Onychostoma macrolepis: 131536424
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Entry
131536424 CDS
T09350
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
omc
Onychostoma macrolepis
Pathway
omc00260
Glycine, serine and threonine metabolism
omc00630
Glyoxylate and dicarboxylate metabolism
omc00670
One carbon pool by folate
omc01100
Metabolic pathways
omc01200
Carbon metabolism
omc01230
Biosynthesis of amino acids
omc01240
Biosynthesis of cofactors
omc04981
Folate transport and metabolism
Module
omc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
131536424 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
131536424 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
131536424 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
131536424 (shmt1)
Enzymes [BR:
omc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
131536424 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
SHCBP_N
Motif
Other DBs
NCBI-GeneID:
131536424
NCBI-ProteinID:
XP_058625299
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Position
03:30538990..30544203
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AA seq
481 aa
AA seq
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MAQINGHNNKTWESHNKMMLEPLGTNDPEVYNIIKKEKKRQTYGLELIASENFTSRAVLE
ALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALKVYGLDPEKWAVNVQPYSGSPA
NFAIYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYIDY
NRLEENARLFHPRLIIAGTSCYSRNLDYSRLRKIADENGAYLLADMAHISGLVAAGVVPS
PFEYCDVVSTTTHKTLRGCRAGVIFFRKGVRSVDAKTGKETLYNLESLINQAVFPGLQGG
PHNHAIAGVAVALKQALTPEFKTYQLQVLANCRALAATLMEKGYKVVTGGSDNHLILVDL
RSNGSDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGLLEDDFRKVAE
FIHQGIELTLEIQRNMNPKATLKEFKDELAQNEKYKLKINEIRKGVEDFAGKFPMPGLPE
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatcaacggccataacaataaaacatgggaatctcataacaagatgatgctg
gaacctctgggcacaaatgatcctgaggtatataacataataaagaaggaaaagaagcgg
cagacatatggattagagctcattgcctctgagaacttcactagtcgggctgttttggag
gctctgggttcctgcatgaacaacaagtactctgaaggttatcctggtcagaggtattat
ggaggaacggagcatgtagatgaattggagcgtttgtgtcagaaaagagctctcaaggtg
tatggcctcgacccggagaaatgggcagtgaatgttcagccgtactctgggtcacctgca
aactttgccatatacacagccatagtggaacctcatgggcgcattatgggcctcgatctt
cctgatggtggccatctcacccacggcttcatgactgacaaaaagaaaatctcagccact
tccattttctttgagtcgatgccatataaggtcaatccagaaactggatacatcgattat
aacagacttgaggaaaatgctcgtcttttccacccaagactaatcattgcaggcaccagc
tgttattcccgtaacctggactacagtcgcctgaggaagattgcagatgagaatggagca
tatcttctggcagacatggctcacatcagtggtctagtcgcagcaggagtcgttccatct
ccgtttgaatactgtgacgttgtttccaccaccacccacaagaccttgaggggctgcagg
gcaggtgtcattttcttcaggaagggagttcgtagtgttgatgcaaagacgggcaaggag
accttgtataacctggagagtctgattaaccaggcagtgtttcctggactgcagggtggc
cctcacaaccatgccattgcaggggttgctgttgctttgaagcaggctctgactccagag
ttcaagacctatcaattgcaagttctagcaaattgcagggctttagcagccaccctaatg
gaaaagggctacaaagttgttacaggtggctcagataatcatctcatcttggttgatctg
cgttcaaatggaagtgatggaggaagagcagagaaagtactggaggcttgtgccattgcc
tgcaacaagaacacctgcccaggtgataaaagtgccttgcgccccagcggccttcgttta
gggtctccggctcttacatctcgaggactattggaggatgatttccgtaaagttgcagag
ttcattcaccaaggcattgagttgacattggagatccaaagaaacatgaatcctaaagca
actttgaaggagtttaaggatgaactggctcaaaatgagaagtacaaattgaaaataaat
gaaattcgaaagggagtcgaagactttgctggaaagttcccaatgcctgggttgccagag
ttgtaa
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