Onychostoma macrolepis: 131532885
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Entry
131532885 CDS
T09350
Symbol
abca4a
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4a
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
omc
Onychostoma macrolepis
Pathway
omc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131532885 (abca4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omc02000
]
131532885 (abca4a)
Transporters [BR:
omc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
131532885 (abca4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
131532885
NCBI-ProteinID:
XP_058620667
LinkDB
All DBs
Position
24:complement(8044693..8078936)
Genome browser
AA seq
2308 aa
AA seq
DB search
MGTNSQVQLLLWKNWTVRKRQKTRLLMEIMWPVVLFIGLVWLRRANPLYRQHECHFPNKA
MPSTGILPWIQGIFCNANNPCFQHPTRGESPGLVSNYNNSILARFWEDAQELLFEDTEFL
QLGRLWQELVSMSNFMDALRTNPELIAGRGVKVEDILKDDETLTSYLLRDVPLTESVVDQ
LVRSQIRPEQFAYGVPDLHLKDIACSQTLLERFLIFPSRWGLYAVRNAMCVLTPQRLQII
EDKFYANLDFFKLFRLLPLVLDNYSNGLDLHFWARLLSAVSEKLKALFERPSSQDLLQVI
SPLLQSHDSPSFSQLMAATSSLFCGYTEGAFSRVTSFNWYEDNNYKAFLGINSTRGEGKY
NYDHTATPFCNDLMKDLESNPVTRIVWSSVKPFLMGKILYAPNSPAVRQIIKNANTTFEE
LERLRNMGRAWEEVGPQVWSFFQDGVQMNMLRDSIRNPTMMDYINKGLKDTPFTGQHILN
FLYNGPEEDRDLDMPNFDWRNIFNVTDQVIRLINRYGECLVLDKFSAISDEDQLTHRALD
LLGESKFWAGLVFVDMYSWTTKVPPHVKFKIRMDIDVVERTNKIKDRYWDPGPRADPMDD
LRYIWGGFAYLQDMIEHGIIKTHTGKEWPLGVYLQQMPYPCYVDDLFMLTLNRCFPIFMV
LAWVYSVSMTVKSIVLEKEMRLKETLKAMGVTNRVLWCTWFIDTFFMMASSTALLTLIIM
GGKVLNYSNPIILFLFLLTFTTATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHIVCF
AWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSLLEGDEFSFLISI
IMMVLDTVLYGVLAWYLDNVFPGQYGIGRPFYFPIQPSYWLNRPEPLKQVPGKPAVEKPA
FDNLVNHTDDQAKNHTAPEKPPEPPGSCKHGDIREKLEKEKEPKRVDEEETTNKSMSTDS
SGRLFFEPEPSGLVVGVCVENLYKMFSGSSRPAVDGLSITFYEGQITAFLGHNGAGKTTT
MSILTGMFPPTSGTAFIYGKDIRTDMDAIRKSLGMCPQHNIIFHHMTVAEHILFYSLLKG
RPLPEAQLEVENMLEDLGLPHKRNEEAQNLSGGMQRKLSVAMAFVGGAKVVFLDEPTSGV
DPYSRRSIWDLLLKYRAGRTVILSTHHMDEADLLSDRVAIISQGRLYCCGSPLFLKSCLG
AGFYLTLVRRIKEQPSHVRNEAQCDCTEDCSCKCSLCTKFKESTEEQPRVTERQMEGDVD
SITALIHHHVPEASLIEVIGQELTFLLPSRGFKHRSYASLFRELEETLADMGLSSFGVSD
TSLEEIFLKVTADGGAAHINPTSDTDRLVYANGQTNAGSSTSKDGRGSHQVKGIFLVLKQ
FFALVIKRFHHTTRSSKDFLAQIVLPASFVLVSLMFTLIVPPFGEYPSLTLSPWMYGRQF
TFFSNEQTQSPDMRYFGEVLLNRPGFGTRCMVDEPLVDYPCNNITTEWEMPLVNPALIEM
LGNPEWTDISPSPSCQCSTPNKLTMLPVCPEGAGGLPPPQRIQSTGDVLTDLTGRNISDY
LVKTYTNLIRTSLKSKYWVNEQRYGGISVGGLLPVLDVDPKTIQNAAAQLGRLLNVTGGR
YSKLTLQEFGTFLRYMETENNVKVWFNNKGWHAMVAFMNVANNAILRANLPPGADLNEYG
ITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVTQAKHLQ
FVSGVSPLVYWIANFFWDMINYAVSAAMVVGIFIAFDKKCYTSPGNLQALIALLMLYGWS
