Onychostoma macrolepis: 131532628
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Entry
131532628 CDS
T09350
Symbol
ube4b
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
omc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131532628 (ube4b)
04120 Ubiquitin mediated proteolysis
131532628 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131532628 (ube4b)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131532628 (ube4b)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
U-box type E3
131532628 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
131532628
NCBI-ProteinID:
XP_058620436
LinkDB
All DBs
Position
23:12234615..12259020
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AA seq
1350 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGASSQPVPPAP
SHTLGLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSSSDVSEEQALHLICKILRVS
WKEQDRDVIFLPSLAAEFQKNPRDVYSDFKDLIGQILMEALMMSTRSRDCNPFASLTATS
QPITAARSPDRHLTLVPPSSQSGSPMMPCAGSFGASSLSSLYGCSPNPLALSSARMSAPS
VPLASAAALPVPXSPPVSRPPTSLPLPSPSAPLPISQRYRPYSLSSSIPISPSPRSTPSG
MLTPPTTSGIPSSPSPRHHSTHTSMPLPILPGSPSTMARRTALAARMPSSPFSLLFFALS
DLPQDSSDEELEEEEEEDFSRVQFGSSLGASGGGIAGDSGSDRFTIESCKETEMLNYLIE
RFDSVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPSLLVPYM
LCRNLPYGFIQELVRMTHQEEEVFKQIFGPILQGLVFAVKECSFDSDNFKFPLMALAELC
EIKFGKTHPVCSLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKYF
SGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKA
QMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHPKCRLNVSTEETRLKATME
DLXSWLAELHEDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEE
LKNSENQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQ
LILRMVEPAFPHVTLPLNPEIPKSFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTEDIV
TFLVVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEIMENHPLSVNQLVPALMK
FYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLIN
DTTFLLDESLESLKRIHEIQEEMKNKEQWDQLPREQQQSRQSQLTQDERVSRSYLALATE
TVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLL
DQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVE
EIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRAIILRHLLNSPTDPFNR
QPLTESMLEPVPELKERIQAWMKEKQSGRV
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcgactggcccggttagctggaggg
cagacgtcacagcccagcacccccctcagtacccctttgacatccccacagagagaaact
cccccaggacccttgccagggccctccggggcctcatcacagcctgtcccaccagctcca
tctcacactctgggcctaaatgcacaaaatgtcacccctgccacctctcctatgggggcc
tcaggggttgcttaccgcagccagagcagcgaaggggtcagctctctctccagctctcca
tctaacagtctggagacacagtcccaatccctgtcccgctcccagagcatggacatagac
actgcctcctgcgagaagagcatgtcccaagtagatgtggactcaggaattgagaatatg
gaggtggaagacagtgatcgcagagagaaaaggaacctggctgaaaaggattcctcatcc
agttctgacgtctctgaagagcaggctttacacctcatctgtaagatcttgcgtgtctct
tggaaggagcaggaccgtgatgtcatctttctcccctcacttgctgctgaattccagaag
aaccctagggatgtttactctgacttcaaagacctgattggacagattttaatggaggct
ctcatgatgtccacccgttcgcgtgactgtaacccattcgccagcttgaccgccacatct
cagccaattaccgctgccagatccccagaccgtcacctgactcttgttccaccctccagc
cagagcggcagtcccatgatgccctgcgctggttcattcggtgccagctctctttccagt
ctttatggttgtagcccaaacccactcgctctgagctctgccagaatgagtgctccatct
gtcccactggcttctgcagccgccctcccggttcccncaagtcctcctgtctctcgccct
cccaccagcctgccacttccctctccatccgcccctctgcccatctcccagagatacagg
