Onychostoma macrolepis: 131534255
Help
Entry
131534255 CDS
T09350
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omc03036
]
131534255 (tdrd12)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
131534255 (tdrd12)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131534255 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
131534255
NCBI-ProteinID:
XP_058623011
LinkDB
All DBs
Position
25:21043956..21074290
Genome browser
AA seq
1409 aa
AA seq
DB search
MGFAVGIEEMLEIQIIKIEDPGCLWARVLKGAGVQPDSPEEYENLRVKMNLFYHEVDLDV
QKLKPSELKEGLVCVVFSLALKSWCRAVVESVFQGTVDTQAWCLLVDHGDRIIVGAEEVR
TPLEKFLQLPFRVRRFKLAGIGPMTLQVPISENTAELVPSSTWDSSATKYLHNLLQVSTL
VEAVLCETQASCSAIELYLTVNNTKLCVNHELVAKKFACFMKEKSSALEGNRNGDRAPIS
LAWDIYSSPHQLLEMKGCCPIKPPPFSILTRKEQKDDPQTESEEVSHLKKQKPQVSEEAD
MLSQVNPRVSKLTRNAGTDTIGRGWRIRAEATDIFTDERCDQTNVHKPQYMKFNTLSHSK
QIPQTFEEQQHNPDQTDNNSIASTPAASSSSRVSDSSEEQKVAAPSQEPSLEDQLASSRL
MQFLNPDPLNPDQESLDAKVVRCDPGHSGVLVHAALRVEPCSNLTRAPISEQFRKFLLWR
KYNGPNVAESYCWPAVARGFDTVLVSHSGDNPLSYIPPLLMLLQTVSVVSSLAARTGPIA
VILCPGWEKVQTVLELLEDSKATYNLHPTSVLLGVDQEEPKKFKIQRNCQLLVTTPFTMM
RLLDAQCFLFLRLCHLVLDEADVLYSQAPEQMSVILKHFQKVVSGEERSSCPRQIIAVGS
RWSAGIEALVREHMIYPSIIITVMEEAALYGRVHQRVQLCLDCDKISVLLESLDFHPPKP
QKTLIITNSAKETEHVYKAVVNTAVFTLKAHEDVTDQFDFVIDQWRKDIGRGTQVILVTT
NDCLKALGIRDATCVVHYGFPSSPKLFGSRLFCLSENFRNLPDMDHAESSSPAAQSVLLL
SELNARHVCGVLRYLRRTGALLPPELLQFALGVQQAKEEQKTDRPLCSSLKSFGFCRSLL
HCSTSTRDSTVCPDRHTINKSLDHPKHPDSGTVMVLPLCIKSANVYSGRIVSQKDDVYES
LAAQMNAHYATERRCAVEVLKGELYAVQEENIYNRVRVIEVPEKGEQLFSSVTACFIDEG
RTQEVKSHQLLQLPPQFQDLLGQAVEIILCRVQPVDGEVDWNPKVTRAISQKIKGKLHQA
RVVMSVGNTVWVDPMVRMTRVPGLKTYINEYNVHAEILASGFGVNNPQHLDLLKRVFQGD
ENANTLQHLTNDRFESPSSSSQQRVEVIEDVLTSRMKDLVSSHNAMEFSQTPISPQNNSA
VQCNGDLKDSDDFDDSSEASMNIMSPDLNGFSSPKQTRPASSETDKDETLSANKLKKINK
PQNFHYPAPISFQPTSFHPQIKWFQRSETVTVYIKLISPVMQKCDFCSDTVIYSGYVNDR
HYYAKLELSGDIIAEECSWEMRCNEPVMKLKKKEKQDWRTLLKHKSQFVSYEFDFIDEPR
VSSLNGHLFLAEVGEEGCYVSSESASDSD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgcagtgggaattgaagaaatgttagaaatacaaataatcaagattgaagat
ccaggttgtctgtgggctcgagttctgaaaggagcaggcgttcagccggacagtccagag
gaatatgagaacctgagagtgaaaatgaacctcttctaccacgaggtagacctggacgtt
cagaaactaaagccttctgagctgaaggaggggctggtgtgtgtggtgttcagtctggct
ctgaagagttggtgtcgagctgtagttgagtctgtctttcaggggacggtggacacgcag
gcctggtgcttgttagtagatcacggagatcgaatcatcgtcggagcagaggaggtgcga
actcctcttgagaagttcctgcagcttcctttcagagtgaggcgctttaaactggcagga
attggtccgatgacacttcaggtgcccatctcagaaaacacagcagagcttgttccatct
tcaacatgggatagctctgccacaaaatacctgcacaatctattacaagtgtcgactctg
gttgaagccgttctgtgtgaaacgcaagcaagctgctctgctattgagctctacttgact
gtcaataacacaaagctctgtgtgaaccatgagctcgtggcgaagaagtttgcctgtttc
atgaaagagaagtccagtgcgctggaagggaacaggaatggagatcgtgctcctatcagc
ctggcgtgggacatctactccagccctcaccagctcttagaaatgaaaggatgctgtcct
atcaaacctccaccattctccattctcaccagaaaagagcagaaagatgatcctcagaca
gaatcagaagaagtttctcatctaaagaagcagaaaccacaggtgtcagaggaagcagac
atgctatctcaggttaaccctcgagtctctaaactgacccgcaatgctggaacagatact
attggcagaggatggcgtatcagagccgaggccaccgacatcttcacagatgaacgctgt
gatcagactaacgtacacaagcctcaatatatgaagtttaacacactttcacattcaaag
cagattcctcaaacttttgaagagcagcagcacaatcctgatcaaacagacaataacagc
atcgcttcaacaccagctgcaagttcatcatcacgtgtgagcgactcctcagaagagcag