VTPMMYPMSYVFNVPSTAYVSLSCINLFIGINSSAITFILDLFDSTEALYKCNQVLKKAL
LVFPHFCLGRGLIDMAMNRAVMDVYARFGEDFSLDPFSWDFVGKNVTFMAIEGFVYFILN
VLIQYRFFLDHWMSDFKXPPITDEDLDVAKEREKVYKGGSSSDILQIKDLSKTYTGTIRP
AVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDIDVTSGEAVVTGYSILTNILDVHQN
MGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISRVAEWGIQKLGLFEYAGCTAGTYSG
GNKRKLSTAIAMIGCPALLLLDEPTTGMDPHSRRFLWNSIMSVIQGGRAVVLTSHSMEEC
EALCTRLAIMVNGTLKCLGTTQHLKYKFGDGYVVTMKITAAKAGTVPDLNPAEAFMESTF
PGCIQREKHYNTLQYEIASSSLAKIFQLVLANKEMLNIEDYSVSQTTLDQVFVNFAKQQS
GEDDAIVLHPRAAGARRDMRVFPVKTKA
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaacagccaggtgcagctgctcctctggaaaaactggactgtccgcaagagg
cagaagacacggctcttaatggagattatgtggcctgtggtgctattcattggactggtt
tggctgagaagagcgaaccccctttaccgccaacatgaatgtcacttcccaaacaaagcc
atgccctccactggcatccttccatggatccaagggatcttctgcaatgctaacaacccc
tgtttccagcacccaacccgtggagagtctccaggcctggtgtccaactacaacaactca
atactggctcggttttgggaggacgcacaggagctgctgtttgaagatacagaatttctg
cagttgggacgattatggcaggaactcgtgtccatgagcaacttcatggatgccctccgg
accaatcccgaactaatcgcgggtcgaggtgtgaaagtggaggatattttgaaggacgat
gaaactctcacttcatacctgctcagagatgttcctctcacagaatctgtggtagatcag
ctggtccgttcacagatccgccctgaacagtttgcatatggtgttcctgatctccatctg
aaggacatcgcctgcagtcagactcttcttgagcgtttccttattttcccgagccgttgg
ggcctgtatgccgtgcgcaatgccatgtgtgttctcaccccgcagcgtcttcaaatcatt
gaggacaaattctatgccaatcttgacttcttcaaacttttccgcttgcttcctctggtt
cttgataactactccaatggactcgacctgcacttctgggcccgacttctgtctgccgta
tctgagaagctaaaagcgctgtttgaaagacctagctctcaagacctgttgcaggtgatt
tctccactgcttcagtcccatgattccccatctttcagccaactcatggccgccacctcc
agcttattctgtggctacacggaaggggccttttccagggtcacctccttcaactggtac
gaggataacaactacaaagcctttttgggcatcaacagcacacggggagaggggaagtac
aactacgatcacacggccactccgttctgtaatgacctcatgaaggatttggagtccaat
ccggtcacaaggattgtgtggagttcagtcaagcctttcctgatgggcaaaatcctgtac
gctcccaattcccctgctgtcagacagatcattaaaaacgcaaacaccacctttgaggag
ttagaaagacttaggaatatgggtcgggcctgggaggaggtgggcccacaggtgtggagc
ttctttcaggatggtgtacagatgaacatgcttcgggactccatcagaaatcccacaatg
atggattatatcaacaaaggcctcaaagacactccattcactggccaacacatcctcaac
ttcctgtacaatggccccgaggaggatcgagatctggacatgcctaattttgactggcgg
aacatctttaacgtgactgaccaagttattcgccttataaaccgatatggagagtgtcta
gtcctggacaagttctctgccatttctgatgaggaccagttgacccatcgagcgctggac
cttcttggagagagcaagttttgggcagggctggtatttgttgacatgtactcttggacc
accaaggtgccccctcatgttaaattcaagatccgcatggacatcgatgtcgtggagcga
actaacaagatcaaagacagatactgggatccagggcctagggctgatcccatggatgat
ctgcggtatatatggggaggatttgcctacctgcaggacatgatagaacatggaataata
aagacccacacagggaaggaatggcctttaggagtctacctgcagcagatgccctatccc
