Onychostoma macrolepis: 131537008
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Entry
131537008 CDS
T09350
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131537008 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131537008 (smarca4a)
03036 Chromosome and associated proteins [BR:
omc03036
]
131537008 (smarca4a)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131537008 (smarca4a)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131537008 (smarca4a)
Chromatin remodeling factors
BAF complex
131537008 (smarca4a)
PBAF complex
131537008 (smarca4a)
GBAF(ncBAF) complex
131537008 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
131537008
NCBI-ProteinID:
XP_058626198
LinkDB
All DBs
Position
03:20823823..20846994
Genome browser
AA seq
1625 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPSSGHPLPPQG
PSGYPQDNMHQMHKPMEGMHEKGIPEDQRYGQMKGMGMRQGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPSGPGAMEGGDPQAMGQQNRSGGAGGVAVSGPSGG
PPNAGGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARGQALPDHLQMAVQGKRPMPGMQPG
MPNMPPASGQGAGPPGPGGPGPGGPNYNRPQGMVGPNMPPPGPSGVPPGLQGQPTNGPPK
SWPEGPMVNAAAPASAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPTQPPMV
LHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKANIEL
KALRLLNFQRQLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQ
ERKRRQKHQEYLNSILQHAKDFKEYHRSITAKMQKLTKAVATYHANTEREQKKENERIEK
ERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKDKKKKK
KKKKPENAEGGAPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGMDAPKAGQLDTWLE
MNPGYEVAPRSDSEDSGSEEEEEEDEEQPQSSQAPTEEKKIISDPDSEDVSEVDARHIIE
HAKQDVDDEYGNAAFVRGLQSYYAVAHQVTEKVDRQSSLLINGQLKQYQIKGLEWLVSLY
NNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPSV
VKVSYKGSPAARRAFVPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNH
HCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAM
TGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR
HMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGI
VQGPDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGT
TKAEDRGTLLKNFNDPSFNYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDR
AHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQA
ILEHEEQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRKPRLMEEDE
LPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEE
EVRYKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDSKKQKKRGRPPAEKLSPNPPTLT
KKMKKTVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYR
TLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESEGEESEEEED
EVDEESESESRSVKVKIKLSRKEKVERGKGRRRTGRNWRPKPVVSDDDSEEDQEEEHSAS
GSDED
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgacccacctatgggcgggacccctcggccgggtccttccccaggccct
gggccatctccaggggccatgttagggcctagtcctggaccctcacctggctctgctcat
ggcatgatgggccccagccctgggcccccctcctcaggacacccactacctccacagggc
ccctcaggttacccccaggacaacatgcaccagatgcacaagcccatggaaggcatgcat
gagaaaggcattcctgaagatcaacgctacggtcaaatgaagggtatgggcatgagacag
ggtggccacagtggcatgggacctccaccgagtcctatggaccaacactctcaaggttac
ccctctcctctgggtggttctgaacatgcccccagcccggtacctgctaacggccctcca
tctggccccatgatgccctctggtcctggtgcgatggagggcggtgacccacaggccatg
ggtcagcagaaccggagcggaggtgccggtggtgttgcagtttcgggacccagcggagga
cctccaaatgcaggaggacctggtggcgccggcggacccactccttttaaccaaaaccag
cttcaccaactgcgggcacagatcatggcctataagatgctggcacgtgggcaagctcta
cctgaccacctccagatggcggtgcagggaaaacggcccatgccaggcatgcagccgggg
atgcccaacatgccccctgcctcaggacaaggagcaggaccacctggaccaggaggccct
ggacctgggggacccaactacaatagaccacaaggaatggtcggaccaaacatgcctcct
ccaggaccttctggtgttcctccaggcctgcagggacaacccaccaatggaccacctaaa
tcctggcctgaagggcccatggtgaatgctgccgcccctgcaagtgccccacagaagctg
atacctcctcagcccacgggccgcccgtctccagcaccaccttcggttcctcccgccgcc
tcgcccgtcatgccccctcagacccaatctccaggacaaccgacccagccgcccatggtg
cttcatcagaaacagaaccgcatcacacccatccagaaaccccggggtctggacccagtg
gagatcctccaggagagagagtataggttacaggctcgtattgctcatcgtattcaggag