aaagtggcagctccctcacaagagcctagtcttgaagatcaactggcctcttctagactt
atgcagttcctgaaccctgatccactcaatccagaccaagagtctcttgatgccaaagtt
gttcgttgtgacccgggtcactcaggagttttagtgcatgccgcccttcgtgttgaaccc
tgcagtaacctgacacgtgcacccatcagtgagcaattcagaaagttcctgttgtggagg
aagtataatggaccgaatgtagcagagagttactgctggcctgctgtggcacgcggtttt
gatacagtactggtgtcacacagcggtgacaatcctctgtcctacattcctcctctgctg
atgctgttacagacggtttctgtcgtctccagtctcgctgctcgcaccgggcccatagca
gtgatcctgtgtccgggctgggagaaagttcagacggtgctggagctcctggaggacagt
aaagcaacttacaacctccatcccaccagtgtgctgctgggtgtggaccaggaagagcct
aaaaagttcaagatccagaggaactgtcagttgctggtgacaacaccattcacaatgatg
aggctgctggatgctcagtgcttcctcttcctgagactgtgtcatctggtgctggatgag
gctgatgtgctttattcacaagcacctgagcagatgtcagttatcctgaagcacttccaa
aaggtggtctctggggaggagaggtcctcgtgccccaggcagatcatcgcggtgggcagc
cgctggagcgctgggatagaggctctggtcagagaacacatgatttacccctccatcatc
ataaccgtgatggaggaggcagctctgtacggcagggtacatcagagggttcagctgtgt
ctggactgcgataagatctccgttctgctggaatcgctggacttccacccgcctaaaccc
cagaaaaccctcatcattaccaactctgctaaggagaccgagcatgtgtataaggctgtg
gtcaacactgccgtgttcacactgaaagctcatgaagatgtgacggatcagtttgacttt
gtcattgatcagtggagaaaagacatcggccgtggaacgcaggtcattctggttaccacc
aatgactgccttaaggcactcgggatccgggacgccacgtgcgtggtgcattatgggttc
cccagctcccccaagctcttcggcagccgcctgttctgcctgtcagagaatttcagaaac
cttccagacatggatcatgccgagagctcctctcctgcagctcagtccgtgctgctgctg
tcggagctgaacgcccgtcacgtgtgtggcgtcctgcggtacctgaggagaaccggcgct
cttctgccccctgagctgctacagttcgctctgggcgtccagcaggccaaagaggagcag
aagacagacagacccctctgctcctcgctcaagagcttcggcttctgcaggtctctgctt
cattgtagtacttccaccagagacagcacagtttgtccagatagacacacgatcaacaaa
tccctggatcatccaaagcacccagactctgggactgtcatggttttgccgctgtgcata
aagtcagcaaatgtgtactctggccgcatcgtgagccagaaagacgatgtttatgagagt
cttgctgctcaaatgaacgcacactatgctactgagagacgctgtgctgtggaagtgctg
aagggagaactttacgctgttcaagaggagaatatctataaccgggtgcgtgtgattgaa
gtgccagaaaaaggagagcaactgttcagcagcgtcactgcctgcttcatagatgagggt
cgcacacaggaagtgaaatcacaccagctactccaacttcctcctcagtttcaggatttg
ctaggccaggctgtggagatcatcctgtgcagagtgcagcctgtcgatggggaggtggac
tggaacccgaaggtgaccagagccatcagtcagaagatcaaagggaagctgcatcaggcc
agggttgtgatgagtgtgggaaatactgtctgggttgatcctatggtgcgcatgacacgt
gttcctggtctgaagacctacattaatgagtataatgtccatgctgagatcttggcctcc
gggtttggtgtcaataatcctcagcacttggatctgctgaagagagttttccagggagac
gagaacgcaaacacgctccagcacttgacaaatgacaggtttgagagcccttcgtcatcc
tcacagcagagagttgaggttatagaagacgttctgactagtaggatgaaggatttagtc
agcagtcataatgccatggagttcagccagactcccattagtccccagaacaacagtgct
gtccagtgcaatggagacctgaaggacagtgatgattttgatgattcttcagaggcaagc
atgaatatcatgagccctgatctgaatggattctcatctccgaagcagaccagacctgcc
agctctgaaacagacaaagatgaaaccctgagcgccaacaaattaaagaagatcaataaa
ccacagaatttccactatccagcccctatctcattccagcctacaagttttcacccacag
atcaaatggttccagaggagcgagacggtcacggtctacataaagctcatcagtccggtg
atgcagaagtgtgatttctgctcagacactgtcatttacagtgggtacgtgaatgaccgg
cattactatgcaaagcttgagctgtccggggacatcatcgcggaggagtgctcatgggaa
atgagatgcaatgagccggtgatgaagctgaagaaaaaggaaaagcaggactggagaaca
ctcctcaaacacaagagtcaatttgtcagctatgaattcgacttcattgatgagcctcgt
gtttcttcattaaatgggcacttgttcctggctgaggtgggagaggagggctgttacgtc
agctctgagagcgccagcgacagtgactga
DBGET
integrated database retrieval system
