Onychostoma macrolepis: 131533379
Help
Entry
131533379 CDS
T09350
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131533379 (nlrc3)
Pattern recognition receptors [BR:
omc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131533379 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
LRR_4
NOD2_WH
SpoU_sub_bind
LRR_8
AAA_16
ssDNA_TraI_N
Motif
Other DBs
NCBI-GeneID:
131533379
NCBI-ProteinID:
XP_058621671
LinkDB
All DBs
Position
24:complement(4007715..4025266)
Genome browser
AA seq
1133 aa
AA seq
DB search
MDRHSHIPWQEYCYLDLKSNAQKQETSKRMEDPGWLHRHQTLLQRFFSTSILVNVVHHMR
KASLLSAQEAGLIQEMGSLKDKVHLLVEFLSVTDPHGAALQTYLQSSHLTEYNLITVHDS
VVQPYKDALIQRLKEDENSLAQVAGNSNSTLLLIECVSDLQQREHDLVQVSVNRGAGPLH
GRALGLDKLIAPLTRVSTAPRVTLTVGVAGSGKSRMVRRFIQLWSSGQIYPELSLAIPIA
CWELSSFDRLSVERLLRLFVPYDNMDVILFNESCKVLLILDGLEEFRQSLDFADAPSTSD
PRREIPVSDLIANIVRGNLLPGATLWLLSRPGTGAKVPAGLVDRVTETPPLSRTQIKDYI
NHCITNTLDAYSISSSQTDTPEDVSSQVWTYLNSQKPLLILSSVPAVCHIIVTTLSRLLK
LDSDATPLPRTLTEVYAHYCWPHLSGSDTPSGGIRKPLSTLGRLAFYSLLRRRYTFSETE
LRTYGVDVPPQGGTLSYRILQRRQSWLSNSMAWQFTHTSVQEFLGALFYYVSSRRGMFDL
FSESSVSWPRIGFHSHYRAALQKTNQSDAVAQGNLDLFMRFLSGLLSPAAAALLGGSLGV
GHEEQLTQRTTATTLLQNAVTGTGGDAVSMRSVTMVTCLAELQQAECLRSVEDDLINCNL
RGKLKGGVCAVLAYLLQVSDACTEETQLSNCLDSSSLKRLLPQLLYCSKLRMENNEFKEG
TMELLGSLLSAKECHIQMLSLADNSISSKGIKPLSRALLVNRTLTTLDLRGNNIGAKGAK
TLCEALKMNQVLVTVNLQNNHIEDEGARALAEVLQSNRKLTTLNIQKNGIGPEGVKKIGE
ALKKNQTLQDLNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQS
NRGLSCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMRVNRAI
TSLHLQWNFIKAGAATALAQSLMSNTCIQLLDLQENALGDNGVIALARALSSNPSLSVLY
LQGVSAGKSGAVALADALVANESLHTLDLRGNSIGMEGAKAFSSALKKNRSLRSLNLQEN
SLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKGGAPDCVVDI
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatagacattcccatatcccatggcaggagtactgctacctggatctgaagtccaat
gctcaaaaacaagagactagcaaaaggatggaagatcctgggtggttacacagacaccag
acgttgttgcaacggttcttctccacctccattttggtaaatgtggtccatcacatgaga
aaggcaagcctgcttagtgcacaggaggcggggcttatccaggaaatggggtcgttgaaa
gataaagtgcatttattggttgagttcctgtctgtcactgatccacatggtgccgccctt
cagacttatcttcaaagttcacacctgactgagtacaaccttataaccgtacatgactct
gtggttcaaccgtataaagacgctctcattcagcgactcaaagaagatgaaaattcattg
gcgcaagtcgccggcaactcaaattccactttactcctcatagagtgtgtatctgacctt
cagcagcgagaacacgacctcgtacaggtgtcagtcaacagaggggcggggcctcttcac
ggtcgagcgctgggattggacaagctgatcgctcctttgacgagagttagcaccgcccct
cgtgtgacactgacggtgggcgtggccggcagcgggaagagccgaatggtccgccgtttc
atccagctatggagctccggtcagatctatccagagctgagtctcgcaatccccattgca
tgctgggaattgagcagtttcgatcggctatcggtcgagcgtttgctgcgactgttcgtt
ccgtatgataacatggacgtaattttatttaacgaatcctgcaaagtgttgctcattttg
