Onychostoma macrolepis: 131533907
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Entry
131533907 CDS
T09350
Symbol
neo1b
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
omc
Onychostoma macrolepis
Pathway
omc04350
TGF-beta signaling pathway
omc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131533907 (neo1b)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131533907 (neo1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131533907 (neo1b)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
131533907 (neo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
SusE
EphA2_TM
FAM176
DUF4834
Motif
Other DBs
NCBI-GeneID:
131533907
NCBI-ProteinID:
XP_058622371
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All DBs
Position
25:3554389..3690154
Genome browser
AA seq
1431 aa
AA seq
DB search
MAERGARLLVFFASLIVLRFGGADKGSGIRGFIPFRFSVEPIDTLAVRGLPAVLNCSATS
DAPVRVEWKKDGTFLNLVADDRKRQVADGSLLISTVVHSKNNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGFPRFLSQPEGVSVRMGGAEMLSCEVTEELVPFTRWERDGRAVELDSRV
IQLPSGALVISNASQSDAGLYRCTIDGLGPAKTTEEAELQVSADLGIEEKLETLQGPVAV
AKVVGESVLLPCVMKGSPVPVIRWTLNDRPIDESLERFAVIGGGTLQIVNLTEEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLIILDLDVALPSAVP
SLTDATTDHVAFSPAERNGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYS
LEGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNANGPGESSTPLTVATQLEVQV
PGPAPNLQVVSVSTTSVTLSWERPIIGNGEIQTYKLFYSEKGQDSEQDMDVMGLSDTMTG
LKKFTEYSFRVVAYNKYGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSIMVRWRSPP
PGTLNGELTGYKLRYRKGLRRADTIEISTTQLFQLIDGLEKGKVYTVRVSATTMNGTGPT
TEWIAAETFENDLDESQVPGMPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVITLKAFNNMGEGIPIYNSATTRHQSDPIDPDIDF
YELFNNPHTPAPDPTPMLPPVGVQATVLSHDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTTYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTSSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTTQDPAAEPSH
QRRGHEGEESVSTLAGRRGVRPKIMMPFDSQPSQPVISAHPIHPLDHLHHHHHHYHLPPR
GYLHHQISLRAPATPSTFSDRPPSAESVRNQPEPPVAPSQPSTTAELQKTEAVIEEEEPP
SINPPTAHVRPTHPLKSFAVPTVTVSAHNPPTYETALPSTPLLAQPVPGVKTASIGTLNR
VRAPMAVTVPSAPDQSETSKMLDMTYETDELSEEMAHLEGLMKDLNAITTG
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcacggctgcttgtgtttttcgcaagtcttatcgttctccggttc
ggcggtgcggataaaggttctggcattcgaggttttatcccgttcaggttctcggttgaa
cccatcgacacgctggctgtacgcggcctccccgctgtcctgaactgctcggccactagc
gacgctccggtgagggtggaatggaagaaggacgggacgttcctgaacctggtggcagac
gaccggaagcggcaggtagcggacggctctttgctcatcagtacagtggtccactccaaa
aacaataagcctgatgagggggtgtaccagtgcgtggccaccatcgacaatctgggcacc
atcagcagccgaaccgcacgactcacagtggcaggatttccgcggttcctcagtcagccg
gagggtgtgtcggtgcgcatgggcggcgctgagatgctgagctgcgaggtcacggaagag
ctcgtcccgttcacccgctgggagagggacggtcgggccgtggagctggacagcagggtc
atacagctgcccagcggagctctggtcatcagcaacgcctcccaaagcgacgccggtctc
taccgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcagaactacag
gtgtctgcagatttgggtattgaagaaaaactggagactctccaaggcccggttgctgtg
gcgaaggttgtcggggagagcgtgttgttgccatgcgtcatgaagggatcccctgtgcca
gtgattcgctggacgcttaacgaccggccgattgacgagagccttgagcgttttgctgtg
attggcgggggaaccctgcagatcgtcaacctgaccgaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgaccagcgagatccaggcagagcttacagtgcacgtt
cctccgcggttcttgacgagaccctccaacacttacgcccaggagtccatggacattatc
tttgagtgtgacgtcaccggctcgccgccgcccaccgtcaagtggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcagcataacctgcaggttttgggt
