Onychostoma macrolepis: 131540451
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Entry
131540451 CDS
T09350
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
omc
Onychostoma macrolepis
Pathway
omc04270
Vascular smooth muscle contraction
omc04625
C-type lectin receptor signaling pathway
omc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
131540451 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
131540451 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
131540451 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131540451 (arhgef12b)
Membrane trafficking [BR:
omc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
131540451 (arhgef12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
APAF1_C
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
131540451
NCBI-ProteinID:
XP_058631246
LinkDB
All DBs
Position
05:27006688..27079458
Genome browser
AA seq
1426 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKSSVPPSHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPIGPDRLSSSPSPSERKPTPL
SVWAMTEEHSRNPTPKLLKEIQDAKKHIPQHQEQLSKPSGTGQDGSLSPRPGEGEQEDGR
GDLDRPPSWQGDAGMEPPWTNNTTAPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSP
DAEDTPDLDSQSSVSPSTRPVAHIIGAEDEDFDTEQEQMNGQCSCFQSIDLLKSRPAHLA
AFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFFIEKTASLKVTVPESIIADL
ERTAHSINAERKRPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAELV
RLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVKV
KESRGLEHKPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFPSVFPQRRPSRIDTSAITRAL
EPRQRPTKPQLPLGAGEQADGSSPPVRSSHSSEGSDGTTALVTSPPYSAPAAQGTDCISR
ESETGGLPSSAIPRLGDGVVPGDPQDSSSSNTHFDFSPCTLEHLQEEEPETDKTQDTGTP
RPDRSRMEPLGSGEVQSEDDQCAEAELEPPNWQTLVSRDVLSTLTAQEIKRQEVINELFY
TERAHVRMMKVLENLFYQPLIREAILPPADIKNIFSNLEEIVHLHMSLTEQMTAVRKKNE
TALIDSIGDDLLSWFSGEEEAKIKGAAGTYCSNQPFALELIKSKQKKDQRFNSFIQEAES
NRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDAEERSKVKQAGECCRKILTHVNQE
VKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHEGPLSWKVNKDKTIE
LYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRSF
FVLSMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDGEREAVELI
NSGVQKLNKDSEPISLVSIQSPEKDGTEVMPTPPCSTNPFETKSDEEEEEEEENSLQDQA
EVEALTLADMTDRLTFLKQGSRQGIAIDEADAFELQPLRADEALRTLATLRQLLINHMSS
QEDTDKEQQEDVARTGSQQGVVDSTAIGSAVENGSERAENRGENAQELPSGDTGFFETSE
DCVSAGSYMVLEVYGGSGESSTDDDVHGSSGEPVAGGDSGIDLKKLLSSSSQSSGGPNLN
RQIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETATDTEENKDKS
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaagtcgtcagtc
cccccctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagaatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgta
aaagaggatggagctgccatgcgagctggtgttcagacaggtgaccggattataaaggtc
aatgggacattagttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggc
tcctatgtggccctaacagttctggggagaccgccgggcctgcctcagatccccctctca
gacggcgagggggaggaggggcctctcttctctctcacctcccctcactccccggggccc
atcggaccagaccgcttgtcttcctcccccagcccctcggagcgcaaaccgacccctctg
tctgtatgggccatgacggaggagcacagcagaaaccctacacctaaactactgaaggaa
atccaggacgccaagaagcacattccacagcaccaggagcagctcagcaagccctctggg
actggacaggatggctccttatctccaaggccaggagaaggagagcaggaggatggaagg
ggagatttggatcggcccccttcatggcaaggcgatgctggaatggagccaccgtggacc
aacaataccacagcccctgtcactcccagtcctgtcccagagagtccatgccaaagagag
accccctgccacagcccaaagaccacaccccgagacagcctcaattcctgtccttcaccg
gatgccgaagacacacctgaccttgattctcagtcgagtgtgagcccctccactcgtccg
gtagcacacatcattggtgctgaggacgaagactttgacacagagcaggaacagatgaat
