Onychostoma macrolepis: 131533292
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Entry
131533292 CDS
T09350
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131533292 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omc01009
]
131533292 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131533292 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
omc03029
]
131533292 (rb1cc1)
Protein phosphatases and associated proteins [BR:
omc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131533292 (rb1cc1)
Membrane trafficking [BR:
omc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131533292 (rb1cc1)
Mitochondrial biogenesis [BR:
omc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131533292 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
131533292
NCBI-ProteinID:
XP_058621533
LinkDB
All DBs
Position
24:complement(5187286..5206772)
Genome browser
AA seq
1619 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAVQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRQSYRESLEKSSSPHPRTTGEDENEDEVGET
STQSAILGPADSQKNRKSPSPVSASGEASSQASSSPQDRLKSSCSLKAALEEEEESPERG
AAPYFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQNM
KAIKGLEDRLYALDQMIASCKRLVNEQQELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTEL
LERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRESFG
KLFRKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLNDLQYLKSCCPSEVQPYLR
VPTLCDFEPLNQHVEVLHQLVQAAQSVDEMSQTITDLLNEQKFSCSQSAQRSTALTPRSE
STTEITSTSTKTLSTLSLKAPNCQPLALPGPLEDLSPDSIDAQTFDFETIGHPNMDPVLQ
QGSLDLDSLAESPESDFMSAVNEFVIEENLMSPNPISDPTSPEMMVESLYSSVINAIDSK
RIQDTTTLEKENSKIAALKLSADRYRSAAEESQNNLRKVKEDLYHFRGLVLKEQQDFGFA
LKTMTVEVRNALNSVRYCHEQELRETQQTNLQSLKDDHEKQIQTLTKELEGNRKIVRDVQ
RAMLELEGLVERKEKEISQLESERERSMQELQDLHKQTVQDLEVKILKQSEELKATLLSK
DELAGQLDNLHFEIEHSQQKISQEMEKAEKVHLQELEARLKQQHEAELESLRLDKESALD
KLVQENLVKLRDLVDCHSAELKEREGRLKDLEARITELADARCKLEVEMALKEAEMEDMR
LQYEEAKSTQEEVLKAELTTQTTTLQAQIDMLNQQLQQKNEEYEVGLAELRALMRLEKDH
CISELVDRHEEESTLLRQEFSALKQKSQDAEKDCEERVQKIQHDHQDQFDALQRKKEDEQ
RAFQEKERELMTVIGDLQSENSLLSGRLEQERVEALQRTEEEKEEAVKAALQEALRDFQL
QKEETETRLLGQIELLENQLKDRQSTDLVGPTVEKTETGMETSAALSLDSGQWTEERASL
LAKLELLERSKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIISDLTEKLRNLAQQQE
KDKGLIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPVTEAHGACGPAYVEV
LLPSTPDPERLASVAPFKDEDRVESAVEASMMTVHDNPMLSEEKQRILILERTLHMKEEE
NKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHS
ESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaatggaagtacattgacatttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcagtc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagcgccggaacggataccaacccgatcttcctattcaacaaagagatgatcctg
tctgaccgagctccaaccatccccaaaacgaccttctccatagagaatgagatggagctg
aaggtggaggagtcactcatgatgcctgctgtctttcacaccgtcgcttcccgcactcaa
ctggctgtggaaatgtttgaagttgccaagaagctttgcttgttctgtgagcgtctggtc
catgatgaacaccttcagcaccagggatgggcggccatcatggccaacctggacgactgc
accctatcctatcaaaaactcctcatgaaattcgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcactgctgtctcagtcatggcg
aagattccactgctcgagtgtttgactcggcagagctacagagaaagcttggagaagtcc
agctcccctcacccgagaaccacaggtgaagatgagaatgaggatgaagtaggagaaaca
tccacccagtccgctatcctcggtcctgctgacagccagaagaatcggaagtcgccctcg
ccagtctctgcttcaggggaagcatcgtcccaggcatcctcctctcctcaggacagactg
aagagcagctgtagtctaaaagcagctctagaggaagaggaggagtctccggagagggga
gccgcaccctatttcaatgtcacgctcttggattggatcaacgttcaggacagacctaac
gatgtggagtcagtagtgaggaagtgttttgactcaatcaacaggctcgaccctcggatt
atccaaccctttctaactgaatgccgtgagacgattaccaaattggataatcagaacatg
aaggccataaaaggacttgaagacagattgtatgctcttgaccaaatgatagcaagctgt
aaacggttggtcaatgaacagcaggaacttgctcagggatttcttgccaatcagaagagg
gctgaaaacctgaaggacacctcggtgctgcctgacctgtgtctgagtcacgccaaccag
