Onychostoma macrolepis: 131538301
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Entry
131538301 CDS
T09350
Symbol
smo
Name
(RefSeq) LOW QUALITY PROTEIN: protein smoothened
KO
K06226
smoothened
Organism
omc
Onychostoma macrolepis
Pathway
omc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
131538301 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omc04030
]
131538301 (smo)
G protein-coupled receptors [BR:
omc04030
]
Frizzled / Smoothened family
131538301 (smo)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
131538301
NCBI-ProteinID:
XP_058628093
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Position
04:complement(25638253..25647883)
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AA seq
822 aa
AA seq
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MSSKRLCSIVGGFWMLWIWAETSIIAQAVILHPNETIFNDFCKKSTTCEVLKYNTCLGSP
LPYTHTSLILAEDSETQEEALEKLAMWSGLRNAPRCWAVIQPLLCAIYMPKCENGKVELP
SQHLCQATRKPCSIVERERGWPNFLKCENKEQFPKGCQNEVQKIKFNTSGQCEAPLVKTD
IQASWYKDVEGCGIQCNNPLFTEDEHSDMHNYIAIFGSITLLCTFFTLATFLADWKNSNR
YPAVILFYVNACFFIGSIGWLAQFMDGARKEIVCKSDDTMRLGEPSSTETLSCVIIFVIV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLYGKTSYFHLVTWSIPFILTVAILAIAEV
DGDSVSGICFVGYKNYRFRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECAIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPK
RIKKSKMIAKAFSKRKELQKDPEKELSFSMHTVSHEGPVAGINFDLNEPSMEMSSAWAQH
VTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKKKKRRKEIR
PTGPAADEGNPAYHRREFGPSSVPRLPKLPGHRSLVANLWEQQRQQQEEQDMLPGAFPEF
RPXCPLPYQERYGGLGYLHNKPSSLPLANPLTLRDSMQDDLGGFQQSSWQPNGVFRYLGQ
EASAMDAGRTTVVSRADGRRGVPIHSRTNLMEAELLDADSDF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaagcgcctctgctccattgttggaggcttttggatgctttggatctgggca
gaaacctctataatcgctcaggcggtcatcttgcacccaaatgaaacgatattcaacgac
ttttgtaagaaatccacaacttgtgaagtattaaaatacaatacgtgccttggttcacct
ttgccgtacacgcacacatctttgattctggctgaagactcagaaactcaagaggaagcc
ttggagaaattggccatgtggtctgggttgagaaatgctcctcgctgttgggccgtcatt
caaccgttgctgtgtgccatttacatgccaaaatgtgaaaatggaaaggttgaactgccc
agccagcacctgtgccaagctacacgcaaaccttgcagtattgtggagcgggagaggggc
tggcccaacttcctcaagtgtgaaaacaaggagcagttccctaagggttgccagaatgag
gtccagaagatcaaattcaacacttcaggacagtgtgaggctcccttggtcaaaaccgac
atccaggcaagttggtacaaggacgtggaaggttgtgggatccagtgcaacaatcccctg
ttcacagaagacgagcactcggacatgcataactacattgccatcttcggctccatcact
ctcctatgtaccttctttacgctggccacatttctcgccgactggaagaattccaaccgt
taccccgctgtgatcctcttttacgtcaacgcatgtttctttatcggaagtattggatgg
ctcgctcagttcatggatggagcccgtaaggagattgtttgcaaaagcgacgacactatg
cggcttggagagccatcatccaccgagacactgtcgtgcgtgattatcttcgtcattgtg
tattattcgctaatgtctggagtcatttggtttgttatgctcacttatgcctggcacaca
tcattcaaagccctgggcaccacccaccagcctctgtatggaaaaacgtcctattttcac
ctggtcacatggtctattcctttcattctgacagttgctatactggccattgcagaggtg
gatggagattcggttagcggcatttgctttgttggctataagaactacagattccgtgca
gggtttgttctggctcctatcggggtggtccttgttgttggcggttatttcctaatacga
ggggttatgacattgttttccattaaaagtaaccatccagggctgctcagtgaaaaagct
gctagtaaaatcaatgaaaccatgctgaggcttggcatatttggattcttggcctttggt
tttgttttcatcactttcggctgccatttctatgactttttcaaccaagctgagtgggaa
aaaagcttcagggaatatgtactctgtgaggcgaatgtcaccatagctcaccagaccaac
aagccaatcccagagtgtgccatcaagaacaggcctagtctgctggtggagaagatcaac
ctcttttcaatgttcggcacaggcattgcaatgagcacatgggtttggacgaaggccacc
atccttatttggaaacgcacctggttcagaatcattggccgaagtgatgatgagccgaaa
cgtattaagaagagtaaaatgattgccaaggcattctcaaagcgaaaagaactgcagaag
gatccagaaaaagagctgtccttcagcatgcacaccgtttctcatgagggacctgtggcg
ggtatcaactttgacctgaatgagccatcaatggaaatgtcttctgcatgggcccaacat
gtgaccaagatggtggctagaagaggggcaattttaccacaagatatctcagtgacgccc
accggaacacctgttccgcctccagaggaaaggaacaaactttggatggttgaagcagaa
atttctcctgaaatgatgaaaagaaaaaagaagaagaaaaagagaaggaaggaaatacgg
ccaactggtcctgcagcggacgaagggaatcctgcctaccaccggagggagtttggcccc
agctcagtcccccgtctcccaaaacttccaggtcaccggagtctggtggctaacctttgg
gagcagcagcgacagcagcaggaggaacaggatatgctacctggagccttcccagaattc
aggcctntgtgtcctcttccttatcaggagaggtatggtgggctgggatacttacacaat
aaaccctccagcctcccccttgccaatcccctgactctacgagatagcatgcaagatgat
ttgggtggcttccagcaatcatcatggcagcctaatggggttttccggtaccttgggcag
gaggcttccgcgatggatgctggcaggactactgttgtgtcacgggccgatggcaggagg
ggtgtaccaatacactccagaaccaatcttatggaggctgagctattggatgctgactca
gatttttaa
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