ttagtcaaatcagatgaaggtttttatcagtgtttagcggagaacgatgccgggaacgtc
caggcgagcgctcagctgatcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccatgtagcgttcagcccggccgagcgcaacggcccg
acgccctccgccccgcgggatgtcgtggcatctctggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccgcacggagagaacatcacctactctgtgttctacagt
ctggaaggcactaacagggagcgtgtggagaacaccagcggaccgggagagatgcaggtc
accatccagaacctcgtccccgacaccaagtacacctttcgggtggtcgcgtccaacgct
aacggcccgggcgagagctccaccccacttacagtggccacccagctggaggttcaggtc
ccgggtccggctccgaatctgcaggtggtctctgtgagcactacctcagtcacactgagc
tgggagagacccatcattggaaacggggagatccagacctacaaactcttctacagcgag
aagggacaagactcggagcaggacatggacgtcatgggtctgtccgacaccatgacgggc
ctcaagaagtttacagagtacagtttcagggttgtggcgtacaacaaatacggccccggc
gtctccactgaggatgttgtggtccgcacactgtctgacgtgccgagcgcaccgccgcag
aacctcactctggaggtcctgaactcaacgagcatcatggtccgatggcggtcgcctccc
cctggtaccctgaacggagagctgacggggtataaattacgctaccggaaaggactcagg
agagcagacacaatagagatctcaaccacacagctctttcagctcattgacggtctggag
aagggaaaggtttacactgtgagagtgtcagccaccaccatgaacggaaccggaccgaca
accgagtggatcgcagccgaaaccttcgagaacgacctggacgagtcccaggttccagga
atgccgagttctcttcatgttcgtccgctggtgaaccgaatcgtcgtgagctggactcct
ccagaaaaccaggacattttagtgcgaggttataaaatcggatacggaatcggcagccct
catgcccacacggtcactctggattacaagcagcgtttctacagcatcgataacctcgat
cccagttcccattacgtcatcaccctcaaggcattcaacaacatgggcgaaggcattccc
atctacaacagcgccacgactagacatcagtccgaccccatagaccctgatattgatttt
tatgaactctttaataacccacacaccccagcacccgaccccacacccatgctgcccccg
gtgggcgttcaggccaccgtcctcagccacgacaccgtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcaccgactccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatacaagatggcaaacaccacgtctctgtttcatacggta
acggctctgaagcccaacacgctttatgaattttccgttatggtgaccaagagccgcagg
agcagtacgtggagtatgacggcccacgggaccacctttgagtccattcccagctctgct
ccgaaagatgtgactgtgatcagtaaagagggaaatcctcgaatcatcaacatcaactgg
cagcctccaactgaagccaatggcaaaatcacagggtacatcatctactacagcaccgat
gtgaacgccgaggtccatgattgggtcgtggagcccgtggtgggaaacagactgacccat
cagattcagggtctgacgctggacaccacatactatttcaagatccaggccagaaactcc
aaaggcatgggacccatgtcagacgcggtgcagttccgcaccccgaaagctgaaccatca
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgactctaccggag
cacgggattggatcaaacatggataaaccaggcatcacgggcagccaggagaatcatatt
ctggtgatcgtggtgattgtctctgttggcgtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgtacgcgccgctccaactcccaccagaaaaagaaacgtgcggcctgtaag
tccagcaccagctcacacaagtacaagagctcatctaaagacctgaaaccacctgatctg
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacccgagcccaacccg
gtcatgacagaaacgcccatcccgcggaccacccaggacccggccgctgagcccagccat
cagagacggggtcatgagggggaggagagcgtgtccactttggccggtcggaggggagtg
aggccgaaaataatgatgccgtttgactctcagccttcccagcctgtgattagcgctcac
cccatccatcccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgt
ggctaccttcatcaccagatcagcctgagagcgcctgccacccccagcacgttctcagac
agacctccgtctgcagaatctgtaaggaatcaacctgaacctccggttgcccccagtcag
cccagcactacagctgaactgcagaagacagaggcggtgatcgaagaggaagagccgccg
agcataaaccctccgacagcccacgtccggcccacacacccgctcaagagcttcgctgtg
ccaaccgtcaccgtttccgcccataacccgcccacctatgagaccgcattacccagcacc
cctcttctagcacaaccagtgcccggcgtgaagaccgcgtctatcgggacactaaatcga
gtgcgagctccgatggcagtaacagtccccagtgcacctgaccaatcagaaaccagcaag
atgctggacatgacgtatgagacggatgaactctcagaggaaatggcccacctggagggt
ctgatgaaggacctgaatgccatcaccacaggctga
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