Onychostoma macrolepis: 131534953
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Entry
131534953 CDS
T09350
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131534953 (rfwd3)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131534953 (rfwd3)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131534953 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
WD40_CDC20-Fz
Beta-prop_THOC3
zf-RING_UBOX
zf-rbx1
WDR55
Beta-prop_EML_2
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-C3HC4_3
CFAP43_N
EIF3I
WD40_Prp19
Beta-prop_RIG_2nd
zf-RING_11
zf-RING_Vps41
WD40_WDHD1_1st
WD40_2
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
zf-C3HC4_4
zf-UDP
zf-ANAPC11
Beta-prop_ACSF4
Beta-prop_SPT8
YabA
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
131534953
NCBI-ProteinID:
XP_058624077
LinkDB
All DBs
Position
25:20863406..20875836
Genome browser
AA seq
661 aa
AA seq
DB search
MEDVEMEVAPVSSEANVIVVSESGSSTEEEGVAMQVQGPSERPRLSARRVVRRRHIAGSH
SQFSTHEERMRRLRELIVENLAERLSGSQDAQRSVPHVNPPPLDPEPSSNRTAAVANVST
SDESSATGSSVSTEAEGTRAAAQPDESQQKTEPVSESEDPVTAAASPAGETAVDEGEGET
CSICFEPWTTAGDHRLAALRCGHLFGYICISRWLTSGGNKCPQCNKPAKRGHIIFLYARK
LKALDNAEEVRLKSRLELEQGSRRMEQLEVAQCRQKMQLMVDENVRLRKEVEELRRWKAQ
AAFGSSQGASLSSSQRQDSSSGGHYVFSKAVLVSQTGGSRVLSYCEPLGCLLASQPSPQA
TLVPGFGVKKISTATLKPSQYVPIHSKQIRGLAFSRHQDSLLLSAALDNTIKLTSLMTNT
VVQAYNTGRPVWSCCWCHDNNNYIYAGLANGSVLVYDTRDTSTHIQELAPLRSSCPVVSL
SYIPRAASSMFPCGGLIAGTLEGGCFWEHIEGNTYTPHILPLESGNCTDIQVEPDSRHCL
VTYRPGRANPSLRCVLMELSRTPQTDSRQPPVCSCSPVQTFIAGSSCKLLTKNTVFKSPA
GEGATLVCAGDEATTPPWSGMPALVLCFRRCLRISRVGHLSAWGQPEQLSGLSDREDAEG
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtggagatggaagtagctccagtatccagtgaggccaatgtgatcgtagtc
tctgaatctggaagcagcacagaggaagaaggtgttgccatgcaggttcaaggcccatct
gagagacccagactttcagcccgtcgggtggtcaggaggagacatatagctggatcacac
tcgcagttctccacgcatgaagagaggatgcgcagactccgggagctcatcgtagagaat
ctggcagagcggctgagtggctcccaggatgcacagcgttcagttcctcacgtaaatcca
ccaccgctggatcctgaacccagctccaaccgcactgccgctgttgcgaatgtgtcgacg
tctgatgaatccagcgctacagggtccagtgtttctacagaggctgaagggacgagagca
gctgctcaaccggacgagtctcaacaaaagactgagcctgtctctgagtcggaggatccc
gtcacggcggctgcgagtcccgctggagagaccgcagtggatgaaggtgagggagagacc
tgctccatctgttttgagccctggaccacggcaggtgaccaccgcttggccgctcttcgc
tgtggtcacctcttcggctatatttgtatttcccgctggttgacgagcggaggaaataaa
tgtccacagtgcaataaaccagccaaacgtggtcatatcatctttctttatgcacggaaa
ctgaaagctctggacaacgcagaggaagtgcgactgaagagtcgtttagagctggagcag
gggtcgcggaggatggagcagctggaagtcgctcagtgtcgtcagaagatgcagctcatg
gtcgatgaaaacgtgcgactgcgcaaagaggtcgaggagctgaggaggtggaaagctcag
gcggcgttcggctcctctcagggagcgtctctctcgtcgtcccagaggcaggactcgtcc
agcgggggacattacgtcttctctaaggctgtgctggtgtctcagacggggggcagtagg
gttctgtcctactgcgagcctctcggctgcctgctggcgtctcagccttctccacaagca
accttggtgccaggcttcggtgtgaagaagatcagcactgcgactctcaaacctagtcag
tatgttcccatccactccaaacagatcagaggtctggccttcagccgacaccaggacagc
cttctgctctctgcggccctcgacaacactatcaaactcaccagtctgatgacgaacacg
gtggtccaggcctataacacgggcagacctgtgtggagctgctgctggtgccatgataac
aacaactacatttacgccggtctcgccaacggctctgtgctggtgtacgacacgcgggac
accagcactcacattcaggagctggcgccgctgcgctccagctgtccagtggtgtctctg
tcctacatcccgcgcgccgcctccagcatgttcccgtgtggcggcctgatcgcaggcacg
ctggagggcggatgtttttgggagcacattgagggaaacacatacacgccacacatcctg
ccgctggagtccggcaactgcacagatatacaggtggagccggacagcagacactgtctc
gtcacgtacagaccaggtcgcgcaaacccgtccctgcgctgtgttttaatggagctcagc
cggacgcctcagacagacagcagacagccgcccgtctgctcctgctctccagtccagacc
ttcatcgctggatcctcctgcaagctgctcaccaagaacaccgtgttcaagagtccggcc
ggagagggagccacgctggtgtgtgctggagacgaggccacaactccaccatggtctggg
atgccagcactggtgctctgcttcagaagatgcctgcggatctcccgtgttggacatctg
tccgcttggggtcaaccagagcagttatctggcctctctgaccgagaagatgctgaaggt
ctataa
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