Onychostoma macrolepis: 131533225
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Entry
131533225 CDS
T09350
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131533225 (trpc1)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
131533225 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
131533225
NCBI-ProteinID:
XP_058621405
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Position
24:complement(21576329..21597442)
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AA seq
800 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILSVLSVTLMWP
LLSICYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPPLEL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKN
AEEEPIVERKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEF
GKFLGLFLLVLISFTIGLTQLYGKDKDLSSSKNITKDCEGIFCQEQSNDTFHTFMGTCYA
LFWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIA
NHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKR
QNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRN
EMRDLLGFRTSKYAMFYPRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactcgctctccgttataatggctgctctatatcagggc
acggactcgtcttctcctgataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgaagaaacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgctgtcaccatttcaatcgaaaatgagaatctagacatattgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgatatcctgctaaaccatcgccccaggcgttcctccaagccttctatt
gcgaaattgatgcagcgcattcaaaacccagagtattccaccaccatggatgttgctcca
gtcattcttgctgcccaccggaacaattatgagattttgaccatgctattaaagcaagac
atctctctgccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgccaagaac
aagaaggacagtcttcgtcactcaaggttccgtctagatatctatcggtgcctcgctagc
ccatccttgatcatgcttacagaagaagaccccattctgagagcattcgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaagaacttgcc
aagcaatgcaagatgttcgccaaggacctactggctcaggcccgcaactctcgcgagctg
gaggtcatactgaaccacacgtccagtgaggaccacgtagacaagagaggcctactagag
gaacgcatgaacctcagtcgcctcaaactggccataaagtacaaccaaaaggagtttgtt
gcccagtcgaactgtcagcagttcctgaacacggtgtggtttggcgagatggcgagctac
cgccgcaagcacacatgcttgaagatcctgtctgttttgagcgtgacgctgatgtggcct
ctgctgtccatctgttaccttctgggaccccgttctcgagtgggccaggtcatccacaca
ccttttgtcaagttcatcatccatagtgcctcctacttcaccttcctgctccttctaaac
ctctactcactggtctacaacgaggataagaagaacaccatgggtccccctttggagttg
atagactaccttctaattctctggatcattggcatggtgtggtctgatgtgaagcgtctg
tggtatgagggattggaggacttcctggaagagtcacggaaccagttgagttttgtcatg
aactcgctttatttggccacttttgccctaaaagtggtggctcacagcaagtttaagaac
gctgaggaagagccaatagtagagaggaaaaactgggatgcattccatcccctcttggtt
gctgaaggcctttttgcgttcgccaatgttctgagctatctccgtctgttcttcatgtac
accaccagctccatcttggggcctttacagatctccatgggccagatgcttcaagagttt
gggaagtttcttggcttattcctgcttgtactcatctctttcaccattggcctgacacaa
ctgtatggaaaagacaaggacctatccagctccaaaaatataaccaaggactgtgagggc
atcttctgtcaagagcagagcaacgacacctttcacacgtttatggggacatgttacgcc
ctcttctggtacattttttccctggcacatgtggctctgtttgttacaaggattagctac
acagaagagctgcggtcgtttgttggtgctcttattgtcggtacctacaacatagttgtg
gtcatcgttctcaccaaactcctggtggccatgctgcataagagcttcagacaaattgct
aaccacgaagataaggagtggaagtttgcccgggccaagctgtggctcagctacttcgat
gacaagtgcacactgcctccacctttcaacatcctaccctctcccaagaccgtgtgttac
ttggtcatcagcttgagcaaatggatctgttcccacacctccacaggcaaggtcaagaga
cagaatagcctcaaggaatggaggaacctgaagcagaaaagagatgagaactatcagaag
attatgtgctgtctggttcaccgttacctgacctccacaaggcagaagatgcagagcacg
gaccaggccacggtagagaacctcaatgatcttcggcaagacctctccaagttccgcaat
gaaatgagagaccttttgggctttcgcacctccaaatatgccatgttttaccccagaagc
taa
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