Onychostoma macrolepis: 131539079
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Entry
131539079 CDS
T09350
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131539079 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131539079 (apex1)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131539079 (apex1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131539079 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
131539079
NCBI-ProteinID:
XP_058629377
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All DBs
Position
04:31727759..31730730
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AA seq
341 aa
AA seq
DB search
MHFVLSSSRILCVRVCAVSFLRVCGLKTTVSMPKRAKKNEEAVDGETGNGAEPAKKEKKG
KEPEAPILYEDPQDKMTSKDGRASNMKITSWNVDGLRAWVKKKGLDWVRKEDPDVLCLQE
TKCAEKALPSEITDMPEYPHKFWAGSEDKEGYSGVAMLCKNEPLNVTYGIGKEEHDKEGR
VITAEFPSFFLVTAYVPNASRGLVRLDYRKTWDVDFQAYLSGLDQRKPLVLCGDLNVAHQ
EIDLKNPKGNRKNAGFTPEEREGFTKLLEAGFTDSFRELYPEQANAYTFWTYMMNSRAKN
VGWRLDYFLLSSALLPGLCDSKIRNTAMGSDHCPITLYLAV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgttttaagcagttcacgcattttatgtgttcgtgtgtgtgctgtcagtttc
ttacgtgtgtgtggtcttaaaacaactgtaagcatgcctaaaagagccaagaagaatgag
gaagctgtcgatggggagactggcaatggagctgaacctgcaaagaaagagaaaaagggg
aaagagccagaggccccgattctgtatgaagatccacaagataagatgaccagtaaggac
ggtcgtgcatccaacatgaagatcacctcctggaatgtggacggtctgcgtgcatgggtc
aaaaagaaaggccttgattgggtgcgtaaggaggatccagatgtgctgtgtctgcaggag
actaagtgcgctgagaaagccctgccgtctgagatcactgacatgcccgagtatccacac
aagttctgggctggatcggaggacaaggagggttacagcggagtcgccatgctctgcaaa
aatgaaccgctcaatgtcacctatggtattggtaaagaggaacatgataaagaaggtcgg
gttatcactgctgagtttccatctttcttcctggtcacggcatatgtgcctaatgccagc
cgtggtttggtgcgacttgactaccgtaagacctgggatgtggatttccaggcctacctg
agtggcttggaccagcgcaaacccctggtgctgtgtggagatctgaatgtggcccaccaa
gagattgatctcaaaaaccccaagggtaaccgcaagaacgcaggcttcacccctgaggaa
cgtgagggcttcaccaagcttctggaggccggatttaccgacagttttcgggagctgtat
ccggaacaagccaatgcctacaccttctggacctacatgatgaactctcgagccaaaaac
gtcggctggcgtttggactactttttgctgtcgtccgccttgctcccaggtctgtgtgac
agcaagatccgaaacacagccatgggaagtgaccactgtcctattaccttgtatttggca
gtgtag
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