Onychostoma macrolepis: 131539269
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Entry
131539269 CDS
T09350
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131539269 (sox5)
Transcription factors [BR:
omc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131539269 (sox5)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Fz
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
131539269
NCBI-ProteinID:
XP_058629697
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All DBs
Position
04:24036263..24279527
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AA seq
951 aa
AA seq
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MCGIVLTRLEEGWQKPHIQPFWNLSTHPGCSSLHYAAQYDLHSTQWKQLLSTDCQRSLQI
FGCRTVVVTCSLTKSKSGDYIGFDGTVFSSILRLWDWAALVENTRSRGTDVTMRSYLEQC
DRPRGCLAATPPPSNPRDRRDAASIEGLRQGGRRSQQVEADTRTKLFHHKQPRLTDCSAQ
SRHTFKLSTGGMKTGETEDRMSSKRPASPYGGTDGEVVMATSRQRLEDEEVDGHAVIHLP
LSSYCSKVSPRSPRLLDSPPTLHANMDQDGSKGLALSPYPQHNSSTSPSKQQQQQEEGSM
RPGSEPSSASALGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKDKL
LAMGSGNFGEIKGTPDSLAEKERQLMGMITQLSSLREQLLAAHEEQKKLAASQIEKQRQQ
MELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQ
QGFLLPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGA
KHSTVPQANLATGTLSPTSGQSEKNRSTPPPKPKDEGAQPLNLSSKPKASESKSPTSPAS
PQVPALKLGPGSLKHSAPSSIGGPPSRLSSIDLLSSITSGGYLNDHEAVTKAFQEARQMK
EQLKREQQVLDAKVAAVNSLSLNNGRSEKDKAALESLSQQLKQSEESKFTHAMMDFGISG
DSDGSPSVSDSRIFREARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI
LGSRWKGMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIM
RNRRQEMRQYFTVGQQAQLPLSSAGVVYPGALSMAGMPSPQMPSEHSSMSSSPEPVPPTS
QPSYLTHKGEKPRVKEEDLRMDDGNGDAYDDFDYEDDDGDYGSDSENHITQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgggatagttctcactcgtcttgaggaaggctggcagaagccgcacatccagcct
ttttggaacctgtccacacacccaggctgttcttccctgcattacgctgcacagtatgat
ctacactctacgcagtggaaacagctcttgtctacagactgccaaaggagcttgcagata
ttcgggtgcagaacagttgttgtcacatgctcattgacaaaatctaaatcaggagactac
attggtttcgatgggactgtattcagctctatattaaggctgtgggactgggccgctttg
gtggaaaacacgcgttcccgagggaccgacgttaccatgagatcctacctggaacaatgt
gatcggccacggggctgcctggctgccactccgcccccgtccaaccctagggaccgaaga
gacgcagcctctatagagggactcagacagggtgggaggagatcccagcaggtagaagca
gacacaaggacaaaactctttcaccacaagcagcctcgactgactgactgttcagcgcaa
tcccgtcacacattcaaactctctacaggaggaatgaagacaggtgaaactgaagacagg
atgtcttccaagcgaccagcctctccatatgggggaacagatggagaggtagtcatggcg
acgagcagacagcgattggaggatgaagaggttgacggacatgctgtcattcacttgccc
ctgagttcgtactgcagcaaagtgtccccgcgatctccacggctgctcgacagcccccca
acactacacgcgaatatggatcaggatggcagtaaaggcctggccctgagcccctacccc
cagcacaactcgtctacctcacccagcaagcagcagcagcagcaggaggaggggtccatg
cggccggggagcgaacccagctccgcttcagctctgggcaccccggagagacgcaagggc
agtctggccgacgtggtcgacacgctcaaacagcgcaagatggaggaactcatcaagaac
gagccagaggaggcccccagtattgagaggctgttgtctaaggactggaaggacaagcta
ttggctatgggttctggcaactttggagagatcaaaggcaccccggacagcctggcggag
aaagagcgccagctgatggggatgatcacgcagctcagcagtctcagagagcagctactg
gccgcccatgaggagcagaagaaactggctgcttcgcagatcgaaaaacagcgccagcaa
atggagttagcgaaacagcaacaggaccagattgcacgacaacagcagcaacttctgcag
caacaacacaaaatcaacctcctgcagcaacagatccagcaggttcaaggtcagttgcct
ccactgatgatacccgtgttccctccagatcagagaactctggcggccgctgcagcacaa
caaggatttctacttcctccagggttcaactacaaaccaggctgcagtgacccttaccct
ttacagctaatccctacgactatggcagcggctgctgcggcgacgcctggcctcggccct
cttcaactgcagcagttgtatgcagctcagctagctgccatgcaggtgtctccgggggcc
aaacacagcacagtgcctcaggccaacctggcaaccggaacactctcgcccaccagcggc
cagagcgagaaaaacagaagcaccccaccaccaaagcccaaggacgagggcgctcagccc
ttgaatctgtcgtccaagcctaaggcatccgagagcaagtcacccacctcccccgcttcc
ccacaggtccctgccctgaagctgggccccgggtccctgaagcacagcgccccctccagc
atcggaggaccgccgtccagactcagctccatagacctgctgtcatccatcacctccggc
ggctacctgaacgaccatgaggcagtgaccaaagctttccaggaggcccgacagatgaag
gagcagctaaagagagaacagcaggttctggacgccaaagtagcggcagtcaacagcctg
agcctcaacaacggtcgctcagagaaggataaagccgctcttgaaagcctgagccaacag
ttaaaacagtctgaagagagcaagttcactcacgcaatgatggactttggcatcagtggc
gattcagatggaagcccgagtgtgtcagactcacggatcttcagggaggctcgaggacgt
ggcagcagcgaaccacacatcaagcggcccatgaacgcctttatggtctgggctaaagac
gagaggaggaagatccttcaggccttccctgacatgcataactcaaacatcagcaagatt
ctcggttctcgttggaagggcatgaccaacctggaaaagcagccatactatgaagaacag
gcccgtcttagtaagcagcacctagaaaaatacccagactacaaatacaaaccacggccc
aagcgcacctgcctagtggatggaaaaaaattgcgcattggtgaatataaggccatcatg
cgcaaccgcagacaggaaatgcgccagtacttcaccgtagggcagcaggcccagttgccc
ttgtcctcagcgggcgttgtgtacccaggcgcgctctctatggcaggaatgccctctcca
cagatgccctccgagcactcaagcatgtctagtagccctgaaccagtcccacccaccagc
cagccctcttacctcacacacaagggggagaagcctcgcgttaaggaggaggacctccga
atggacgacggcaacggtgacgcctacgatgacttcgactacgaagacgatgacggggac
tatggcagcgacagcgagaatcacatcactcagtaa
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