRQLRILGRNRHRAHLSEVDNRNQERVWRFHGLIPVRVEEKSPAAPAPRVHSEL
EITPIWTWPGYSADAESVETPQRDSASFITASGVQQHKSQKSVSIGCPNGWTHYRRNCYI
LGPGFASWSSAQHACMLLESELVSIHSKTDMKWMWKFAGKQSFWIGLTGGPKQWSWTDGK
LLTFSKLRKDNEEQASSAASCVLAQSQKIWIPKSCIDGSEHRYICSAPAQIS
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggacatctttgctttgacattgttcaccttgagtcacctgtggccacatgtc
caagcttcaagtctagttcggttaaacacagggcttcgggtagccagaggccagtcggtg
tttgtcacggctggtgaacttcagttccacatggacggggtatctgaggcctgtaaggtc
gaagtagttctcaccgagcctatcacgcaaagagtggggaaactcactcctcaggttttt
gactgccagttctttccggacgaggtgaagtatgttcacaatggcagcccacttctagat
gaagacactgccatgctgagggtctacaggtttacagaatccgagacttttgttgagact
gtgctgctgaagatacatgtagtagagcctcaaaggagcctcacagagcttggaaatgtt
cctctggtggtttctgagttctacagcctttccaatgtcatcaatagcagtgtccttacc
tttaaaacccagcccgatgtgatctgcacggtacgtcttctcagctctgagatcagtgtc
ccaatgcttggtcaactggtcgttgaggatcctgaatcaatgccggcttctgagcctgga
ccgagaagagggcgtcatactggaatcacctgcccaggaaataaagcctgtgaccacaac
acaagggaagtagagttcttgaagactgactgtgccgagttcctcacttcaggtctgaag
taccagcacctcagtcctccatcacctgagattgattacatcccaatcagggtggagttt
agggaccagacctcccgagccatgctggagactgagagtatctggataccggtactgatc
caaggggccatgcagaaccaacctcccaatgctgccttcatgtctacattcatcctggaa
gtagatcagttcatcctcacccccatgaccactgctgccctggatgccaaagatgacgag
acccctcaggcccggctcatcttcaacgtgaccaaacctccagcggagggatacattact
catttggacgatcacaccaaaactgcattctccttctcatggcaagacctgaatgagatg
aaaattgcctatcagcccccaaacagcagtcacacagccaggaggaactatgaggtggag
tttcaggccatcgatggctcatttgtgccgagtcctccaatcttgatgcacatctctatc
cgcactgcagagactaatgctcctcgagtctcatggaatatggggttggatctgctggaa
ggccaatccagaccaatcacatgggagcacctacaggttgtcgataacgacaacatagat
gcggtcaccctgatagctatggacggcccacttaatggacacttaagtgttagaggtgga
aaaggattcatgtttaaggtcaaggatctcagagagggcgtcgtggtctatcatcactcg
gacagcgacaccaccagggattacattgtcttccgaatcacagatggccgccacagcatc
agacacaaatttcccatctacgttcttccgaaagacgacacccctccttttctaatcaat
agcgtggcctttgaggtccaagaaggtggcatggttagggtggaggagtacatgctgatg
gcctcagacttggactccagcgacgactatattcagtatcagctgattacttttcccaga
gcaggacagctggttaagaagtcctctccacatgaaccaggtgtcccagtgaagagcttc
ctgcagagggacctgtttcaaggtctaatctactataagcactcaggggaggaagttttt
gaggactcttttgatttcatcctctcagatgtccatcagcctcctaatctatcggacaga
catactgtggtgatccacgtgtttccagtgaaggaccagttgcctgaggaagtttctgga
acggttcgctccatcacagttaaggaaaccgaggttgtttacatcactcagaaccatctg
cacttcagagatacagagcatttggagaccgacctattgtatgtgatcactcatccttgc
tttagcccgggaaacaccaggttaccagatgcaggcaggctgttttataccgacagcaca
aactccatgaaaaaagatgcaatggttccagtgctcaagtcctttactcagcatgcagta
aatcaccacaaagtggcttacatgcctccaatagaggatattggccctgagcctctcttt
gtgttgtttgtgttttctgtgagtgaccagcagggcggcgctctcacaggactcaccttc
aacatcacagtcacacctgttgacaaccaggccccagaaatgttcactaacttgctgagg
gtcgaggaaggtggcggtagtttcctgatggaggaacacctgctggtgcaggatgtggac
agctcagaagatcagctcagggtacacatgaagactcatccccaacatggaagactggag
ctgcagggcacggcactgctagagggagacagcttcagtttgcaggacctcaaagcattg
agggtcagatacattcatgatgactctgagaccctgaaagatagcattggtcttactatc
acagatggaatcaactctgcacatggaacgcttttagttcagatcctgcccgtgaacgac
gaacccccacagttaggctccaacttgagggctgaactgtcctgcaaagaggggggtcag
gtccagattacggttgagtacctctctgctacagatgttgacagcgaggacactcggcta
acatacatgcttgccagaacacctgcacgtggagtgctgcagcgaaatggggtcaccgtg
gacaagttctcccagctggatgtgctcaatggactcatcttctacctgcacacaggtggt
gagattggacccgatcctgtctcggacactgtcactctcattgtgtcagatggagaggct
ggaacaatagatggctgctgccaggaggatgctctccccccacccgtccccctgcatggc
acgcttccggtctatgacctcaacatcactgtgatgcctgtcaacaaccaggtcccaacc
ataacgctgggtaccatgtttgtggtagatgaggctgccagtgcatgtctgtgtgggggg
