Onychostoma macrolepis: 131533115
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Entry
131533115 CDS
T09350
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131533115 (trpa1b)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
131533115 (trpa1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
131533115
NCBI-ProteinID:
XP_058621173
LinkDB
All DBs
Position
24:complement(15721428..15786859)
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AA seq
1108 aa
AA seq
DB search
MQFGKEFVGQNSFYKCVINVEETDLDSADVFELAFKGKTSAIDHRSQKSPEQLSFRDENG
ASPLHYASAGGNVDIIRHIVSVVGPEELNVQDEQGRTPLHWAVEQDQQQSCVLLLELGAD
PNILNSAMMGPLHLAVTKRYNHLVEVLFQSCDKTDANLEGDLGNTPVMMACCANNCQAIQ
FLVKHGAKMCIQNKLGHYAIHTVAFAGAKEAMELVLEIGEELGHSTSVHINYLDKTKSSP
LHLAVRGGNIEVIKLCIIKGARVDQQQCDKSTALHFACTQGALEVVKVMLSSYNKVEDII
NIRDGANQTPLHRATLFDHVELAEYLISKGAEIDCTDCKGLSPLLIASKCCAWKTVAFLL
SIGADFRIKDEAGRNFLHFVVLQPRGMKNLPETVLQCNAVKEMLSDEDVEGCTPLHYACK
LGIHDSVKNMLGLNIFVGQKSREKKSALHFAAEYGRINTCKRLLETLTDSKMLNDWDEKG
LTPLHLASRAGHAQVVDLLLRSGALFQSDYKGWSCLHHAAAEGYTQTMKILLAANVKLLD
ETNEDGNTALHITAQVGHVGAVLMLLDRGAEISLNNANNSFLHEAVRNEKKDVVNAVIEN
ERCAEAITSFKATSRCAVMDIIEFLPESFRHLLDRCISESDHDANSSDYHIKYDFRWLQA
PIQLKKYAKTDKTMKYQPLAAMNAMVRYNRLELLTHPVSRKYLEMKWKAYGSKVHLLNLA
IYLLGLLPLTYLILNLRPKQEVFGNNTSVTMVPVSFKEQKYLISVCIIMVLVLNVYSVCK
ELVQLAQQQINYFTDFSNLADWCAAISSLVFVIPMCFNLENTWQWEAGAFAILTSWIGFL
LYFQRFERIGIYVVMFGGIVRTLVCIMILFIFLLLAFGLAFYALMLHQDEFSSISLALAQ
TFVMTVGELNYQSTFLNAYENSRMAFPGVTYFVFVLFVLLMPILLMNLMIGLAVGDIAEV
QRNAELKRIAMQIDLHTALEEKLPYWFLKRVDKPSITIYPNKCKKVLMQALVDGEIQNTV
RIRLNLCSRQGGPLERELHKQKNRLKAMSCLLEKQHNLLKLIIQKMEITSEADEYDGPHN
PRALKQPTSSSSQKSKWVPLLQAIRAKK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggaaaggagtttgtggggcaaaacagcttctacaaatgtgtgataaatgtt
gaggaaacagacttggattctgcagatgtgtttgagttggctttcaaagggaagacctct
gccatcgaccaccggagccagaaaagtccggaacagctaagcttcagggatgagaatgga
gctagtccgttacactatgcttcagctggaggaaacgtggacataattcgccacattgtt
tctgtcgtgggccctgaggagctgaatgtacaggacgagcagggcagaactcccctgcac
tgggctgtagagcaggatcaacagcagagctgcgtgttactgctggagctgggcgctgac
cccaacatcctcaacagcgccatgatgggccctctgcatctggctgtcacaaagagatac
aatcatctagtagaggtcctttttcagtcctgtgacaaaacagatgcaaatctggagggg
gatctgggaaacacccctgtgatgatggcctgctgcgctaataactgccaagctattcag
tttcttgtcaaacatggtgccaagatgtgtattcagaacaaattgggtcactacgctatc
catacagtcgcttttgcaggtgccaaagaggccatggagctggttttggaaattggagaa
gaactgggccattccacttcagtgcacattaattatttggataaaaccaaaagttccccc
ctccatctggctgtacgtgggggcaacattgaggtgatcaaactttgcatcattaaagga
gccagagtggatcagcaacagtgtgacaaatccacggccctccactttgcctgcactcag
ggtgctctggaagttgtcaaagtcatgctttcttcttacaacaaagtggaagacatcatc
