Onychostoma macrolepis: 131537415
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Entry
131537415 CDS
T09350
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131537415 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131537415 (ddx5)
03009 Ribosome biogenesis [BR:
omc03009
]
131537415 (ddx5)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131537415 (ddx5)
Spliceosome [BR:
omc03041
]
Complex A
U1 snRNP components
U1 related factors
131537415 (ddx5)
Complex B
131537415 (ddx5)
Ribosome biogenesis [BR:
omc03009
]
Eukaryotic type
Pre-60S particles
Helicases
131537415 (ddx5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
BNIP2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
131537415
NCBI-ProteinID:
XP_058626776
LinkDB
All DBs
Position
03:21630308..21635576
Genome browser
AA seq
612 aa
AA seq
DB search
MPGYSDRDRGRDRGYSSGPPRFGGSRGGPPQGKKFGNPGDRLRKKHWNMDELPKFEKNFY
QEHPEVARRSTQDVEHYRRTKEITVKCRDCPKPIVKFHEANFPNYVMDVIGKQNWTDPTP
IQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTREL
AQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQ
INVGALQLSANHNILQIVDVCNDGEKEDKLMRLLEEIMSEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINYDYP
NNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDRG
GRSRGGRGGGYRDDRRDRHSGGRRDFNSYGQDNRNGDSYGQKKVFGNKTQNGSSGYNSSS
SSSFSGGYSNNGQGNFGNQSGGYGNQGYQNQQFAPNQGAVQNGMNHPPPFPFNPQQMPQS
MPFPMAPPAFPQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggtcgtgacagaggttacagcagtggtccccca
cgctttggaggcagcagaggtggacctcctcagggcaagaagtttgggaatcctggtgat
cgtctgcggaaaaaacactggaacatggatgagctccccaagtttgagaagaacttctat
caggagcatcctgaagttgctcggaggtcaactcaagatgttgaacactacaggagaacc
aaggagatcacagtgaagtgccgagactgtcccaaacccattgtgaagttccatgaagca
aactttccaaactacgtaatggatgtgatcggtaaacagaattggactgatccaactccc
atccaagctcaggggtggccagttgcactgagtggcaaagatatggttggcattgcacag
accggctctggaaaaactctctcgtatctgcttcctgctatcgttcacataaaccaccaa
ccattcctggagcgtggcgatggtcccatttgcttggtgttggctcccacccgtgaattg
gcgcagcaggtccagcaggtggcggcagagtacggcaaagcttctcgtctcaagtccacc
tgcatctatggaggtgctcccaaaggaccacagatccgggacctggaaaggggtgtcgag
atttgtatcgccacacccggaagactcatcgatttccttgaagctggaaagacaaatctg
cgcagatgcacgtatcttgtgcttgatgaagctgacaggatgcttgacatgggatttgaa
cctcagattcgaaaaatcgtggaccaaattagaccggaccgacagactctcatgtggagt
gctacgtggcccaaagaggtgaggcagctggctgaggacttcctgaaggactatgtacag
atcaacgtcggtgctctgcagctcagcgccaaccacaacatcctacagattgtcgacgtt
tgcaacgacggcgaaaaggaagacaaactgatgcgcctgctggaggaaatcatgagcgag
aaggagaacaagaccattatttttgtggagaccaagaaaaggtgtgacgatctcaccagg
aggatgcgtagggatgggtggccagccatgggcatccatggagacaagagccaacaggaa
agagactgggtgctcaatgaattcaaatatggcaaagcgcccatcctcattgccacagat
gttgcctccagaggactagatgtggaggatgtcaaatttgtcattaactatgactacccc
aacaattccgaggactacattcaccgcattggccgtacggctcgcagtcagaaaaccggc
acagcctacactttctttacacccaacaacatgaaacaggctcacgacctcgtctcggtc
ctccgcgaggccaaccaagccataaaccccaagctcatccaaatggccgaagacagagga
ggtcgttcaaggggaggtcgaggtggagggtatagggacgaccgtcgggatcgccactct
ggcggcaggcgggacttcaacagctacggccaggataaccgcaacggtgactcttatggg
cagaagaaggtgtttggaaacaaaactcaaaacggatctagcggttacaatagcagcagc
agtagcagctttagcgggggttacagcaataacggacagggtaacttcggcaatcagtct
ggtgggtacggaaaccaaggctatcagaaccagcagtttgctcccaaccaaggggccgtc
cagaacggcatgaaccaccctccaccgttccctttcaacccccaacagatgccacagtcc
atgccgttccctatggctccacctgcgttccctcagtaa
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