gtgttggaggcaaccgatcctgatagtcatccagatcagctcatgtttcacttggtgacc
ccaccacaatatgggttcctggagaacactcttccatcccctggctttgagaaaagcaat
gctggacttcgagtggttactttcagccagcgtcacgtcagttcgggtttcatcaactat
gtccagtcagtgcaccagggtgtagagcctacagcagacttctttaccatcagtgttagt
gatgggattcagagatcagcaccaatgcccttctacgtcatcatcaaccctaccaatgat
gagatcccatcactgctgcttagcaactttacagtcatggagggagggatgaaagacctc
agtcctgatattctaaacgcagtggatgttgatattccagcagatactcttaccatgacc
atcctgcttcccccagcccatggcacactggtcaatggcatatatggtcttgagatgaat
cgctacaaaaacatgaaccctgacgtcctccaacgaaccttagcaatccactctttcacc
ttacaggagctacaacaaggaatgaagatcatgtatatgcacgacgacacagaaaccctc
aaggacgctttcaccatacagttgacagatggtgggcacacagtccaggggactgcgtgt
gtccgcatcataccagtcaatgatgaaaagccatggctactaaaaaatgcaggcattgag
gtcgaggccatggggaagagagtcatctccagtgtagtgttggaggcaggggatcatgac
actcccaacgaccatcttctctacatcctcaatgcaggtcccagatttggcctccttcag
ctaaggacagaagctggatggattgatctgagtccaggtctgaatttcacacaggaggat
gtggagatgaatcgcctatggtacaatcacactgcagttagtggtttcaaaggccatgac
aggtttcactttgttctcagtgatggggaaaatacaacacctccacagagtttcttcatc
tctgtccgcactgttcagaagggtgacattgctctgatcactaaacctgtgaccttgatg
gagggagagagagtcattctgaccactgacattctgatggccacagacagtggaagcaag
ccagatgagctcatatacactgtatcagtcccgcctgaacatggtcacctacacatggtc
caaagtccaggggttccagtgctctccttctcccagatggatgtggctgccaaccgggta
tgctacactcatgacaacagccgttttgctgaccgtgattctttcagctttgctgttacc
aatggtgtgacatccagaagtggtaccattaatttaactgtggaacacagtgaccgtatc
ccaccaaccctgactatcaacaaaggccttgagctcacagagggctctatgaagaccatt
tccactgatgatctgaaactgactgatccagacacagctctggagaatctcacctacgtc
gttattcaaagcccacaatatggaaagttgctcttgaaaggattacccatctccaagcct
cgtttcacgcaactggacatcatcaatatggatctagcttaccatcatctgaatggacgg
gccaagatcgacaggttcacctttcagcctactgatggaactaacacaggttatttggag
tacggacagctgaagagagaacctgctgtttttaccatacagatagaggtattggacaag
accccacccagtattatacacaaagggattccaagtactgtggagaatcttccggatggt
aaacagggcatctacatcacctccaaagagctgcgcgcctcagatccagacagtcccgac
gacacactcgagttcaccatcacaaggcctccacacttcggttaccttgaaaatgtcctc
acaggtgcctatatcaaaggacgctttacccagaaggatctggagcagaaagcagtgcgc
ttcgtcattcctgcagatatggaagtgacagcagacagctttgagttccaagtcacagat
cctgcaggaaacaccatacttcctgaagtgatggagttcaggtggtctcgtgtggagctg
tcagcttcctgttatcgtgtttgtgagaatgcaggaactctagctgtgcaggtggtgcgc
agtgggaacagcaaagatccggcgtacatcagcatacaggtggaagaaggaacagccaaa
gtggggaaagacttcactcacagttctgccaaccttatacagtttgatccaggtgtaaat
gtcaaaatgtggaacatttacctcaaagatgacggactagaagagaaccatgagaaattt
gatgtagttctgaagaccccaaaaaatgctgtcttgggacagaggaacaaggccacggtt
gagattgtggatcctagaaatggcaggtgtcatccagatgagcttattgttgaagaagat
gagaagcaacatcctgtccaaagcccaccacacgtcccagagcctgaaccgcccttactt
gaggaatacactccagacccaagaacaggaatcctttgggagaactatccaccaagaggg
gacgtcccatatcgcacacacttcagccattacagcgatggagaacatcaggaccaggag
atctttcacagtctgggccaaagacagctgaggattctgggtagaaacaggcacagggca
catctgtcagaggtggacaacagaaatcaagaaagagtttggagatttcatggactgatt
ccagtgagagtggaggaaaagtcaccagcagcaccagcacctcgtgtccactctgaactg
gagatcactcccatctggacctggcctggatattctgctgacgctgaatcagtagaaact
ccccagcgtgactcagcctcttttataactgcttcaggagtacaacagcacaagtctcag
aagtctgttagtattggttgtcctaatggctggactcactaccggaggaactgctatatt
ttggggcctggttttgctagctggagcagcgcacaacatgcttgcatgctgcttgaaagt
gaattggttagtatccactccaagactgatatgaagtggatgtggaagtttgctggaaag
cagtcgttctggattgggctcactggcgggccaaaacagtggtcgtggacggatggaaaa
ctgctgacattctccaaactcaggaaggataatgaggagcaagccagctctgctgccagc
tgtgttttagctcagagccagaagatatggattcctaaaagttgcatcgatggatccgaa
cacagatacatttgttcagcacctgcacaaatcagttaa
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integrated database retrieval system
