Onychostoma macrolepis: 131538110
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Entry
131538110 CDS
T09350
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
omc
Onychostoma macrolepis
Pathway
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131538110 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131538110 (cpsf4)
03019 Messenger RNA biogenesis [BR:
omc03019
]
131538110 (cpsf4)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131538110 (cpsf4)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131538110 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
131538110
NCBI-ProteinID:
XP_058627947
LinkDB
All DBs
Position
03:complement(30528065..30531179)
Genome browser
AA seq
273 aa
AA seq
DB search
MQELIACVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGAAEQPP
LPQQAQSQQKFNFQQQNMQPINRLSQSLIQLTNTNINNNQRMPNAVGIVHSNNNMGGPRG
PRPLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcgtgtgtcgatcatatcaagtttgatctagaaattgctgtagaa
caacaattaggcgctcaaccattgccttttccaggaatggataaatctggcgcagctgta
tgcgagttcttcatgagagctgcctgtatgaaaggtggaatgtgtcctttccgacacatc
agtggagaaaagactgtggtgtgcaagcactggcttagaggtttatgcaagaaaggagac
caatgtgaatttttacatgagtatgatatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgcccgtggtatgatagggggttttgtaagcatggtccggattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggcttctgcccggagggcaag
tcatgcaaatttatgcacccaagatttgaactccctatgggtgctgctgaacagccacca
ttaccacaacaggcacagtctcagcaaaagtttaatttccagcagcaaaacatgcagccc
ataaacaggttatcacagtcactcatccagttaaccaacaccaatatcaacaacaaccag
agaatgccaaatgctgttgggatagtgcactctaataacaacatgggtggacctcgcggt
cctcgtccactggatcaagttacatgctacaagtgcggtgagaagggccattacgcaaac
aaatgcacaaaaggacacctggcttttttgagtggacagtaa
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integrated database retrieval system