tgctatgtggatgatctcttcatgctcactctgaatcgctgctttccgatcttcatggtg
ttggcctgggtctattctgtctctatgacagtgaagagcatcgtgctggagaaggagatg
aggttaaaagagactctgaaggccatgggcgtcactaaccgtgtgctctggtgcacatgg
ttcatcgacaccttcttcatgatggcctccagcacagccctgcttactcttattatcatg
ggaggaaaagtgctaaactacagcaatcccatcatcctcttcctattcctgctcactttc
accacagcaaccatcatgcaatgcttcctcatgagtgtgtttttcaacaaggctaacctg
gcagcagcttgcagcggaatcatttacttcaccctgtacctgccgcacatagtctgcttc
gcctggcaggaccgcatcaccaaagatatgaaaatcatggcgagtttgatgtcccaggtg
gcttttggctttgggacggagtacctgtcccgttacgaggagcagggtctcggtctgcag
tgggataacatccaaaccagccttttggaaggggatgagttctcctttctcatctcaatt
attatgatggtattggatacagtcctttatggcgttctcgcatggtacctcgataatgtc
ttcccaggccagtatggtattggtcgacctttttactttccaatccagccttcttattgg
ttaaaccgacccgagcctctaaaacaagttcctggaaagccagcagtggagaaacctgct
tttgataatctggtgaaccacactgatgaccaggccaagaaccacacggcacccgaaaaa
cctccagagccgccagggtcctgcaaacatggagacatacgggagaaactagagaaagag
aaagaaccaaagagggttgatgaagaggagacgaccaacaagagcatgagcacagactcc
tcagggaggctctttttcgagcctgagccatcaggtttggtggttggagtttgtgtggag
aacctatataagatgttcagcggcagctctagacctgctgtagatggtctgagtatcacc
ttctacgagggtcagatcactgctttccttggccacaacggtgcaggaaaaaccactacc
atgtctattctcactggcatgttccctcccacctctggcacagcgtttatttatgggaaa
gacatccgaactgatatggatgccattcgtaaatctctgggaatgtgcccccaacataac
atcatctttcaccatatgacggtagcagagcacatcttgttttactctctgctgaagggt
cggccattacctgaggcccagctagaggtggaaaatatgctggaagatcttggtctccct
cacaagaggaacgaggaggcacaaaacctgtcaggtggtatgcagaggaagctttccgtt
gccatggcttttgttggaggtgctaaagtggtgtttctggatgaacccacatcaggagtg
gatccgtattccagacgctccatctgggaccttctgctgaaataccgcgctggtcgtaca
gtgatcttgtccacacaccacatggatgaagctgacctgctgagtgaccgtgtggccatc
atctctcagggtcgtctgtactgctgtggctctcctctcttcctgaagagctgcctgggt
gctggtttctacctcactctggtgcggcgcattaaagagcagccgtcccatgtcagaaat
gaggctcagtgtgactgtactgaggactgctcctgtaagtgctcactctgtaccaaattt
aaagagagcactgaagagcagcccagagttacagaaagacagatggaaggggacgttgac
agcatcacggccctcattcaccatcacgttccggaggccagtcttatagaggtcataggg
caggagctgacctttctattgcccagccggggcttcaagcatcgttcttacgccagcctg
ttcagagagctggaagagacactggcagacatggggctgagcagttttggagtgtcagac
acttcactggaggagatatttctgaaagtcacagctgatggaggtgctgctcacatcaac
cctacgtctgatacagacaggttggtgtatgctaacggccaaacaaacgctggaagttca
accagcaaagatggcagaggatcccatcaggtgaagggaatctttctggtcttgaaacag
ttttttgctcttgtcataaagaggtttcatcacaccacacgttccagcaaagacttcctt
gcccagattgtgttgcctgctagttttgtcctcgtttctctgatgttcacgctgattgtt
cctccgttcggcgaataccccagccttactctaagcccatggatgtacggccgacagttc
accttcttcagtaatgaacagacacaaagcccagatatgagatattttggtgaggttctt
ctaaacagacctggatttgggactcgctgtatggtggatgaacctcttgtagactatcca
tgtaataacataaccacagagtgggagatgcccctggtgaacccagcgctcattgagatg
