Onychostoma macrolepis: 131536397
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Entry
131536397 CDS
T09350
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03030
DNA replication
omc03410
Base excision repair
omc03420
Nucleotide excision repair
omc03430
Mismatch repair
omc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131536397 (pold1)
03410 Base excision repair
131536397 (pold1)
03420 Nucleotide excision repair
131536397 (pold1)
03430 Mismatch repair
131536397 (pold1)
03440 Homologous recombination
131536397 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omc03032
]
131536397 (pold1)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131536397 (pold1)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131536397 (pold1)
DNA replication proteins [BR:
omc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
131536397 (pold1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
131536397 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
131536397 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
131536397
NCBI-ProteinID:
XP_058625262
LinkDB
All DBs
Position
03:40253946..40269739
Genome browser
AA seq
1105 aa
AA seq
DB search
MEFKRRNGGPAIGGASQAKKGKINTEWEDSPSQFEEELALFDEMEMEVESEEGKAGHDVI
PVGDLFSADLNPRWKRPHAPPLHPNSDTLIFQQIDLDYYLGSAVAGMPGQVQGKVPIVRM
FGVTDNGNSVCCHVHGFAPYFYVSAPNGFTNAHLADFKRELNSAVLKDMRSNKDNIAITV
LAVDITKKESMYHYHGNKPLDFLRITMAMPRLIAPAKRLLEQGFKFANFATQSYQAYEAN
IDFEIRFMVDSDVVGCCWIELPKGNYRLREERSEGRTDSKYPGKVSLCQYEVDVAWNHLV
SHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEIDPVIQIASMVLRQGEKEPFIRTVFT
LQSCASIVGSQILCFTQEKLLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAATLKVS
LFPYLGRVWGVKSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSV
PITTLDFSSLYPSIMMAHNLCYTTLLQKSQVDKLGLAPEDFIKTPTGDLFVKSSVRKGLL
PEILENLLSARKKAKTELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGCQADAKVIYGDTDSVMVKLGVATVQEAMNLGK
EAADWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSNAEHHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVVHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKNDVAVCDFCKKKESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaaaggcgcaatggaggccctgcgattggcggggcttcacaggccaagaag
gggaaaattaacacagaatgggaggatagcccctcccagtttgaagaggaactcgctcta
tttgatgaaatggaaatggaggtggagtcagaggaggggaaagcaggtcatgatgtcatt
ccagtgggtgacttattctctgctgatcttaatccacgttggaaacgacctcatgcacct
cctctacatccaaactcagacacactaattttccagcagatagacctggattactacttg
ggatctgcggtggcaggaatgcctgggcaggtgcagggcaaagtgcccatagtgcgcatg
tttggtgtgacggacaatggaaatagcgtgtgctgccatgttcatggattcgccccgtat
ttctatgtttctgcccccaacggttttacaaatgcacacttggctgactttaagagagag
ctgaactctgctgtattgaaggatatgcggtccaataaagacaatatagccatcactgtg
ctggcagtggacatcaccaagaaggaaagtatgtatcactaccatggaaacaaacctctt
gacttcctgcgcatcaccatggcaatgccgcgtctgattgccccggcgaagcgtcttctt
gagcagggttttaaatttgccaacttcgccacccagagctaccaggcctatgaagccaac
attgactttgagatcaggttcatggtggacagtgatgtggtcggttgctgctggattgag
cttcctaaaggaaattacaggctgagggaggagaggagtgaaggacggacagactcaaaa
tatccaggaaaggtgtccctgtgtcagtatgaggtggatgtggcgtggaatcacttggtc
agtcatccagctgaaggagagtggcagagaatcgctcctctcagagtcctgagctttgat
attgagtgtgctggaagaaaaggtgtgtttcctgagccagagatcgaccctgtgattcag
atcgcctctatggtgctgcgtcagggagagaaggagccatttatccggacggtcttcacc
ttacagagctgtgccagtatagtgggctcccagattctctgctttactcaagagaaactg
ctactgcagagttgggctgagtttgtgaggacagtggatcctgacatcatcactggctac
aatatccagaactttgatcttccgtacctcctcaacagagctgcaaccttaaaggtgagt
ttgttcccgtatctgggccgtgtgtggggcgttaaatcggtcctgaaagactctagcttc
caaagcaagcagatgggccgcagagagaacaaaacggtcaatatggagggacgtgtgcag
tttgacctactacaggtgttgctgagggattataaactgcgctcttacacactaaacgcc
gtcagtttccattttctgcaggagcagaaggaggatgtgcagcattctatcatcacagac
ctacagaatgggaatgagcagacccgcaggcgtttggctgtgtactgtctgaaggatgca
tatctgcccctgcgcttgctgcagaagttaatgtgtgtcattaattacatggaaatggcc
agagttactggggtgcccctgacatacctgctctctcgtggacagcagattaaagtggtt
tcacagctcctgagacaggctatgaagcaggatctggtaatgccagtggtgaggacagag
ggtggggaggactacactggagccactgtcatagaaccagagaaagggtattacagtgtt
cctataacgactctggatttctcctcactgtatccctccatcatgatggctcataattta
tgttacactacactcctgcagaaaagccaggtggacaaactcggcctggctccagaagat
ttcatcaagaccccgacaggtgatctgtttgtgaagagctctgtgaggaagggccttctc
cctgagatcctggaaaacctgctgagtgccaggaaaaaggcgaagacagagctgaagaaa
gagacagacccctttaaaaagcaggtgctggacggaaggcagttggctttgaagatcagt
gcaaactccgtgtacgggttcaccggggctcaggtgggcaaactgccctgtctggagatc
tctcagagcgtcactggctttggtaggcagatgattgaacagaccaaacagcttgtggaa
tcaaaatataccatctctaatggttgccaggcagatgcaaaggtcatctatggagacacc
gactctgtgatggtgaaactaggtgtggccacagtgcaggaagcaatgaatctgggaaag
gaggctgctgattgggtttcctcccacttcgttccaccaatcaaattagagtttgagaag
gtgtattacccatatctgctgatcaataagaagcggtacgccgggttgtatttctcttct
aatgctgaacatcatgataagatggattgcaaaggaattgagaccgtcagacgagacaac
tgccctctagtggccaaccttatcaacacatgcctccagaacatcctcattgacagagac
cctgatggagcagtagttcatgctaaagaagtcatctctgaccttctgtgcaaccgcatt
gacatcagtcagctggtcataactaaagagctcacacgcaccgcacaggagtatgccggc
aaacaggcccacgtcgagctagcagagaggatgcggaagcgtgatgccggtagtgctcca
aacctcggagatcgagtcccgtacgtcatcatcaaagcagcaaagggagtggcagcatat
atgaaatcagaggaccccatctatgtgctggagaacaacatccctatagacacacaatac
tacctggagcagcagctgtccaaacctttactgcgcatctttgaacccatactgggcgag
agcaaagctgagagtgtgttgctgaagggcgatcacacacgttgtaagacggtcttgaca
tctcgagttggtggtctcatggcttttgctcagaaacgaagcacttgcattggctgccga
gctgtgctcaaaaatgatgtggctgtatgtgacttctgcaaaaagaaagagtcagagctt
tatcagaaagagatcgctcatctgtcgactctggaggagaaattctctcgtctgtggact
cagtgtcagcgctgtcaaggttcactgcatgaagatgtgctgtgtaccagtcgagactgt
cccattttttacatgaggaagaaagtgcagaaagatttagacgatcaggagaagctcgtc
tcccgttttggttggtga
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