Onychostoma macrolepis: 131534002
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Entry
131534002 CDS
T09350
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131534002 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131534002 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
omc03036
]
131534002 (si:dkey-219c3.2)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131534002 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
131534002 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131534002 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
131534002
NCBI-ProteinID:
XP_058622549
LinkDB
All DBs
Position
25:13609571..13651720
Genome browser
AA seq
968 aa
AA seq
DB search
MMSLRFPQCLSSKTTHAPCAFLKRLSKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESELG
GQNKAAGPQGDTRRPSNALNPHLGKLLPAQVGTTLEQQRQPERNQEGNSKENGPDRIPAS
GAVPSTANLPSTSANSVTAANRVQYHSSNPSTCSSDAAPTDSHPKTNHIASAVRSVPARI
QTVNGSSGTLNSSVIASAPASVNGIDIGSGVGNGKSNMSAPPSTNTAFVSAQPNSTLPHA
NVSLDSPVNPTIALHRPPNTITSVVHNGGDPKVSGLPVQGSGLVPFTNTEPKSDPQNQIK
AIVPNQLPGTPVGLHPSTPAQIIVSSSPVVTSLPVASTPSALAKPATTALVGQPTTLLRP
GAPIQGTATATPLQRPGAPTTQLIVRPQQQTTIQLPPGFTIPPGMVLVRTEAGQLALVPQ
QVLAQAKAQSQNKGTLSPRPATPTAGTAFRVTTPVAQQKTAVVTITSAQKPTTTVITAGA
RVQPAPQTVLKPSVTPQSPVTTSAAAPANRAPVLSQEMQENVKKCKNFLATLIKLASHNS
PSPETSRNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALRLTLLNS
QQSLTQLSQTSATSTPLAVGTIKAPAPSTLPTTVSTIRPAAALASTTTMAVKRPGVQATP
TRMPVVITQTVRAQGAVGTPFQVRSPMGVAAQASANQKQKLNDPGGGTFRDDDDINDVAS
MAGVNLNEENARILATGSELVGTQIRSCKDEAFLPASLLHKRLLETAKKFGVTEVSMETV
TLISHATQSRLRSMLEKVSAVAQHRVDSCKDEELYEQASDVRTQLKFFEQLEKIEKQRKD
DEERELLMKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRK
LDSPGASAGAEFPAGSSGSATGSTSSSSSSVRQTRQRITRVNLRDLIFCLEQERTTARSM
LLYKALLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacgtttcccacaatgcctcagcagcaaaacaacgcacgcgccgtgcgca
tttctcaagcgtctctcaaagatggcgggtgtccccgatccactggaagatatgctctac
tccgaagtggacgaaaaagccgtcagtgacctcgtaggctcgttagaatcggagttgggt
ggacaaaacaaggcggccggtcctcaaggcgacaccaggagaccctcaaacgcgctaaat
ccacacttggggaaattactgcccgcccaagtaggaacaacactggagcagcagcggcag
ccagagcgaaaccaggagggaaactctaaagaaaacggcccggacaggataccggcgtcc
ggtgccgtcccgtccaccgcgaacctgcctagcacctctgcaaattcggttacagccgcg
aaccgggtgcaatatcattcatcaaatccatcaacttgttcaagtgacgcagcaccaaca
gactctcaccccaaaacaaatcacattgcgtctgctgtccggtcggttcccgccagaata
cagactgtgaacggaagcagtggcacgttaaactcttctgttatcgcttctgctcctgct
tctgtaaacggtattgacattggttcaggtgtaggtaatggtaaaagcaacatgtctgct
cctcctagtacaaatactgcttttgtgtcagctcagcccaacagcacactgccacatgcg
aatgtgtcactagatagtccagtaaaccccaccattgcactgcacaggcctcctaacacc
atcacaagtgtcgtacacaacggaggtgaccccaaagtctcaggattgcccgtgcagggc
tccggtcttgtgccgttcacaaacacagagcccaaatctgaccctcaaaaccagattaaa
gccatcgtcccgaaccagctccccgggactcccgtagggttgcaccccagcacgcccgct
cagattatagtgtcgtccagcccggtggtgacctcacttcctgtggcaagcacgccctct
gcccttgcaaagccagcaacgactgctctcgtaggacaacctacgaccctgttgagaccc
ggtgcgcccattcaggggacagcgactgcgacgcccctgcagcgtccaggggctcctacg
acccagctgatcgtcagaccacagcaacaaactaccattcagttaccgccaggattcacc
attcctccaggtatggtgctggtacgcacggaggccggtcagctggcattagttcctcag
caggtcctggcccaggccaaagctcagagccaaaacaaaggcaccctgtcaccgagacct
gctacacccaccgctggaaccgctttcagagtcaccacacctgttgcccagcagaagacg
gcagtggtaacgattacctcggctcagaagcccaccaccacagtcattacagcaggggcc
cgtgtgcagcctgcgccacagacagttctcaagccctctgtgacccctcagagtcccgtc
accacctctgctgctgccccagctaacagagcccctgtcctctctcaggaaatgcaagag
aatgtaaagaagtgcaagaacttcctagcaacgctcatcaaactggcatcccataattcc
ccctcgccggaaacatctcggaatgtgaaggcactagtgcaggatctgctggatgcaaaa
atcgagcctgaggagtttacaaatcgcctgcagacggagttgaaatcatctcctcaaccg
tacctgatcccttttttgaagaaaagcctgcctgctctgcgtctgactcttctgaactcc
cagcagtctttaactcagctatctcagacctctgctacatccaccccactggcagtgggc
accattaaagctcccgcgccgagcacactgcccaccaccgtatctaccatccgaccggct
gctgccctggcttccactaccaccatggctgttaagaggcctggggttcaggctactccg
acacggatgccggtggtgattacacagacggttcgtgctcaaggtgctgttgggacaccc
tttcaagtgaggagccccatgggtgtggctgctcaagcctcagccaatcagaaacagaag
ctgaatgaccctgggggtgggactttcagggatgatgacgacatcaatgacgtggcatcc
atggctggtgtgaacctaaatgaggagaacgcccgtatcttggccacgggttcggagcta
gtgggcacccagatccgttcctgtaaggacgaggccttccttcctgccagcctgctccac
aaacgtctcctggagactgccaagaagttcggcgtgacggaggtgtcaatggagacggtc
actctcatttctcatgccactcagtccaggctgcgctccatgctggagaaagtctcggct
gttgcgcaacaccgcgtcgactcctgcaaagatgaggagctctacgagcaggcgtcagat
gtgcggacccagctgaagttctttgagcagctggagaagattgagaagcagaggaaagat
gacgaagaacgggagctgctaatgaaagccgcaaaaagccgctcgaggcaggaggatccc
gaacaggctcggcttaaacagaaagctaaagagatgcagcagcaggaactcgcccagatg
agacagcgggatgccaacctcacagcccttgccgccatcggaccccgcaagaaacgcaag
cttgactctcctggggcctcggcaggtgcagagtttcctgcgggctcctccggatcagcg
accggttctacctcatcctcctcatcctcagtccggcagacccgtcagcgcattacccgg
gtcaacctcagggacttgatcttctgcttggagcaggagcgaaccacagccaggtccatg
ctgctctacaaggctcttctgaagtag
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