gacggattggaagaatttcgccagtcgctggatttcgcagatgccccgtccaccagcgac
cctcgtcgtgaaattcctgtgtcggatctcattgcgaatattgtacgaggtaacctgttg
ccaggggcaacgctctggcttttgtcaaggcctggaactggtgcgaaagttccagcagga
ttggtcgaccgtgtgacggaaaccccgcctctttcccgaacgcaaataaaggattatatt
aatcactgtattacgaacacgttagatgcgtattcgatatcatcgtctcaaacagacaca
cctgaggatgtctcctcccaagtgtggacttacctgaattcccagaaaccattgctcatt
ttgtcttccgtgcctgcggtttgccacattatcgtaactacgctatcacgccttctaaag
ttggactcagatgccacgccccttcctcgaacgttaacagaagtatacgcccactactgt
tggccacacctctctggatcagacacgcccagtggaggcatcaggaagccgcttagcact
ctgggacgccttgctttttatagcctcttacgacgacggtatacgttcagcgagacagaa
ttgcgaacttacggtgtcgacgtaccacctcagggtgggacgctcagctaccgcatcctt
cagcgcaggcaaagctggttgtccaatagcatggcgtggcagttcacgcacacgtccgtg
caggagttcctgggggcgctcttttactacgtttcgtcgaggcgtgggatgttcgatctg
ttttccgaaagcagtgtttcttggccccgcatcggcttccacagccactaccgcgctgcg
ctgcagaaaaccaaccaatcagacgccgtggcgcaaggcaacctcgacctctttatgcgc
ttcctgtcagggctgctgtctccagcggctgctgctttgctaggcggttcgctgggcgtt
gggcacgaggagcagttgacacagcgcacaacagcgacaactttgcttcaaaacgcagtg
accgggacaggaggcgacgccgttagcatgcgcagcgtcacgatggttacgtgtctggcg
gagctgcagcaggcggagtgcctgcgatccgtagaggatgatctaattaactgcaacctg
cgggggaaactaaagggcggagtttgtgctgttctcgcctacttgttgcaagtatcagac
gcatgtactgaagagacgcaactgtccaactgcctagactcctcctctttgaagaggctc
ctcccacagctgctgtactgcagtaagctgagaatggaaaacaatgaatttaaggaaggc
accatggagctgttgggaagtctgctgagtgccaaagagtgccatattcagatgcttagt
ctggctgataactccataagcagcaaaggcattaaaccgctcagtcgagctctactcgtc
aaccgaaccctcacaaccctggatcttcgtggcaataatattggtgccaaaggagcaaag
acattgtgcgaggccttaaaaatgaaccaggtccttgtgacagtcaatctgcagaataac
cacatagaggatgaaggagcgcgtgcgctggcggaggttcttcaatcaaaccgaaagctc
accacactcaacattcagaagaacggcatcgggccagaaggagtgaaaaaaatcggagaa
gcccttaaaaagaatcaaactctacaagatctcaatgtctccagcaatcatttgggtgat
ttgggaacagtagctctggctcaggcccttatggtcaaccatgtactccacacactcagt
cttcagagtaactcggtgagtgacagaggcattaaggctctctcacacgctcttcagtca
aatcgaggactcagctgtctcaatctaagggagaattcaataggagtcgctggagccaaa
gacatcgccaaagccttaaaagtcaacacttgtctcagagaacttgatttgaccgcgaat
cttcttcatgatgagggagtgacggccatcgctgaagccatgagggtcaacagagccatc
acctccttacatctccagtggaacttcataaaggctggagccgctacagctttagctcag
tctctcatgagcaacacctgtattcagctgctggatctgcaggagaacgctctgggtgat
aacggtgtcattgcactggcccgtgctttgagctcaaacccttctctcagtgtgctctat
cttcagggtgtatcagcggggaaatcaggggccgttgctctagcggatgctctggtggcc
aacgaaagccttcatacactagatctgcgtggaaactccattgggatggaaggagcgaag
gcgttttccagtgctctgaagaaaaacaggagcttgagaagtctgaatctacaggagaat
tctctggggatggatggagcgatcttcatcgctactgcgctgagaggaaaccatcagctc
acctacatcaatctccagggtaacggcatcggggagtcaggggcaaaggttgtctcagac
gccatcaaaggtggtgctccagattgtgtggtggatatctag
DBGET
integrated database retrieval system
