Onychostoma macrolepis: 131534517
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Entry
131534517 CDS
T09350
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
omc
Onychostoma macrolepis
Pathway
omc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131534517 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131534517 (lrrc4ca)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
NGL family
131534517 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
131534517
NCBI-ProteinID:
XP_058623413
LinkDB
All DBs
Position
25:complement(8150475..8398417)
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AA seq
647 aa
AA seq
DB search
MINKMSSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPVSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDDGHPTVQQKGGPT
PSSGIWETLPPSFTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMEGHLALPPL
EHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgtcctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgttcgtgctgtcgctggccctgcagcttctggtggtggct
ggcctggtgcgagcgcagacctgcccctccgtctgctcttgtagcaaccaattcagcaag
gtcatctgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgatcaaagttgacagcttcaagcatcta
aggcacctcgagatcctgcagctcagcaagaaccacatccgcaacattgaaatcggagct
ttcaatgggctggctaacctcaacactctggagctcttcgataatcgtctaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaagagctttggttgaggaataaccct
atcgagagtataccctcttatgccttcaaccgcgtaccatcgctgcgaaggctggacttg
ggtgagcttaaaaggctctcgtatatttcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttaaaggagatccccaatctcattcctcttgtc
cgtttggatgagttggagatgtcaggaaaccagctgtctataataaggccagggtctttc
aaaggcctcgtccacttacagaaactgtggatgatgcatgcgcagatccagacgattgag
agaaatgccttcgatgatcttcagtccctcgtggagctcaatttggcccacaataacctt
accctcctgcctcatgacctcttcaccccactacaccacttggagagggtacacttgcac
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtgccggccaataccagttgctgtgcccgctgctcgtcacctgtcagccataaagggcgc
tacattggcgaactcgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcggacctgaatgtgactgagggcatggcagcagaactgaaatgtcgagcgaattct
ttgacctcagtcagctggatcacgcccaatggctccatcatgacgcacggagcatacaag
gtgcgcatttccgtgctcaacgatgggacgttaaactttaccaatgtcacaatgcaggac
acgggaacgtacacttgtatggtgagcaactccgcagggaacacgacagcctcggctacg
ctcaacgtgtcctcgacagagaacagcagcttcagttacttcactacagttaccgtcgag
accacagaagcagcacatgatgatggccacccaacggtacagcagaaaggcggccctact
ccttcttctgggatttgggagaccttaccaccgtccttcaccaccactaccacgacagca
cggacaccactgtccaccaaggccaccgacaagacctacaccatcccagtcacagccctg
attgatggctcactcaacaccttggatgaggtcatgaagaccacaaagatcatcattggt
tgctttgtagccatcaccctgatggcggcagtcatgctgatcatattttataaaatgcgc
aaacagcatcaccagcagaaccaccacgcaccgacgcgaaccatcgagatcatcaacgtg
gatgaggattgtgtaactggtggacctaccatggagggccacctcgccctccccccactg
gagcatgagcacctgaatcattacaacgcctacaagactgcgtacaaccatgcctccacc
atcaattctatacacagctctgcccacgaacctttgctaattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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