Onychostoma macrolepis: 131538039
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Entry
131538039 CDS
T09350
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
omc03015
mRNA surveillance pathway
omc03040
Spliceosome
omc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131538039 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
131538039 (alyref)
03015 mRNA surveillance pathway
131538039 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131538039 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131538039 (alyref)
03041 Spliceosome [BR:
omc03041
]
131538039 (alyref)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131538039 (alyref)
TREX complex
131538039 (alyref)
Spliceosome [BR:
omc03041
]
Complex C
Other components
EJC/TREX
131538039 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131538039 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
131538039
NCBI-ProteinID:
XP_058627814
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All DBs
Position
03:18415245..18419331
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AA seq
285 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQRGGGGRGGGGGRGGRGGRGGAGGGRGVGAGGRLGNTGGGFGG
RGGGSGPMRNRQNLSRGRSRPTPYSRPKQLPDKWQHDLFDNGYSTNAGGGGGGGGGGAGV
ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKA
MKQYNGVPLDGRPMNIQLVTSQIDAQRRTPMQGLNRGGGGMNRNRIGSFGAQKGRGGRGG
GGGGGGGARGRGRGGRGGGGSSKQQLSAEELDAQLDAYNARMDTS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagatggatatgtccttagacgacatcatcaagcaaaaccggcagcgcggg
ggcggcgggcgcggcggcggcggcgggagaggaggccgcggcggccgcggaggcgcaggc
ggaggccgcggtgttggcgccggcgggcgcctcggaaacacaggcggaggctttggaggc
cgcggcgggggatcgggccccatgaggaaccgccagaacctgagccgcggaagaagcaga
cctacgccgtacagcaggcccaagcagctcccagacaagtggcagcatgacctgtttgac
aacggctacagtacgaacgctggcggtggaggcggaggcggcggtggtggagcgggcgtg
gaaaccggaggaaagctcctcgtgtccaatctcgacttcggcgtctccgatgcagacatt
caggaactcttcgctgaatttggcactttgaagaaagcagcagtacattacgatcggtca
ggacgcagcctcggcactgcagatgttcactttgagaggaaagcagacgccctgaaagcc
atgaagcagtacaacggtgttccgcttgatggtcgcccaatgaacattcagctcgttaca
tcacagatcgacgcacagaggcgaactccgatgcagggtctaaatcgtggaggtggtggc
atgaacagaaacagaattgggagctttggtgctcagaaaggtcgcgggggacgtggtggt
ggtggtggtggtggtggaggagccagaggtcgggggcgaggcggtcgaggaggcggcgga
agcagcaaacagcagctctctgctgaagagctggacgcccagctagatgcctataacgcc
aggatggataccagctaa
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