ggccagtgtagctgttttcagagcatagacctcctgaaatctcggcctgctcacctggca
gctttcatccatcatgtggtctctcagtttgaccctgcgccgctgctgtgctacctctat
gctgaactttacaaacagaccagctccaaagagacacgacgaatcctcatggataccttc
ttcatagaaaaaactgctagcttgaaagtaactgtgcccgaatccatcatcgctgacctg
gaacggactgcacactcaattaatgcagaacggaagaggccggagcccatctcagaggac
gtccaccgacaatatgtgcagcagctgcaggacacactactacctgacatccagaaaaac
ctagaagacttcaggcacaagcgcagtatgggtctgaccctagctgaagcagagctagtc
cgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgtgca
gagcacatcatctctaagatagaggatgtactattgacgtcacaggccacagaggaagat
aagtgtagcaccatgcagtttgtgatactctcgtatatgaagcagctcggcgtaaaagtg
aaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagataaag
aaaagtataaagcctgagaaagatggaagtgaagagaaatcaaagaaaacacgatttcct
agtgtttttcctcagagacggccgagcaggattgacacttcagcaatcaccagggccctg
gagccgaggcagcgtccgacaaagcctcagctgccgttgggcgctggagagcaggcagac
ggctcgtctcctcccgtacggagcagtcattcgagtgaaggctcagatggcaccactgcc
ctggtcacgtcacccccttacagcgctccagcagcacagggcacagactgcatcagccga
gagtctgagactggtggacttccctcttctgcaatacccagactgggagacggtgtcgtc
ccgggagatccgcaggactcgtcgtcttcaaacactcactttgacttcagcccctgtaca
ctggagcatctacaggaggaggaacctgagacagacaagacgcaggacaccggcaccccc
aggcctgacaggagcaggatggagccgctgggctctggagaggtgcagagtgaagatgat
cagtgtgctgaggcagagctggagcctcctaactggcagacgctggtgagcagagacgtc
ctttccacacttacagctcaggaaatcaagagacaggaagtcatcaacgagttgttctac
acagagagagcacatgttcgaatgatgaaggttctggagaatttgttttaccagccgctg
atcagagaggccatccttcctcctgcagacatcaaaaacatcttcagcaaccttgaggag
atcgttcatctgcacatgtctttaacggaacaaatgactgcggttcggaagaaaaatgag
acggcgctcattgactcaataggagatgatctgctttcctggttcagtggagaagaggag
gcgaagatcaagggagctgcgggcacgtactgcagtaatcagcctttcgccctggaactc
atcaagagcaaacagaagaaagaccagcgcttcaactccttcatacaggaggcagagagt
aaccgacattgtcgcaggctgcagttaaaggacattattcctgtggagacacaaagactc
acaaagtatcccctcctgctggagaacatcgccaaatacacagaggatgctgaggagaga
agtaaagtgaaacaggctggcgaatgctgtcgaaagattctcactcacgtcaaccaggag
gtgaaggaagccgagaacaaacagaggttggaggactaccagagacgactggacctgtcc
tcactgaagcagagcgagaaccccatgatcgctgagttcaagaacctggacttgactaag
aggaagatggtgcatgagggaccgctgtcctggaaggtcaacaaagataaaactattgag
ctgtacacattgctgctggaggatatattggtgctacttcaaaggcaagatgagaagctg
atcttaaaatgccacagtaagaatctggcgggcaccgctgagaccaaacacatcttcagc
cccatcatcaaactcagcactgtgatggtgcgctctgtcgccaccgacaacaggtcgttc
tttgtgctctctatgtctgataatggagcccagatctatgaactaatggcccaaaccgta
tctgagcaaaagacgtggcagtgtctgatcacacaaagagccgattgcatgaaaaccaaa
ctacacaacatcattcctttacctcagactgacggggaacgtgaagcggtcgagctgata
aactctggtgttcagaaactaaacaaagactctgagcccatttctttagtgagcattcag
tctccagaaaaagatggcaccgaggtcatgccaaccccgccatgtagcaccaatccattt
gagaccaaatctgatgaggaggaggaagaagaagaagaaaactcactacaggatcaggct
gaagttgaagcgctcacgttggctgatatgaccgatcgtctgacattcctgaagcagggc
tcgaggcagggcatcgccatagacgaggccgatgccttcgagctccagcctctcagagct
gatgaagctctcagaacactggcaacactaaggcagctcctgatcaaccacatgtccagt
caggaggacacagacaaagagcaacaggaagatgtggcgaggacgggctctcaacagggg
gtggtggacagcactgcgatcgggtccgctgttgagaacggctcagaaagggccgagaac
agaggggagaacgcacaggaactgccctccggagacacaggcttctttgagacatctgag
gattgtgtctctgcaggcagttacatggtgctggaggtgtatggaggctcaggtgagagc
agcacagatgatgacgtgcatggcagcagcggggagccggtggctggtggagactcaggc
attgacttgaagaagctcctctcttcctcctctcagagcagtggaggaccaaacctcaac
agacagatcatgacacacatacgtctactacaggccaacctgcagcatctgaaggataca
gaaatcaagtataaccagctacgccaaaggctatcagaggaaacagctactgacacagag
gaaaacaaagataaaagttag
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integrated database retrieval system
