Onychostoma macrolepis: 131536427
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Entry
131536427 CDS
T09350
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omc01001
]
131536427 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131536427 (ciita)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
131536427 (ciita)
Protein kinases [BR:
omc01001
]
Serine/threonine kinases: Other
TAF1 family
131536427 (ciita)
Pattern recognition receptors [BR:
omc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
131536427 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
nSTAND_NTPase5
AAA_25
Pox_A32
TsaE
DO-GTPase2
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131536427
NCBI-ProteinID:
XP_058625306
LinkDB
All DBs
Position
03:39089339..39105102
Genome browser
AA seq
1148 aa
AA seq
DB search
MSLSRGCCPVMVPFEEVLFQVRKALQVSPILLHELLGELHEANVFSTQFYQSLYKDSEIG
EQSLCEAFCNDGEDLARRLSLPIWQNWDISQGILDLALSKEEDLVPSDAESQDIVPDPMS
ELLPENIISKYLESLESIEDDFDPSILYNFSGDIDTTSTPTPENATFPDEVPKKIPKVVA
KTPRRKRNKKATKYPESPSNGKTATITPESSFHLSSNPFQHVLHIPFSPSLLPSSGGSPL
QIIQTIGPYTPPLFGTVVPPGSTYVIVSPQCVSPGTQIIPLSPAIGTVAPPELIGSVPVG
SSSDSAWQGSPTVDTLSPTKDLQKNYDSTSPKTETKIRPEAPECVKDYIHHLKSFMRDVC
CSMRGGMGMESHYVDTHLVQRKLLIKSGKNANKCLEKELVVLSNSERKKAKLDRSQLFPN
SDSKPKQSVALLGKAGAGKTTFIQRLCLDWASGSLPQFQFVFLLNCKILDFTQSNYSLKG
LLFDLSMSPRCEDSDSVFKRILSCPDEVLIIFDSFDHIKDFEGLLQSPAKSHTNTKYTIK
QLFSGLFQKEILSGCKLLIATRPKDVLNQVLRKMDSLLELCGFSPEEIELYTSKHFGDAS
LQESALEQIKKDRYIFSLCSNPLLCWTTCFLLEHQESCNELPSTLTDLYQRATSKHLQLA
SLENSTLCKNRKQLDIPQLCKMAWEGFKNHDTHVNPASCTELLDCALKSGILTSYKTSEG
QENHFSDLFTQNLLSAVHLVQSKQVNEKMVVANSVVHQKKRKVQGESQDVLQRFIMGLIF
QKAPDGVSILDSSVNIKAKRKAVETHLESMKPNDLVPARLLELFHCVYETSSTKFAKLLL
KNLPDNLSFYGTQLCQSDVYVICHLLQYASTLKRTFSINLQDTCIPISGLKELVGLKCIK
EFWAHTADTIGLWEDLHQSNDELNLKSAIEKFTLHPFKATEGYHIESLPVLVQIHREKKL
PMSEFVSALDEGVPALRHLQRLEFELGVQNGPELLPKLVEVLPSLQSLQHLDLEKNQIGD
SGAEKLAGVLHFLECLKLLNLSQNLIGDAGVEKLAKALASVPSLQSLSLYGNAIADIGAE
HLALVLPDMNFLQDLDVKFNKFTDIGATKLSAALKNCTGMKSLEMWNDCIPYGVFEHLRL
QDPRIRSL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtctcgcggctgctgtccagtcatggttccgtttgaggaggtactgtttcag
gtgaggaaagctttacaggtcagccctatcctactgcacgagcttctcggagagctgcac
gaggccaacgtcttctctacccagttctaccagtctctctacaaggatagtgaaattgga
gagcagagtttatgtgaagccttttgtaacgatggagaagatctggccagaagactctct
ttgcctatctggcaaaactgggacattagccaaggcatcttggatttggcactctccaaa
gaggaagatttggttccttctgatgctgaatcgcaagatattgtcccagacccaatgtct
gaactcttacctgaaaatatcatctcaaaatatctcgagtcattggagtctattgaagat
gatttcgatccgtccatcctttataacttttcaggtgacatagacacaacctccacgcca
acaccagaaaatgctactttcccagatgaagtgccaaaaaaaataccaaaagttgttgca
aaaaccccccgcagaaaacgcaacaaaaaagcaacaaagtaccctgaaagtccctcaaac
ggaaagacggccaccattacccctgagagtagtttccatctgagctcaaacccattccag
catgtattacatattcccttcagcccctctcttctcccctctagtggaggttcaccacta
caaatcatccagaccattggcccttatacaccacctctattcggcactgtggttccacca
