Onychostoma macrolepis: 131539670
Help
Entry
131539670 CDS
T09350
Symbol
cntn1b
Name
(RefSeq) LOW QUALITY PROTEIN: contactin 1b
KO
K06759
contactin 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131539670 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131539670 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omc00537
]
131539670 (cntn1b)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
Contactins
131539670 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omc00537
]
Others
131539670 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
131539670
NCBI-ProteinID:
XP_058630338
LinkDB
All DBs
Position
04:complement(26421009..26434378)
Genome browser
AA seq
1029 aa
AA seq
DB search
MVTPAMLLCVLSCFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHAGKYXCVAKN
VYGTVISKEATVKFGYLNQFPTDEREPVNVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGSIYASAELRVVSCAPTFIYN
PVKKVLLGAENGRVVIECTPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNASKSD
EGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDTEAVVGDTTILQCSASFDPSLDITF
IWTVDSYVINFYTDFEHYELLMGHENSGDLLIKNIQVRHAGRYSCTAQTIVDNATAEADV
SVKGLPGPPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTS
PVFLDGSMESATVDDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIG
QVGISGELIVTWTPVKPQFFFGKKFGYVVAFKPHEDYEWKWSTVEDPETRRYVYKESMTP
DTEIQVKVSTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTSTEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAASRVIVHRTINQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRLLRVYKYVSFSRKWLYLYWDHIYNYWNESYVEGYKVLFRKEGERY
GKLYTTGRHYIDFPMPETGDYIIEVRARCEGGDGPISQIRVQGKASLGPESLSVATVLLL
ALGWMNLGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccccagccatgcttctgtgtgtgctctcttgcttcttcttattggctgctgca
attaaacccaggatatttgaacccagaatttttgacaaggaggccacaggctttgggccc
atatttgaggaggagcccttggacacagtgtatgcggaggattcacctgagaacaaaatc
tccatgaactgcagggcacgggccaatcctccagccattatcaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgagcacttcagcctggttggaggaaacctg
gtcatcaccaacccagacaagggcaagcatgctgggaaatatnngtgtgtggctaagaac
gtgtatggcactgtcatcagcaaagaggccaccgtcaaatttggatacctcaaccagttc
cctacagatgagagagagccagtgaatgttaaggaaggacagggagcggtactgctgtgt
tctcctccctctcgctatccaagtgaggtgttgttccgctggatctacaacgacttcccc
aacttcatcatcccagaccagaggcgtttcgtgtctcagaccactgggaatatgtacatc
gctaaagtcgaggcatctgatgttgggaattattcttgctttgtgtcaagccccaccatc
ggcaagagcgttttcagcatgccgattcctctgattccacaaatagagaaggaggtgaag
cggtatcctgctgatatccgtgtgaaattccccaagacttatgctttggtgcatcagaac
atcactctggagtgctttgcccttggaaatccgctcccacacatccgctggaggaagtta
gatgctgatctcccgcccaactatgaggtcagcatgaatggagctttactgcatctgatt
aacgttcagtatgaggatgaagggagctacgagtgtgagacgctcaacgttaaagggatg
gactggtatcgacagtggctctatgtggaaggtgctccggagtgggctgagcacatcaat
gacacggagaaagatgttggaagtgaactaactctcagatgtgttgctgtggggaagcct
ttaccatggatacgctggctgaaggacggctattcttacggcaaaggggagctgaagttc
tccagtctcacgtttgaggattcggggatgtatcagtgtattgccgagaacgaatggggg
agcatctatgccagcgccgagcttcgtgtcgtctcctgtgcaccaacattcatttacaat
ccagtgaagaaggttctgctcggggctgaaaacggacgtgtggttatagagtgcacacca
cgtgctgctcctaaacccaagttcatctggaaacgaggctcagagctgctgaccaactct
tcaaggatgttaatttgggatgatggaagtctggagattctgaacgcttcaaaaagtgat
gagggctcgtacacatgctatgctgagaatgaccgcggcaaatccaacagcacagggacc
ctcactatcaccgaggccaccaaaatcaccgtggctccatcagacacggaagcggttgta
ggtgacactacgattctccagtgctctgcatcatttgaccccagcctagacatcaccttc
atctggactgttgactcctacgtcatcaacttctacacagacttcgaacactacgagctg
ctcatgggtcatgagaacagtggagacctgctgatcaagaacattcaggtgaggcacgca
ggacgctattcctgcacagctcagactatagtggacaacgccaccgcagaagctgatgtt
tctgtcaaaggtttgcctggtcctccaggtggcgtccgtgtggaagagatcggagacacg
tcagtaaaactacgatggagtctgggatcagaccatggtagttctcttattcaacatgtt
gtacaaactcgagacttttatgccctggatcccgaggactggaaaaccgcatccacctct
cctgtgtttttggatggatctatggagtcagccactgtagatgacctttacccctggatg
caatatgaattccgtgtgcatgccatcaatgaatttggagctggggaaaacagccgtcca
tccatcaaaatcaagacatgggatgccaggcctacagtagctccttctgacgtcattggg
caagtgggaataagcggagagctcatcgtgacctggactcctgtaaagcctcagttcttc
tttggtaaaaaatttggctatgtcgtggcgttcaagccgcatgaggattatgaatggaaa
tggtcgaccgtggaggatcctgagactagacgctacgtctacaaagagagcatgacccca
gacactgagatacaggtcaaagtgagcacctacaataacaaaggagaaggaccctcaagt
cttatatcggtggtctactcaccaaggctagcgccgactgaagctccattagacgtctac
gcccgccaggtcacctctacagaagctttggtctggtggttaccggtctaccaggcgccg
ccaaactgggtcgacggataccagattcgttactggaggaagtacgatgataatgaggct
gctgcctctcgagttattgtgcacagaacaattaaccaaacacgtctggagaacatgcgg
cctgactctcactacctcatagaggtacgagcgttcaacggagctgggctcggaccaccc
agcgagcactgtgaaatgttcaccaggagaccacccccaagtcgcctattgagagtctac
aaatatgtcagcttcagtcgcaaatggctctatctgtattgggatcacatctataactac
tggaatgagtcctatgttgagggatacaaggttttgttccggaaggaaggagagcgttat
gggaagctttacaccacaggcaggcactacattgactttcccatgccagagacgggcgat
tacatcatagaggtccgagcccgctgtgagggaggtgatggacccatatcacagatcaga
gtacaaggtaaagcctctctgggcccggagtctctcagcgtcgccactgtcttgctgctg
gcactgggctggatgaatttaggcctgtag
DBGET
integrated database retrieval system
