Onychostoma macrolepis: 131533565
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Entry
131533565 CDS
T09350
Symbol
trim55b
Name
(RefSeq) tripartite motif-containing protein 55b isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
omc
Onychostoma macrolepis
Pathway
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131533565 (trim55b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131533565 (trim55b)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131533565 (trim55b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
TRIM_CC
CoiA_N
Sina_RING
DUF5799
Caud_tail_N
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
131533565
NCBI-ProteinID:
XP_058621896
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All DBs
Position
24:complement(10061745..10070180)
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AA seq
368 aa
AA seq
DB search
MDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQSSNPYLPTRGGTVASGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQEYISSRPSPEQKVDQLMCEVHEDEKIN
IYCLTCGVPTCSMCKVFGAHKDCEVAPLNSIYQTQKTELSDRIAMMVGNNDRIQGIISQL
EETCRSIEENGRRQKSKVCEKFDHLYAIMEDRKREMNVKMNAEQEEKLNYIRRLTRKYGD
HLESMTKIMETGIQTLEEPEMAVFLQNTKLLLQKIAEASNTSHLERVERGYENMDHYSVS
FKREGRALRNIDFARDDDEEEEDEDEVGVDADGRAGQTASGEVDSLNEALPPLLPPQPLS
TCRTATSS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttggagaagcagcttatttgtcccatttgtctggaaatgttcacgaaaccg
gttgtgattcttccttgtcaacacaatctttgccggaaatgtgctaatgacattttccag
tcctcaaatccataccttcccaccagaggaggcacagtggcgtcaggtggccgtttcagg
tgtccatcctgcaggcatgaagttgtgctggaccgccatggggtctacggtctgcagaga
aaccttctggtggaaaacatcattgacatgtacaaacaggagtacatcagcagcagacct
tctcctgaacagaaggttgaccagctgatgtgtgaagtccatgaggatgagaaaatcaac
atttactgcctgacctgcggcgttcccacttgttctatgtgtaaagtgttcggtgctcat
aaggactgtgaagtggcccctcttaacagtatttaccagacacaaaagacagagctctcg
gatagaatagcaatgatggtgggcaataatgacagaatccaaggcatcatcagtcagttg
gaggagacctgcagaagcatagaggaaaatggcaggcgacaaaaatccaaggtgtgtgaa
aagtttgaccatttgtacgccatcatggaagacaggaagagagagatgaatgtgaaaatg
aacgctgaacaggaagaaaaactgaattacatacgtcgcctcacaaggaagtatggagat
catctggagtccatgaccaaaatcatggagacaggaatccagacactggaagaacctgag
atggctgttttcttacagaataccaaactcctcttgcagaaaattgcagaggcatcgaat
acctcgcacctggagagagtggagcgtggctatgagaacatggatcattactctgtgagc
ttcaaaagagagggcagggccctacgcaatatcgactttgccagagatgatgatgaagag
gaggaggacgaggatgaggtgggtgtcgatgcggatggccgggcagggcaaacagcctct
ggagaagtggactcgctgaatgaagcccttccgccccttcttcccccacaacccctgagc
acatgcagaaccgccacatcatcctaa
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