ctgatgatcatgctgaccaatcacaggaagctactagacatcaagcagaaatgtaccact
gccaaacaggagctagccaacaaccttcaagttcgtctcaaatggtgctgctacgtgatg
cttcacgctgatcaggatggagagaagctgcaggctctcctgaggctgctgacggagctg
ctggagcgcgtgcgggtggtggaggcgctcagcactgtgccacagatgtactgtcttgcc
gtagtggaggtggtcagacgcaaaatgttcataggacactacagacaatgggccaatgcc
cttgtcaaagatgggaaaaacctctatgaggcagaaaaagtaaaaagggaatcctttggg
aagctctttaggaaatcgtttctcagaaaccggttgtttcgaggactggactcatggcca
ccctcttcattttgcacccgaaagcctcgaaagtttgactttgagcttccagatatttcc
ctgaatgacctgcagtatctcaagtcctgttgtccttccgaggttcagccttacctcagg
gtccccacactgtgtgactttgagcctcttaaccagcatgttgaggttctccatcagctg
gttcaggctgcacagagtgtggatgagatgtcacaaacgatcactgacctactaaatgaa
caaaagttttcctgtagccagagtgctcaaagatccaccgcattaacacccagatctgaa
agcacaactgaaatcacctctacctccaccaaaactttgtccactctcagtttaaaagca
ccgaactgccaacccctggcgcttcctggtcccttggaggacctatcacctgacagcata
gatgcccagacttttgactttgaaaccattggacaccccaatatggatcctgtattacag
caaggctccttggacttagactcgttggcagaaagtcccgagtcggatttcatgtcagca
gttaatgagtttgttattgaggagaacttgatgtcacctaatcccataagtgatcccaca
agcccagagatgatggtggagtctctttactcctccgtcattaatgcaatcgatagcaag
cgtatacaggacactactacgcttgagaaggaaaattcaaaaattgcagcgctcaagctc
tcagcggacaggtaccgctctgctgcggaagagtcccagaacaatttgagaaaagttaaa
gaagacctttatcactttcgagggcttgttctgaaggagcaacaagactttggattcgcc
ctgaaaacaatgaccgttgaggtccgaaacgctctcaacagtgtcagatactgtcacgag
caggagctgagagaaacgcaacaaaccaatctccagagtttgaaggacgatcatgaaaag
cagatacaaactctcacgaaagagcttgaaggcaatcggaagattgttcgagacgtccag
agagcaatgctagaattggaggggctcgtggagcgcaaggagaaggaaatatcccagctg
gagagtgagagggaacgttctatgcaagaacttcaagatcttcacaagcaaactgtgcag
gaccttgaggtgaagatcttgaagcaaagtgaagaactgaaagctacattgctgtccaag
gacgaactcgctgggcagctggataacctgcactttgagatcgagcacagccaacagaaa
atcagtcaggagatggagaaggcagagaaagtgcaccttcaggaactggaggcacggttg
aaacaacaacatgaagcagagctggaatctctcagattggacaaagaaagtgcacttgac
aaacttgtccaggagaacctggtgaagctaagagatctggtggattgccattctgctgaa
ctcaaggaacgcgagggacgcttgaaagacttggaggctcgcattacagaacttgcggac
gcccgctgcaaactggaagtggagatggctcttaaagaggccgaaatggaggacatgaga
ctccagtacgaggaggctaaaagcacccaagaggaggtgttgaaagcggagcttactact
caaacaaccaccttgcaggcgcaaatcgacatgttgaaccagcagcttcagcagaagaac
gaagagtacgaggtgggcctggccgagctccgagcgctcatgaggttagagaaagaccac
tgcatctctgaactcgtggatcggcacgaagaggagagcaccctgctccgtcaagagttt
tcagcactcaagcagaagtcgcaggatgcggagaaagactgtgaggagcgagtccagaag
atccagcatgatcaccaggaccagtttgatgccttacagaggaaaaaggaggatgagcag
agagctttccaggagaaagagcgagagctaatgactgttatcggagacctgcagtcagaa
aactcactactgtccggaagactggaacaggagagggtggaggccctgcagaggacagag
gaggagaaagaggaggcagtcaaagctgcattacaagaggccttaagagactttcaactc
caaaaagaggagactgagacaagactgttaggacaaattgaactccttgaaaatcagctc
aaagacagacaatccactgacttagtgggacctactgtagaaaagacagagactggtatg
gaaaccagtgctgcattgtcactggacagtggccagtggaccgaggaaagggcatcgctc
ctggccaaactagagctcctggagcgctcaaagaacgaggagatgcagaacctgaagacc
tcgctcattgctgagcagcagacaaacttcaacactgttctaacccgggagaaactaaag
aaagagcaaatcatcagtgatctcactgagaagctcagaaatttggcacagcaacaagag
aaggataaaggcctgatcgaaacgctctctgaggaccgtgcctccatccttcaggagaag
aagcagatggaggaggaactcaaccgtctacgaagcaccgtcctcgtctcatcgtccttc
tttccgcccaatcccgtcacggaagctcacggtgcctgtggccccgcctatgtggaagtc
ctcttgccgtccacccctgatccagagagattggcgtctgtggctccgttcaaggatgag
gatagggtggagtcggccgtggaggccagcatgatgacagtgcatgacaaccctatgctg
tctgaagagaaacagcgcatactgattttggaaaggactttacatatgaaggaggaagag
aacaaaagacttagtcaaagattgatgtctcagagtatgtcgtccgtctcgtcacggcac
tcggagaaaatcgccattcgagactttcaggtgggcgacttggttctcataatcctggac
gagaggcacgataattacgttctcttcactgttggtcccaccctttatttcctgcactca
gagtccctcactgcactggacctcaaaccagcgacaggagcaacaagacggccgtgggtt
ctaggaaaagtcatggagaaggaatattgccaagccaaaaaggcccaaaaccggttcaaa
gttcctctcggcaccaagttctacagagtaaaggccgtgccgtggaacaagaaagtgtaa
DBGET
integrated database retrieval system
