Onychostoma macrolepis: 131536752
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Entry
131536752 CDS
T09350
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
omc04137
Mitophagy - animal
omc04144
Endocytosis
omc04340
Hedgehog signaling pathway
omc04350
TGF-beta signaling pathway
omc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131536752 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
131536752 (smurf1)
04350 TGF-beta signaling pathway
131536752 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131536752 (smurf1)
04137 Mitophagy - animal
131536752 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
131536752 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131536752 (smurf1)
04121 Ubiquitin system [BR:
omc04121
]
131536752 (smurf1)
03029 Mitochondrial biogenesis [BR:
omc03029
]
131536752 (smurf1)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131536752 (smurf1)
Membrane trafficking [BR:
omc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
131536752 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
131536752 (smurf1)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
HECT type E3
131536752 (smurf1)
Mitochondrial biogenesis [BR:
omc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131536752 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
131536752
NCBI-ProteinID:
XP_058625830
LinkDB
All DBs
Position
03:30259441..30304114
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPIQMEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttctttcggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacagtcaaaagcacattggacccc
aagtggaatcagcattacgacctgtatattgggaagaccgattccatcaccattagcgta
tggaaccacaagaagatccataagaagcagggtgcgggtttcttaggctgtgtgcggctc
ctgtccaatgccatcagcagactaaaagacactggctaccagcgtttagacttatgcaag
ttgaacccatctgacagtgatgcagtccgtggacaaatcgttgtgagtctgcagaccaga
gacagaattggcagtggagggcctgtggtcgactgtagaggactggtagagaatgaagga
cctgtctttgaagactcggggcccgggcggcctctcagctgcttcatggaagagcccatg
ccgtacacagatcctacaggagccgctggcgggggcaactgccgtgcacttgagtcgccc
aatcaggagcaacggctccaagcacaacgcattagaaaccaagattcccgagggcatgca
cacaccccccaaaacagaccacacggacaccagtcccccgacctccctgagggttacgag
caaaggaccaccgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcatgatcccagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccaacactct
caggtgaaggagtcaagccaggctctgcccatacagatggaagttggaatggaggaaggt
gatggcgagttaccggtgcgctacgaaagagatttggttcagaaactcaaagttctccgc
catgagctctccctgcagcagcctcaagccggccactgccgcatagaagtgtcccgtgag
gagatctttgaggagtcttatagacagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagttcagaggagaggaggggctggattacggtggagttgctagggaa
tggttgtatctcctctgccatgagatgctgaatccatactacggcctgtttcagtactcg
actgataacatctacacactacagatcaacccagactcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccatgggcactacatc
aatggaggcttcaccttgcccttctacaagcagctcctggggaagcccatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatactagagaatgac
atcacatctgttttggaccacaccttctgcgtggagcataatgcttttggtaaatttctc
caacatgagctgaaaccaaacggcaagaacatcccggtcacagaggagaacaagaaagaa
tatgtgaggctttatgtcaactggagattcatgcgaggcattgaggcccaattcctcgcc
ctgcagaagggcttcaacgaactcataccacagcatctgctcaagccttttgacaacaag
gaacttgagctgatcatcggaggtttgggcaagatcgatctgaacgactggaaggccaac
acacggttgaagcactgtgtagctgacagtaacatagtgaagtggttctggcaggcggtt
gaatcgtttgacgaggagaggagaggcagattgctacagttcgtcacaggctccacacgc
gtccctctacaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacctgcccaaagcccacacatgcttc
aaccggatcgacatcccgccttacgagtcatacgagaagctctatgagaagctcctgaca
gccgtggaggagacatgtggctttgcagtggagtga
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