gggtctacgtacgtgattgtctcgccccagtgtgtgagtccaggcactcagataattcct
ctttcacctgccattggcacagttgccccgccagaactcattggttctgttcctgttggc
tcatcctcagacagcgcatggcagggttcgccaacagtagacacactctcccctacaaaa
gacctacaaaaaaactacgattccacatctccaaaaaccgaaacgaaaatccgcccagaa
gcaccagaatgtgttaaggactacatacatcacctaaaatctttcatgagagatgtctgc
tgctcaatgcgtgggggaatgggaatggagtcacactacgtggacacgcatctggttcag
agaaaactccttatcaaatctggcaagaatgcaaacaaatgtctggagaaagagctggtc
gtccttagtaattcagagcgaaagaaagcaaagctggacagaagccagttgtttccaaac
agtgattccaaaccaaaacagtctgtcgctctccttggaaaagccggagcggggaaaacc
acgttcattcagcgtttatgcttggactgggcaagtggcagcctgcctcaatttcagttt
gtttttttgttgaactgtaaaattttagacttcacacaatcaaactacagcttgaaaggc
ttgctgtttgatttgtctatgtctcctcgctgcgaagactcggactctgtgttcaaacgc
attctgtcctgccctgatgaagttcttattatcttcgacagctttgatcacattaaagac
tttgaggggcttctccagtcccctgctaaatcacacacaaacactaaatacacaatcaaa
cagctattttctggtttgttccaaaaggaaatcctctcgggctgcaagcttctcatcgct
acgaggcctaaagacgttttaaatcaggttctgcgaaaaatggacagccttttggagctt
tgtggcttctctcctgaggaaattgagctgtatacgtcaaaacattttggagacgcttcc
ctccaagaaagtgcactagaacagattaagaaggacagatacatattcagtctatgctcc
aacccgctgctttgttggactacctgcttcctgcttgagcaccaagaaagctgcaatgaa
ttgccttcaaccctcacggatttgtaccaaagagcgacctcaaagcatctacaactagct
agccttgaaaacagcacattgtgtaaaaacagaaaacagctggacatcccacaattgtgc
aaaatggcatgggagggattcaagaatcatgatacgcatgtaaatcctgccagctgtaca
gagctgctggactgcgctcttaaaagtggcatacttacatcctacaaaacatctgagggt
caggaaaaccacttttcagaccttttcactcagaacctcctgagcgctgtgcacctggta
cagtctaaacaggtgaacgaaaaaatggtggtggcaaacagcgtagtccatcagaagaaa
cgaaaggttcagggagagtcgcaggacgtgctgcagaggtttatcatgggcttgatcttc
cagaaggctcctgatggagtcagcatcctggacagcagtgtcaacataaaagccaaaaga
aaggctgtcgaaacccatctggagagcatgaagcctaatgatttggttcctgccaggtta
ctagaactgttccattgtgtttatgagaccagcagcaccaaatttgccaaactgctgttg
aagaacctgcccgacaatctgtcattctatgggacgcagctttgccaatcggacgtgtat
gttatatgccatctccttcaatatgccagcacactgaagcggaccttctctattaacctg
caagatacatgcattcccatcagtggcctgaaagagcttgtgggactcaaatgtatcaaa
gaattctgggcacatacagcagacaccattggattatgggaggacttgcaccaaagcaat
gatgaactgaacctgaaaagtgccattgagaaattcaccttgcacccattcaaggcaacc
gaagggtatcacatcgagagcctgcctgtccttgtccaaattcacagagagaagaagcta
ccaatgagtgaatttgtgtctgcactggatgaaggtgtgccagccctccggcatcttcag
agactggaatttgagcttggagtccagaacggtcctgaacttctccctaaactcgtagag
gtcctgccttctctgcagtctctccaacatctggaccttgagaaaaaccaaataggagac
tctggagctgagaagctagctggcgttttacattttttggaatgtctgaaattgctaaat
ctgtctcaaaacctcattggagatgcaggagtggagaaactagctaaagctttggcatca
gtcccttctctacagagcctcagcctttatggaaatgcaattgctgacattggagctgaa
cacctggccttggtattaccagacatgaatttcctgcaggacctggatgttaagttcaac
aagttcacagacattggagctacaaagctcagtgctgctctgaaaaactgcacaggaatg
aagtccctggagatgtggaatgactgcattccatatggagtttttgaacacctccgtctt
caagatccacggataagatcactttaa
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