ccctactcccttagctcgtccatccccataagcccaagccccagatctactccatctggt
atgcttaccccccctacaacttcaggtataccctccagcccttcccccagacaccatagc
acccacacctccatgcctttgcccatcctccccggctctcccagcactatggccagaagg
actgcgctagctgcccggatgccctctagccctttctccctcctcttcttcgccctgtcc
gacttgcctcaggacagcagtgatgaagagctggaggaagaggaagaggaggatttttca
agggttcagtttgggtccagcctgggtgcatccggaggggggatagctggtgactcaggt
agtgaccgctttaccattgagtcctgtaaagagacagagatgctcaactacctcatcgag
cgttttgacagtgtgggaatggaagagaggaaggccccaaagatgtgcagccagccagct
gtcagtcagctgcttagcaacattcgttcccagtgcatttcccatgctgcactagtgctt
caaggtgccctcacacagcctagggcccctctacagccctccctgctggttccatacatg
ctgtgccggaaccttccgtacggcttcatccaggagttggtgcgcatgactcaccaggag
gaggaggtgtttaaacagatctttggtcccattcttcaagggctcgtttttgctgtaaaa
gaatgttcttttgacagtgacaacttcaagttcccactgatggctttggctgagctctgt
gaaatcaagtttgggaagactcaccctgtgtgcagtttgatcacctctctgccgttgtgg
tgtcctgaccctctcagtcccgggacaggaagagaaattcaaagactctcctttcttgga
gcgttcttcagtctttctgtgtttgctgaggatgacactaaagtgggagacaaatacttc
tcaggccctgccatcactatggagaacacccgtgtggtcagccaatcactgcagcattat
ctggagtctgcgaggggagatctgtttaaaatcctgcacaacatcttgttgaacggagag
acaagggaagcagctctgagctacatggcagctctggtgaatcgtaatgtgaagaaggct
caaatgcagactgatgataagctggtgtccacagacggtttcatgatgaacttcctgtgg
gtgctgcagcaactcagtatgaagatcaagctggaaacagtggatcctctctacatcttc
caccccaagtgtcggctgaatgtcagcacggaagagacccggctcaaagccacgatggag
gacctanagagctggctcgctgagctgcatgaagacccgtccaagttctcagagcccaag
ttccctacagagtgcttcttcttaacgctacacgcacatcatctgtccatcctcccgtgc
tgtcggcgctacatacggaggctgagggccatcagggatctgaacagaactgtggaagag
ctgaagaacagtgagaaccagtggaaggattccccgttggcaagtcgtcatcgggagatg
ctgaagagatgtaaaacacagctgaagaaactggtgcgctctaaagcctgcgcagacgca
gggctgctggacgagaacctgctgcgcagatgtctgcagttcttcagtatggtcatccag
ctcatcttgcgtatggtggagcctgccttcccacacgtaaccctgcctctgaacccagaa
atcccaaaaagctttgcagcactgccggagttttacattgaagatgtggccgagttcttg
ctttttattgtgcagtactttccacaggttctctatgagccgtgcactgaagacattgtg
accttcctggtggtcttcatttgcagtcagaattacataaagaacccatacttgattgcc
aagctggtggaggtgctatttgtcaccaaccctgcagtgcagccgcgcactcaacgtttc
tttgagattatggagaaccacccactgtctgtcaatcagcttgtgccagccctcatgaag
ttttacacagatgtggagcacactggagccacaagcgagttctatgacaagttcacaatt
cgttaccacatcagtaccatattcaaaagcctatggcaaaacattaaccaccaaggtacc
ttcctggaggagttcaactctggtaaacagtttgtgcgctacatcaacatgctaattaac
gatacaacttttctgctggacgagagtttggagtctctgaaacgcatccatgagatccag
gaggagatgaagaataaagagcaatgggaccagctgcccagggagcagcagcagagccga
cagtcccagctgactcaagatgagagagtatcacgatcgtacctggctttagcaacagag
acagtggatatgttccatatcctcaccaaacaggtccagaagcccttcctcaggcctgaa
ctgggtcctcgtctggctgccatgttgaattataacctgcagcagctatgtgggcctaaa
tgtcgagacttgaaggtggaaaacccagaaaaatatggttttgagccaaagaagctcctg
gatcagctcactgacatttatctgcagctggactgtgcccgatttgctaaagccattgca
gatgaccagcggtcatacagcagggagctgtttgaggaggtcatttcaaaaatgagaaaa
gcaggcataaaatccaccattgctattgagaaattcaaactgctgttggagaaggtggag
gagatagtagcccgcaattctcagtctgagatggattacagcgatgccccagatgagttt
aaagacccactgatggacactctcatgactgatcccgtgcaacttccctctggcaacatc
atggatcgagccatcattctgcgacacctcctgaactctcccacggaccccttcaacaga
cagcctctcaccgagagcatgctggaaccagtcccagagctgaaggagcgtatccaggcc
tggatgaaagagaagcagagtggccgtgtttga
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integrated database retrieval system
