Onychostoma macrolepis: 131532006
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Entry
131532006 CDS
T09350
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04110
Cell cycle
omc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131532006 (smc1a)
04114 Oocyte meiosis
131532006 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131532006 (smc1a)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131532006 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
131532006 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
131532006
NCBI-ProteinID:
XP_058619275
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Position
23:complement(12763019..12774232)
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AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYCEDNGDECTFTRVIIGSSSEYRINSKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTTLFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNEAEIEKLNR
ELSQRNREIEKDRKKMDHVEEELKEKKKELGRMMREQQNVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELDREQGAVEMARQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFCPRINDIKRIIQSRERDITELRDRMNLVEDEVFVEF
CLEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVTMWEQ
TVKKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQGEGSSQVE
DSISSAKASSSVHAKEALIEIDYSNLNEDLKDSLSEEEIKAEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNTSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYLDANPNPND
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttaaaactgatcgagattgaaaatttcaaatcttacaaaggacgtcaaata
atcggaccgtttcacaaatttacagcaataatcggcccaaatggatctgggaagtcaaac
cttatggatgccatcagttttgtattagcagagaagaccagtaacctgcgtgttaaaacc
ctgaaggatctcattcatggagcaccagttggaaaaccagcagccaaccgtgccttcgtg
agcatggtttactgcgaggacaatggggatgaatgcaccttcacacgggtcatcattggt
tcctcctcagagtaccgaatcaacagtaaggtggtcgggctttcagactacagtgaggag
ctggaaaaactgggtattctaattaaggccagaaattttcttgtgttccagggtgcagtg
gagtccatagccatgaagaatcctaaagagaggaccactttgtttgaggagatctcccgc
tctggtgagctggcccaggaatatgaccgcagaaagaaagagatggtgaaagctgaagag
gacacacaattcaactatcaccgtaagaagaacatcgcagcagagcgcaaagaagccaaa
caggaaaaagaggaggctgagaggtaccagagactgaaggatgaggtggtcagggctcac
gttcagctacagctctttaaactctaccataacgaggcggagatcgagaagctgaaccga
gagttgtctcagcgcaaccgtgagattgagaaggacagaaagaagatggatcatgtagag
gaagagctcaaggaaaagaagaaagagctgggaagaatgatgagggaacagcagaatgtg
gagaaggagataaaagagaaagatgctgagctgaaccagaaacggccacagtatatcaaa
gccaaggagaacactgcccataaaattaagaagctggaggtggctcgaaaatccttgcag
aatgcacagaagatgtacaagaagcggaaggcagacatagaggaactggaccgtgagcag
ggtgccgtggagatggcgaggcaggagtttgaggaacggatggaagaggaggcacagagt
caaggccaagatttgacactggaggagaaccaggtgaagcagtatcacaggctaaaggag
gaggccagtaagcgggcagctactttggcgcaggagctagaaaagtttaacagggaccaa
aaggctgaccaggaccggctggatctggaggagaggaagaaaattgagacagaggccaaa
ataaaacagaagattcgtgagattgaggagaaccaaaagcgcattgaaaagctggaagac
tatattgcaaccagcaggcagtctctggatgaacagaggcgtatggaagaggaactgact
gaggaagtggagctggccaaaagaaggattgatgagataaacatggagttaaaccaagtg
atggagcaacttggagatgctcgtattgacaggcaggagaacagccgtcagcagcgcaaa
gctgaaattatggagagcattaaacggctttaccctggctcagtgtacggcagactgatc
gacttatgccagcccacccagaagaagtaccagattgcagtgaccaaagtcctgggaaaa
aacatggacgccattattgtggactctgagaaaaccggcagagattgcatccagtacatt
aaagagcaaagaggagaaccagagacctttctgcctcttgactatttggaggtgaaaccc
acagatgagaaactgagagagcttaggggggcaaaactagtgatcgatgtgatccgctat
gagccgccacatataaagaaagcccttcagtatgcctgcggcaatgctttagtgtgtgag
aatgtggaggacgctcgcaggatcgcctttggaggaccataccggcataagaccgtggcc
ttggatggaactctcttccaaaagtcaggtgtgatctctggtggagctagtgacctgaaa
gcaaaggctcggcggtgggacgagaaagctgtggacaaacttaaagaaaagaaagagaaa
ctaacagaggaattgaaggaacaaatgaaggcaaagagaaaggaggcagagctcaggcag
gtccagtctcaggctcacgggctgcagatgagactgaaatactctcagagtgatctggaa
cagacaaaaacccgccacctctcactgaacatgcaggagaaatcaaagttggagagtgag
ctggcaaatttttgcccacgaatcaatgacatcaaacgaatcatccaatcacgagagagg
gacattacagagttaagagaccgcatgaacctagtggaggatgaggtctttgttgaattc
tgcctagagatcggtgtgcgaaatatcagagagtttgaagaggaaaaagtaaagaggcaa
aatgagattgccaaaaaacgactggagtttgagacacagaagacacgtctggccatccag
cttgattatgagaagaaccagttgaaggaagaccaggagaaagtgacgatgtgggagcag
actgtaaaaaaggatgagaatgagattgaaagacttaaaaaggaggaacacaggcacatg
aagatcattgatgagacaatggcacagctacaggacctgaagaaccagcatcttaccaag
aagggagaggtaaatgacaagaaccgagagatggaggagatccgcaagaaactaggatct
gccaacaaagagctgactcagctgcagaaggaagtaactgccattgaaaccaaactggaa
cagaaacgcagtgacagacacaacttgttgcaagcctgcaagatgcaggacatcaaactg
cccctcaaatcagggacaatggatgacatcagccagggagagggaagttcgcaagttgag
gattcgatcagcagtgcgaaggcatcaagctctgttcatgccaaagaggccctcatagag
attgactacagcaacttgaatgaggacctcaaggattctttgtcagaagaagagatcaag
gcagagatgaacaccctacagcagaggctgaacgagcagcagagcatcctgcagagaatc
agcgctcccaatatgaaggccatggagaaactcgagagtgttagagacaagttccaggag
accagtgatgagtttgaagctgctcggaaaagagcaaagaaagccaaacaggcgtttgag
cagatcaagaaggagcggtttgaccgtttcaatgcttgtttcgagtctgttgccaccaac
attgatgagatctacaaagcactgtcacgtaacaccagtgcacaggcattcctggggcca
gagaacccagaagaaccatacttagatggaatcaactacaactgtgtggctccaggaaag
agattcaggcccatggacaacctgtctggaggagagaaaacggtggcagctttagctctt
ctttttgcaattcacagctacaagcctgcacctttctttgtcctagatgagattgatgct
gcactggataacaccaacataggcaaggtggctaactacataaaggaccagtcagtccag
aatttccaggcaattgttatctctctgaaagaggagttctacacaaaagctgactcactc
ataggagtttaccctgagcaaggagattgtgtcatcagtaaggtgctgacctttgatctt
tcccagtatctagatgccaatcccaatcctaatgattag
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