Onychostoma macrolepis: 131531768
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Entry
131531768 CDS
T09350
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
omc
Onychostoma macrolepis
Pathway
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131531768 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131531768 (hbs1l)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131531768 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
131531768
NCBI-ProteinID:
XP_058618779
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All DBs
Position
23:10997283..11023574
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AA seq
683 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEEDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLEEAE
YEVEEEEMPTSPTIAGTLDPLQQGRLYSCLDQMRAVLGDSIPDSTLTQAALKYDCDPHRA
LDFILTEENTNTHAPTARTNPQPEPITTAAPQKAKAREASESRVEAEVVPKVARMTVSGK
KQTMGFDVRSAEENGVVAPSVRRGPSPEVTAAPTTETPSKPSAVNEDSAAPTPTRPAGKS
KQQLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQEAKK
AGKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
VSKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSKVADLTAWYTGPCLLEQIDAFKPPQ
RSVEKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKVLAMPPNETCTVKGITLHDEAL
DWAAAGDHVSLTVTGMDIIKINVGCIFCDPKEPIRTCTRFRARILLFNIEFPVTQGFPVL
LHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKE
LGRFMLRYVGSTIAAGVVTEIKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcacaggaatgtccgaggttataactacgacgaagactttgaggaagatgac
atgtacgggcagtcagtggaagatgactactgcatctctcctgccactgccgcacagttt
atctactcgcgtcaagactcaaggcaggctcgacatgtagagaccctggaagaggcagaa
tatgaggtggaggaagaggagatgccaacgtctcccaccattgcaggcacactagaccca
ctacaacaaggtcggttgtattcctgtttggatcagatgagagctgtgctgggagattca
attccagactccacactgactcaggcagctctgaaatatgactgtgaccctcacagagcc
cttgattttattctaactgaggagaacaccaatacacacgcccctacagccagaaccaac
ccacagcccgagcctatcaccacagctgcaccacagaaagctaaagcacgggaggcttca
gagagtcgtgttgaagcagaggttgtcccaaaggttgcccgcatgactgtgtcaggcaag
aagcagaccatgggctttgatgtgcgaagtgcggaagaaaacggcgttgttgccccgtca
gttcgcagagggccgagtccagaggtcaccgctgcaccaaccacagagaccccatccaaa
ccatcggctgtgaatgaagactctgccgccccgaccccgactcgaccagctggaaagagc
aaacagcagctcaacatccgtgctgaactggagaagagacaaggaggaaaaccgttactc
aacctggtggtcataggtcatgtagatgctggtaagagcactctcatgggtcatctgtta
tatctgctggggaacgttaataagagaaccatgcataaatatgagcaggaggccaagaaa
gctggcaaggcctcattcgcttatgcatgggtactggacgagacaggagaggagagagac
agaggagtgaccatggatgtgggcatgacaaagtttgagaccgactcgaaggttataact
ctcatggatgcaccaggacacaaagacttcattccgaatatgattacaggggctgcacag
gcagatgtggctgtgttagtcgtagatgccagtcgtggggagtttgaggccgggttcgag
gcgggggggcagacccgcgagcacggcctgctggttcgatccctcggagtcacgcagctt
gccgttgctgtcaacaagatggaccaggtgaactggcagcaggagagattccaggaaatc
gtctcgaagctcggtcactttctgaagcaggctggttttaaggattctgatgtgttttac
atccctaccagcggtctatcaggagagaatctgactactaggagtaaagttgcagatctt
acagcctggtacactggaccttgcctactggaacagatagatgcatttaaaccaccccag
aggtcagtggagaagcctttcaggctttgtgtctcagatgtcttcaaagatcagggatct
gggttctgtgtgactgggaagatcgaggctggcttcattcagacaggagataaagttctg
gccatgcctcctaatgagacctgcacggttaaagggatcactctccatgatgaagcttta
gactgggcagctgctggtgatcatgtcagtctaactgtaactggcatggacatcatcaaa
ataaatgttggatgtatattctgtgatcccaaagagcccatcagaacctgtacaagattc
cgagcaagaattctcctctttaatatagaatttcccgtcacgcaaggcttccccgtactg
ttacattatcagaccgtaagcgaaccggccactattaggaagttagtcagtgtattacac
aagagcagtggagaagttctcaagaagaaaccaaagtgtttgagtaaaggacagaatgct
gtggtggagattcaaacacagaggcctgtggctctggagctctataaggactataaagaa
ctggggcggttcatgctgagatatgtgggctcgaccattgctgctggagttgtcacagag
atcaaagagtaa
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