ctgggtaacccagaatggacggacatcagtccgtctcccagctgccagtgcagcacgccc
aacaaactcaccatgttacctgtgtgtccagaaggtgctggaggtcttcctcctccccag
aggattcagtccactggtgatgtgttgacggatttaaccggcaggaacatctcggattat
ttggtgaagacctacacaaacttaatacggacaagtttgaagagcaagtactgggtgaat
gaacagaggtatggtggcatttctgttggaggactacttcctgttcttgatgtggatcct
aaaaccatccagaatgcagctgctcagttaggacgtctgcttaacgtcacagggggcaga
tactcaaaacttactctgcaggagtttgggactttcttgagatatatggaaactgaaaac
aatgtcaaggtgtggttcaataacaaaggctggcacgctatggtggccttcatgaacgtg
gcgaataacgccatccttcgagcaaacctgcctcctggagctgatttaaatgagtacggc
atcacagccatcaatcatccactaaacctgaccaaggaacagctgtcggaggtcacagta
ctgaccacttcagtggatgccgtggtagctatctgtgtgatttttgccatgtccttcgta
ccggccagttttgtgctgtatctgatccaggagagagtgacgcaggccaaacacctgcag
tttgtgagtggggtcagtcctctggtgtactggattgctaacttcttctgggacatgata
aactatgctgtcagcgcagcgatggttgtggggatttttattgcatttgacaaaaaatgc
tacacctcgcctggcaacttgcaagccctgatagctctgctgatgctttatggttggtca
gtgactcccatgatgtatccgatgtcatatgtatttaacgtgcccagcacagcgtacgtc
tctctgtcctgcatcaacctcttcattggcatcaacagcagtgccatcacatttatatta
gacctgtttgacagtacagaggctctgtataagtgtaaccaggtgctgaagaaagctcta
cttgtctttcctcacttctgtttgggccgcgggctcattgacatggcgatgaaccgggcc
gtgatggacgtgtatgcacgctttggtgaggacttcagtttggatcccttcagctgggac
tttgtgggaaagaatgtgacgttcatggcgatagaggggtttgtctatttcatcctgaat
gttctgatacagtaccgattcttcctggatcactggatgtcagattttaaanagccgcca
ataactgatgaagatttggatgtggccaaagagagagagaaagtttacaaaggaggaagc
tctagtgacatcctccagataaaagacctatcaaagacgtatactggaacgattaggcca
gcagtggacaggatatgtgtaggagtgtcaccaggagagtgctttggacttctgggtgtg
aatggtgctgggaaaactaccacattcaaaatgctgacaggagacatagatgtcacttca
ggggaagcggttgtgactggttacagcattcttaccaacattctggatgtgcaccagaac
atgggctactgccctcaatttgatgccatagatgatcttctaacaggaagagaacatttg
cacttatacgctaggctcagaggagtcccggaatccgagatcagcagagtggctgaatgg
ggaattcagaaactgggtttatttgaatatgcaggctgcactgccggcacatacagtggc
ggaaacaagcggaaactctcaacagctattgcaatgattggctgtccagcacttctgctc
ctggatgagccaaccacaggaatggatcctcactctcggaggttcctctggaactccatc
atgagtgtgattcagggaggcagggcagtggtccttacatcacacagcatggaggaatgt
gaagctctctgcacacgactggccatcatggtgaatggaacattgaagtgtcttggcaca
acccagcacctcaaatacaaatttggtgatggatatgtggtcaccatgaaaatcacagca
gccaaagcaggcacagtaccagatctgaacccagccgaagcatttatggagagcacattt
ccaggctgcattcagagagagaaacactataatactctacagtacgagattgcttcttcc
tccctggccaaaatcttccagctagtcttggccaacaaggaaatgctgaatatcgaagat
tactcagtgtcccagacaacacttgaccaggtgtttgtgaatttcgcaaagcagcaatcc
ggagaagatgatgccattgtgctgcacccaagggcagctggtgcccggcgggacatgaga
gtctttccagtgaaaacgaaagcttga
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integrated database retrieval system