ctggagaaccttccaggctctctggctggagacttgaggaccaaagccaacattgagctc
aaggcactcaggctcctgaactttcagagacagctccgccaggaggttgtagtgtgtatg
aggcgtgacacggccctggagacagcgctgaacggcaaggcctacaagcgcagcaagaga
cagtccctgcgtgaggctcgtatcacagagaaactagagaaacagcagaagatcgagcaa
gaacgcaagcgccgtcagaaacatcaggagtatctcaacagcatcctgcagcatgcaaag
gacttcaaggaatatcatcgctccatcaccgcaaagatgcagaagttgaccaaagctgta
gccacgtaccacgccaacactgagagagagcagaagaaggagaatgagcgtatcgagaag
gagagaatgagaaggctgatggctgaagatgaagagggttacaggaagctgatcgatcag
aagaaggacaaacgtctggcttacttgctgcagcagacggacgagtatgtggccaacctc
acagagcttgtcagagctcacaaagctgtccaggccctcaaagacaagaagaagaagaag
aaaaagaagaagccagagaacgctgagggtggagctcctgctttgggtccagatggagag
cctctggatgagaccagtcaaatgagtgacctaccggtgaaggtgattcacgtggacagt
gggaagatcctcaccggcatggacgctcctaaagctggacaactggatacctggctggag
atgaatcctgggtacgaggtggccccgcggtctgatagtgaagacagtggctcggaggag
gaagaggaggaggacgaggagcagcctcagtcgtctcaggccccaacagaggagaagaag
attatttcagatccagacagtgaggatgtgtctgaggtggacgcccgtcacatcattgag
catgcaaagcaggatgttgatgatgaatatggtaatgcagcattcgttagaggcctgcag
tcgtactatgccgtggctcaccaagtcacagagaaggtggacagacagtcaagcctgtta
ataaatgggcagctcaaacagtaccagatcaaaggtctggagtggctggtgtctctgtat
aataacaacttaaatggcattctggctgatgaaatgggtttgggaaaaaccatccagacc
attgcactcatcacctacctcatggagtacaaacgcctcaacggacccttcctcatcatc
gtccccctctcgacactgtcaaactgggtgtacgagtttgataagtgggctccatctgtg
gtgaaagtttcttataagggctctcctgctgctcgccgtgcttttgttccaattttgcgc
agcggcaagttcaacgtgctggtcaccacttacgagtacatcatcaaagacaagcaagtg
ctggctaagcttcgttggaagtacatgatagtggatgaaggtcaccgtatgaagaatcac
cactgcaaactgactcaggtgttgaacacacactacctggcaccccggcgtgtgctgctc
accggaacgcccctgcagaacaagctgcccgaactgtgggcgctgctcaacttcctgctg
cccaccatcttcaagagctgcagcaccttcgagcagtggttcaacgctccgttcgccatg
accggagagaaggtggacctgaacgaagaagagaccattctgatcatccgtcgtctgcac
aaagtgctccgccccttcctgctcaggagactcaagaaagaagtggaggcccaactgccc
gagaaggtggaatatgtgatcaagtgcgacatgtcggctctacagagagtgctatacaga
cacatgcaggctaaaggagtgctgctcactgatggctctgagaaagacaagaagggtaaa
ggtggcactaagactctgatgaacactattatgcagttgaggaagatttgcaaccaccct
tacatgttccagcacattgaggaatctttctctgagcacttgggcttcactggaggcatt
gttcagggacctgatttgtaccgtgcctccggtaagtttgagctgctggaccgcatcctg
ccgaagctccgcgccaccaaccacaaagtgctactcttttgtcagatgaccacgctcatg
accatcatggaggactactttgcctaccgcaacttcaaatacctgcgcttggacggaacc
actaaggctgaggatcgtggcacattgctgaagaactttaatgatccatcctttaactac
tttatcttcttgctgagtaccagagcaggaggtctggggctgaacctgcagtctgctgac
actgttatcatctttgacagcgactggaaccctcaccaggatctacaggcccaggatcgc
gcccatcgtatcgggcagcagaacgaggtgcgtgtgctgcgtctgtgcaccgtgaacagc
gtggaggaaaagatcctggccgctgccaaatacaagctgaacgtggaccagaaggtcatc
caggccggtatgtttgaccagaagtcgtccagccacgagcgcagagctttcctgcaggcc
atcctggagcacgaagagcaggatgaggaggaagatgaagtgccagatgatgagaccgtt
aatcagatgatcgctagaagcgaggaagagttcgatcacttcatgcgcatggatctcgac
cgccgtcgtgaagaggctcgtaaccctaaacgcaagccccggctgatggaggaggatgag
ctgcccacctggatcatgaaggatgatgcagaggtggaaaggctcacctgcgaagaagaa
gaagagaagatgttcggccgtggctcccgtcaaagaaaagaagtggactacagcgactcc
ctcacagagaaacaatggctgaaggccattgaggaaggcacccttgatgagattgaagaa
gaggtgcgctacaagaaaacgacccggaaaaggaagcgcgaccgtgaccttgaccttcca
ggcccggccacgcccagctccagtgggcggagcagagataaagatgacgatagtaagaag
caaaagaaacgaggtcgtcctcctgctgaaaagctctctcctaaccctcccacactcacc
aagaagatgaagaagactgtggatgcagtaatcaaatacaaggatggcaatggaagacaa
ctgagcgaggtgtttattcaactgccgtctcgtaaagagctgccagaatattacgaactc
atacgcaaacctgtggacttcaggaagatcaaggaacgtattaggagtcataagtaccgc
actctgaatgacctggagaaagacgtcatgcttctctgtcagaacgctcaaaccttcaac
ctggagggatcactgatctacgaggactccattgtgctgcagtctgtgttcaccagcgtg
cggcagaagattgagaaagaggaagagagcgagggagaagagagtgaggaggaagaggat
gaggtagatgaggaatcggagtctgaatctcgttcggtgaaggtgaagataaagctgagt
cgaaaggaaaaggtggagagaggaaagggaagacgccgaaccggacgcaactggcgccct
aaacctgttgttagtgacgacgatagtgaggaggaccaggaagaggagcattcggctagt
ggcagtgacgaagattaa
DBGET
integrated database retrieval system