aacatcagggatggagccaatcagacccccttacatagagccacgttgtttgatcatgtt
gagttggctgaatatcttatttcaaagggagcagaaattgactgcactgactgtaaggga
ctgtctcctctgctgattgcctccaaatgctgtgcttggaaaacagttgcatttttgctg
tcaattggtgccgatttcagaatcaaagacgaagcaggtcgcaacttccttcactttgtc
gttcttcaaccgagagggatgaaaaatcttcctgagacagtcttacagtgtaacgccgtg
aaggagatgttgtctgatgaggatgttgaaggctgcactcctctgcactacgcctgcaaa
cttggcatccacgattcggtcaaaaatatgctgggtctcaatatctttgtgggtcaaaag
tcacgggagaagaaatcagctcttcacttcgctgcagaatatgggcgaataaacacatgt
aaaaggctgctggagaccctcacagactctaaaatgctgaacgattgggatgaaaagggt
ttgacgcccctccatcttgcttcaagggcaggacacgctcaagttgtggacctgttgctc
agaagtggtgcgctttttcaaagtgattacaaaggctggtcctgtttacatcatgctgcg
gctgagggatacacacagacaatgaaaatcctcctggcagccaatgtcaaactactggac
gaaacaaatgaggatgggaacacggcccttcacataactgcacaagtgggacatgtaggt
gctgttttgatgttattggacagaggagctgaaatcagtctcaacaatgctaacaactct
tttttgcatgaagctgtgcgtaatgagaaaaaagatgtagtgaatgctgtcatcgaaaat
gagaggtgtgctgaggcaataacatcatttaaagcaacatcccgctgtgccgtgatggac
atcatagagtttctcccagagtctttcaggcaccttctggaccggtgtatttcagagtct
gatcatgatgccaatagttcagattatcatatcaagtatgattttcggtggcttcaggct
cctatacagctgaagaagtatgctaaaacagacaaaacaatgaagtaccagcctttggca
gctatgaacgccatggtgcggtataaccgtctagagctcctcactcaccccgtgagccga
aaatacctggagatgaagtggaaggcgtatggaagcaaggttcatttgctcaacctggct
atctacctgcttggcttgttgcccctcacatacctcattctcaatctgagaccgaagcag
gaagtttttggcaacaacacatctgtcaccatggtgcctgtatcttttaaagagcaaaaa
tatttaatctcagtctgtataatcatggtgcttgtcttgaatgtgtattccgtttgcaaa
gagctggtgcagttagctcagcagcaaataaattacttcacggacttctcgaaccttgct
gactggtgtgcagctattagctctttagtctttgtcattcccatgtgcttcaatctagag
aacacatggcaatgggaggccggagctttcgccattcttacttcatggattggcttcctg
ctctactttcagaggtttgagcgaattggaatttacgtggtgatgtttggtggaatcgtt
aggaccctggtgtgcatcatgattctctttatattcctattgctcgcatttggactggcc
ttctacgctttgatgctccaccaggatgagttcagctccatcagccttgctctagcccag
acgtttgtaatgacagtgggagagctgaactaccagagcacatttctgaacgcttatgaa
aatagccgcatggcgttccctggggtcacctattttgtttttgtgctctttgtgcttctc
atgcctattcttctcatgaacctaatgattggtttggcagtaggagatatcgcagaggta
cagagaaatgcagagttgaagaggatagccatgcagatagatcttcacactgcccttgag
gagaagctaccttactggttcctgaagcgagtggacaaaccatctatcaccatctatccc
aataaatgcaagaaagtgctgatgcaggcgctcgttgatggtgagatccaaaacacagtt
cgcatccgtctgaacctctgctcgcggcagggagggcctctggagagagagctgcacaaa
caaaagaacaggttgaaagcgatgtcctgtttgctggagaaacagcataacttgctcaag
ctgatcatccagaagatggaaatcacttctgaggctgatgaatacgacggcccacataac
cctagagctctgaaacagcccacttcctcctcatctcagaagtcaaagtgggtcccgctg
ctgcaagctattagggcaaagaagtga
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