Onychostoma macrolepis: 131534066
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Entry
131534066 CDS
T09350
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131534066 (lingo1a)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
131534066 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
V-set
Motif
Other DBs
NCBI-GeneID:
131534066
NCBI-ProteinID:
XP_058622699
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All DBs
Position
25:6520895..6611232
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AA seq
615 aa
AA seq
DB search
MVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNAQERSVLCHRKKLMSVPE
GIPSETRLLDLSKNRIKTINPDEFSTFPQLEELELNENTISTIEPGAFNNLYGLQTLGLR
SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVMLRLRNLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQLIEGNRL
HDLLRLQEFHLVGGRLTMIEPYSFRGLNYLKVLNVSSNSLTTLEESVFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGTTVHFVCQADGDPTPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTLAFISNQPNDNGANGTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRKSDAGMS
SSGADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattcta
atcttaatgctgggcacagtgttgtctggctctgccacgggctgcccatcacgctgcgag
tgcaatgctcaggagcgttctgtcttgtgccaccgcaagaagctgatgtccgttccagag
ggaatcccatctgaaacacgactgctggacctcagcaagaatcgaatcaaaaccatcaac
ccagatgagttctccaccttcccgcagctggaagagctggagctcaatgaaaacaccatc
tcgaccatcgagccaggggcctttaacaacctctatggcctgcagactctgggactgcgc
agcaacaagctgaagctcatccagctaggagtgttcacgggcctcagtaacctaacaaag
ctggacatcagtgaaaataagattgtaattctgctggactacatgttccaggacctctac
aacttgcgctctctggaggttggggataatgaccttgtcttcatatcccacagggcgttt
cacggcctcagcagcctggagcagctcacgctcgaaaagtgcaacctgacctctgtcccg
acagaggccttcacgcacctgcacagcttggtcatgctacgcttgcgaaacctcaacatc
aacagcatcagagactacagcttcaagcggctctaccgtctcaaagtgctggagatcgcc
aactggccctacttggataccatgaccaccaactgcttgtacggattgaatcttacctcc
ctaacgatcactaacgcaaacttaacatcaattccgtatttggccttgcggcacctggtt
tatcttcgtttcctaaacatgtcctacaatcccatccagctgattgaaggcaaccggctc
catgacctgctcagactgcaagagttccacttggtgggcggtcgactgacgatgattgaa
ccctattcctttagaggactgaactacctgaaagtcctcaatgtgtccagcaactccctt
accaccctggaggagtctgtgttccattcggtggggaacctggagaccctcgcgttgtac
gacaacccactggcttgtgactgccgtctgctttgggttttccgacgccgctggaggctc
aacttcaaccgccagcagccaacttgctcctcacccgagttcgttcagggaaaagagttc
aaggacttccctgacgttctgcaacccaattacttcacgtgtcgcaagtctaggattcga
gaccggaaaccccagcagaagttcgttgacgaaggcaccaccgtccacttcgtctgccaa
gcagatggagacccgacacccgtcatcatgtggctttccccacaaaaacagttcatcacc
acgaaaacgataggacggctcactgttttcccagatggcaccttagaggtgcgctacgct
cagattcaggacaatgggacatatgtgtgcattgctagcaatgccggtggaaacgacacc
gctttggcccacttacacgtccacagttactcgccagactggcccaaccaacccaacaaa
accttggcgtttatctccaaccaacccaacgacaacggagccaatggaacaagagcaaca
gtcccgttcccgtttgatataaagacgctaatcatcgccactaccatgggcttcatctcc
tttttgggtgtggttctgttctgccttgttctgctctttctttggagcagaggcaaaggc
aacagcaaacacaacattgagatagagtatgtcccgcgcaaatcggacgctgggatgagc
agcagcggcgccgatgcccctcggaaatttaacatgaaaatgatataa
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