Onychostoma macrolepis: 131533331
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Entry
131533331 CDS
T09350
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131533331 (ptbp2a)
Spliceosome [BR:
omc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131533331 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
131533331
NCBI-ProteinID:
XP_058621596
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All DBs
Position
24:6933701..6945765
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AA seq
514 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGSMYNSPSSGLSSISDTTSNGSDSKKLRVEDRVGDAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSVPVYIQYSNHKELKTDNSNQSGGTLTSGSNSSDGGGTPSSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPTSAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPSVVAALGKDSSSLLGKIPGTLSPLSA
AAAAAAAAGRVALSGHSGASGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDS
ALIQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLH
RFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKAFKFFQDHKMALIQ
MTTIEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgacgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcagcatgtataacagccccagttctgggctgagcagtataagcgatacgacatccaac
ggcagtgatagcaaaaaacttcgagttgaagacagagtcggcgatgccccaccatcccgt
gttcttcacattagaaagttacccaacgatgtctcggaaacagagatcattgccctgggg
cttccgttcggaaaggtcaccaatatcctcacactgaaaggcaaaaaccaggcgtttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactcggcagtgacgcct
cacgtccgtagtgtgccggtctacatacagtactccaatcacaaagagctcaagaccgac
aattcgaaccagtcaggtgggactctcacatcagggtccaactctagtgatggtggcggt
acgccctccagtccagtgctgaggataatcattgataacatgttttaccccgtcaccctg
gacgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagtacaacgatccaaccagtgcacagcaagct
aaagtggctctagatggtcagaacatatacaacgcctgttgtacccttcgcatagactac
tcaaaacttgtcaacctgaatgtaaaatacaataacgataagagcagggactacactagg
ccggagcttcctgctggagatgggcagcctgctctggacccctctgtggttgctgccctg
ggtaaagattcgagttccctgctcggtaagatcccaggtactctgagcccgttgagcgcg
gctgctgctgccgctgctgcagcaggaagagtcgctctatccgggcactcgggggccagc
ggagtgctgctcgttagcaatctaaatgaagagatggttacgccccacagtctgtttacc
ctcttcggggtttatggggatgtgcagcgtgtgaagattctttttaataagaaagacagc
gcactgatacagatggctgatatgaaccaggctcagcttgcgatgagccatctaaacggt
cagaagatgtattcaaagatcattcgcgttacgatgtcgaagcaccaaactgttcagtta
ccgagggacggtttagatgaccagggtctcacgaaagacttcacaaactcaccactgcat
cgtttcaaaaagcccggctccaagaacttccagaacattttccctccttctgccacgctg
catctgtcaaacatcccgcaagacataactgaagaagacctcagagtcctgttctccaac
tccggtggcactgtgaaagctttcaagtttttccaagatcataaaatggccctaattcag
atgacaaccatcgaggaagctattcaatgcctcatcgacctccacaattacaacatgggt
aataaccaccacctgaaggtctccttttccaaatcaaccatctaa
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