KEGG   Onychostoma macrolepis: 131538039
Entry
131538039         CDS       T09350                                 
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
omc  Onychostoma macrolepis
Pathway
omc03013  Nucleocytoplasmic transport
omc03015  mRNA surveillance pathway
omc03040  Spliceosome
omc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131538039 (alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    131538039 (alyref)
   03015 mRNA surveillance pathway
    131538039 (alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    131538039 (alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131538039 (alyref)
   03041 Spliceosome [BR:omc03041]
    131538039 (alyref)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131538039 (alyref)
    TREX complex
     131538039 (alyref)
Spliceosome [BR:omc03041]
 Complex C
  Other components
   EJC/TREX
    131538039 (alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131538039 (alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 131538039
NCBI-ProteinID: XP_058627814
LinkDB
Position
03:18415245..18419331
AA seq 285 aa
MADKMDMSLDDIIKQNRQRGGGGRGGGGGRGGRGGRGGAGGGRGVGAGGRLGNTGGGFGG
RGGGSGPMRNRQNLSRGRSRPTPYSRPKQLPDKWQHDLFDNGYSTNAGGGGGGGGGGAGV
ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKA
MKQYNGVPLDGRPMNIQLVTSQIDAQRRTPMQGLNRGGGGMNRNRIGSFGAQKGRGGRGG
GGGGGGGARGRGRGGRGGGGSSKQQLSAEELDAQLDAYNARMDTS
NT seq 858 nt   +upstreamnt  +downstreamnt
atggcagacaagatggatatgtccttagacgacatcatcaagcaaaaccggcagcgcggg
ggcggcgggcgcggcggcggcggcgggagaggaggccgcggcggccgcggaggcgcaggc
ggaggccgcggtgttggcgccggcgggcgcctcggaaacacaggcggaggctttggaggc
cgcggcgggggatcgggccccatgaggaaccgccagaacctgagccgcggaagaagcaga
cctacgccgtacagcaggcccaagcagctcccagacaagtggcagcatgacctgtttgac
aacggctacagtacgaacgctggcggtggaggcggaggcggcggtggtggagcgggcgtg
gaaaccggaggaaagctcctcgtgtccaatctcgacttcggcgtctccgatgcagacatt
caggaactcttcgctgaatttggcactttgaagaaagcagcagtacattacgatcggtca
ggacgcagcctcggcactgcagatgttcactttgagaggaaagcagacgccctgaaagcc
atgaagcagtacaacggtgttccgcttgatggtcgcccaatgaacattcagctcgttaca
tcacagatcgacgcacagaggcgaactccgatgcagggtctaaatcgtggaggtggtggc
atgaacagaaacagaattgggagctttggtgctcagaaaggtcgcgggggacgtggtggt
ggtggtggtggtggtggaggagccagaggtcgggggcgaggcggtcgaggaggcggcgga
agcagcaaacagcagctctctgctgaagagctggacgcccagctagatgcctataacgcc
aggatggataccagctaa

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