Onychostoma macrolepis: 131537484
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Entry
131537484 CDS
T09350
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
omc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131537484 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
131537484 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131537484 (mgrn1b)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131537484 (mgrn1b)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131537484 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
131537484
NCBI-ProteinID:
XP_058626943
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Position
03:26907912..26925536
Genome browser
AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTDEGAKPRALYGV
EFTFDSDARVAITIYCQAFEEFSNGMAIYSPKTPTLVSETVYYKRGVSQQFTLPSFKIDF
SEWKEEDLNFDLDRGVFPIVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSSSDSVPP
GFEPISLLEALNGLGAVSPGLPSAPLYDEINFSGSLSGESRQLSSPDHSGDSGGQKSKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQAHMLLSSSPAPTEGTAGEDAPDSLSPEDEDR
LNLEEEVMNDCSSEHSSLTKTESDPPGDLSLPGLSGSMESLNTQSTCCSSQPLLGPSSHL
HMDDDELDV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaattcttagtcgaagaatcgctggtgttgaagacatcgacatccaggccaat
tctgcttacagatatcctccaaaatcaggaaactattttgccagccattttttcatggga
ggagagaagtttgacactcctcatccagagggttacctttttggagaaaatatggatctc
aactttcttggtaaccgcccagtgcagtttccctatgttactccagcaccccatgagcca
gtcaagacattgagaagtcttgtcaacatcagaaaagactcgttacgattggtcaggtat
aaagatgatgctgatagtcctactgatgaaggagcaaaaccaagggccttatatggagtg
gagtttacctttgactctgatgcacgagtggccatcactatctactgtcaggcttttgag
gagttctccaatgggatggcaatatacagcccaaaaacccccacattggtctctgaaacc
gtatattacaaaagaggggttagccagcagtttaccctgccatccttcaagatcgatttc
tctgaatggaaggaagaagatctcaactttgatttagacagaggtgtttttcccattgtg
attcaggctgtggttgatgaaggagatgattgtttgggacatgcccatgtactgctggca
gcatttgaaagacatgttgatggcagtttctcagtcaaacctttgaaacagaaacaaata
gtggaccgtgtcagctacttgttacaggagatatatggaattgagaacaagaacaatcaa
gagacaaagccatccgatgatgagaacagtgacaacagcaacgagtgtgtggtgtgtctt
tcagatctgcgggacactctgattttgccctgtaggcacttgtgcctgtgtaactcctgc
gctgatactctgcgctaccaggccaacaattgcccgatctgccgactgccatttcgagct
cttcttcagattcgagctgtaagaaagaagcctggagcgctttctcctgtttccttcagc
ccagtgctggctcagagcatggatcacgatgagcactcaagctcagactctgttccccct
gggtttgagcccatctcgctgctagaggctttgaacggtcttggtgccgtgtcccccggc
cttccatctgcacctctgtatgacgagatcaacttctctgggagcctgagtggagagagc
aggcagctgagctcacctgaccactctggagacagcggcggacagaagagcaaagtcagc
aagtcaccagacagcactctacgctctccatcgtcacccattcaggaggaggatgaagaa
aaactgtctgagatgtctgatgcacaagctcacatgctgctgtccagcagtcctgccccc
actgagggtacagctggggaggatgcccctgattcactgtctcctgaagatgaggatcga
ttaaatttggaggaagaggtgatgaatgactgcagcagtgagcacagcagccttaccaaa
actgaaagtgacccacctggagacttgtccctccccggattatctggttcaatggaaagt
ctgaacactcagagtacttgctgctccagtcagccgctcctgggtccctcaagccatttg
cacatggacgatgatgaactggatgtttaa
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