Onychostoma macrolepis: 131540371
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Entry
131540371 CDS
T09350
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131540371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131540371
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131540371
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131540371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
ECSCR
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
131540371
NCBI-ProteinID:
XP_058631076
LinkDB
All DBs
Position
05:42634414..42765625
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AA seq
852 aa
AA seq
DB search
MRVPVQHLAGLWPWLLMAASQVALGHTGLELAAAVESERSAPRATIKVSLLKQEPTSKPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDDRQETIFISIVKLESPESKVPQCQPLLD
KARLALQRGAQAVIFDITDDPGAAQELRDSGSLPRPVVLVKSSDAEELMGLVNKNEEAMV
FIDIMMETQKWPHYDVGILLTVALVVLAIIMIFALRFRCRSNRTWDSVHQQTMRAISRLE
TRTYSSQGCSGSQRSRGAPGSNSSSNSSPICAICLEEFMDGQELRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQPQGSDLASRQPQRSRMPPPPPEHSQAFLLPHHYSNQHPYPQ
HHVPFSLRHHYSRNTSGPLPQLGHYGNSPPLHPRTLRCFPSRPLGASCVYHLAPDAHHGH
PHRTGGHGCRTGGHHYAAPRRSCHRCPGGPLRNASGSRMHHVASSANHATHHHLPRGGGS
HSRQDDGSCSGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWST
FRSSLSSDYDPFVYCGPGKAPRRGSMEATQRPRSLDSVVNRTGGGSGGDAGAISPEEQQQ
QVAVFSHVHYHRHRHHYYEDGELSKGPGRGSDEDQGATSSAAAASGPCLVTKDKDSSGCQ
VQHQSCHCPITDLSSRRVEDRDPDPVSSSGASVILPSPPLTSPSPPCCHKGPGWTTGRKA
AGCPLEVPSPVVHFHQNLDLQDDCSIHIHYGQGAGSYCCTPPPDMAPTLLPVPLILDSTG
MTDWPCCSGAHVVWQKQVQQAHSEPQLLGPTSGMERPLCRAHHGPGDELPMDICLYCQTL
HNSQGSEEESGV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcagcatttggccgggctctggccgtggctgctcatggctgcctcg
caggtggcgttgggccacacgggcctggaactagccgctgccgtggagtccgaacgctcc
gcacccagagccacgatcaaggtgtcgctgctgaagcaggagcccaccagcaagcccatc
accctagaaggggtgttcgccgggggcagcgcaggctatgctgaagggaaactgatgcag
tctcacccgctgtctctgtgtaacaccagtgaagatgaccgtcaggagaccatcttcatc
agcatcgtcaaactcgagagtccagagagcaaagtgccgcagtgccagccgctgctggat
aaagctcgtctggctcttcagagaggtgctcaggcggtcatctttgacatcacagatgat
cccggtgctgctcaggagctgcgtgattcaggttcgttgcctcgtccagtggtgctggtg
aagtcatcagatgcagaagaactgatgggactcgttaataaaaacgaagaagccatggtg
ttcatagacatcatgatggagacgcaaaaatggcctcactatgatgttggcatcctgttg
actgtggctctggttgtgttggccatcatcatgatctttgctctacgcttccgctgcagg
tccaacagaacctgggactctgtgcaccagcagaccatgcgtgccatcagcaggttggaa
acacgcacatacagctctcagggttgctctggctcccagcgttctcgtggggctccaggg
tcaaacagcagctccaattccagcccaatctgtgccatctgtcttgaggaattcatggat
ggccaggaattgagaatcatctcctgtgctcatgagttccataaggagtgtgtcgacccc
tggcttctacaacaccgtacctgcccactgtgcatgcacaacatcatgggtaaacagcct
cagggttcagatctggcatcgcgtcagccccaaagaagtcgaatgccaccccctccacct
gagcacagtcaagccttcctccttccccatcactattcgaaccaacacccttatccccag
caccatgttcccttttccctgcggcatcattactcccgtaacacctctggacctttaccc
caattgggccactatggaaactctccccctcttcatccacgtactctccgttgctttccc
agcagaccgttgggtgctagctgtgtgtaccacttggctccggatgcccatcacggacat
ccgcacaggacaggcgggcatgggtgtcgcacgggggggcatcactatgcggcccccaga
aggtcgtgtcaccggtgtcccggaggacctttgcggaacgcttcgggttctcggatgcat
catgtggcatcgtccgcaaaccatgcaactcatcatcacctgccacgtggaggaggctcg
cacagtcgccaggatgacggcagctgctcgggagggagttaccatacggagcgtagcggt
taccttgcagacggaccggccagcgattccagctcaggatcgtgccatggctcgtccagt
gactctgtattgaactgtacggacatcagcctgcagggtgtctatggcagctggtccact
tttcgtagctctctcagcagcgattacgatccgtttgtctactgcggaccaggcaaagct
ccacgcagagggagcatggaggccacgcaaaggcctcgttccctggactcggtagtgaac
cgaactgggggtggaagcggcggtgatgccggtgccatttccccggaagaacagcagcaa
caagtggctgtgttcagtcacgttcactatcacaggcatagacaccactattacgaggac
ggggaactcagtaaaggacccggccgaggctctgacgaggatcaaggggccacatcctca
gccgcggcagcaagcgggccttgtctcgtaactaaagataaagactcctccgggtgtcag
gtacagcaccagtcttgccactgccccataacagacctcagttcaaggagggttgaggat
agagacccggaccctgtttcctcctcaggtgcctctgtgatccttccctctcctccttta
acctctccctccccaccctgttgccacaaaggcccagggtggacgaccggtcggaaagca
gctggctgtccattggaagtgccttcgccggttgttcacttccatcaaaacctggacctt
caggatgattgtagcattcatatccactacggacagggagcaggaagctactgctgcaca
cctccgccagacatggcccccacgttactgccagtgcccctgatcttggactcgacaggt
atgaccgactggccgtgctgtagtggggcacatgtggtgtggcagaagcaggtgcagcag
gcccattcagagcctcagctcctgggacccacttctggaatggagagacccctgtgtagg
gcccatcatggcccaggggatgaacttcccatggacatctgtctgtactgccaaactcta
cacaatagtcaggggtcagaggaagagtctggtgtttga
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