Onychostoma macrolepis: 131537297
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Entry
131537297 CDS
T09350
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131537297 (ddx39ab)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131537297 (ddx39ab)
Spliceosome [BR:
omc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131537297 (ddx39ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131537297
NCBI-ProteinID:
XP_058626586
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All DBs
Position
03:46438351..46446376
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDDEPQGAPESAVPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgatgttgacaacgagctgctggattatgaagaggacgatgagcctcaa
ggagccccggagagtgctgttccagtgggcaagaaggaggtgaagggctcgtacgtgtcc
atccacagctctggcttcagagactttctgctcaagccggagctgctgagggccatcgtg
gactgtggttttgagcatccgtctgaagtgcagcacgagtgcatcccgcaggctattctt
ggcatggatatcctgtgtcaggccaagtctggtatgggaaagacagccgtgtttgtgctc
gctaccctacagcagatcgagccggtggacggacaggtgtctgtgctggtcatgtgtcac
acgcgtgagctggcctttcagatcagtaaggagtacgagcgtttctccaagtacatgccc
accgtgaaggtggcagtgttcttcggcggcatgtccatcaagaaggacgaggatgtcctg
aagaagagctgccctcacatcgtggtcggcacgccgggacgaatcctcgctctggtccga
aacaaaaccctgaacctgaagaacgtcaagcactttgttctggacgagtgtgacaagatg
ctggagcagctggatatgagacgtgacgttcaggacatcttcagactgacccctcatgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagattcggcccgtctgccgcaag
ttcatgcaggatccgatggaggtgtttgtggacgatgagacgaagctgactcttcacggt
ctgcagcagtactactgcaaactgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgctggagttcaaccaggtggtgatatttgtgaagtctgttcagcgttgtgtg
gcgctttcacagttactggtggagcagaacttccccgccatcgccatccacagaggaatg
gcacaggaagagaggttgtctcggtatcagcagtttaaagactttcagaggaggatccta
gtggccacaaacctttttgggcgaggaatggatattgagagggtcaacatcgtcttcaac
tacgacatgccagaggactctgacacgtatctccacagggtggctcgtgcgggtcgcttc
ggcaccaagggtttggctgtcacatttgtgtcagatgagaccgacgcaaagatcctgaac
gatgtgcaggaccgattcgaggtcaacgtggctgagttaccggaggagattgacatttcc
acttacattgaacagtccagatga
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