Onychostoma macrolepis: 131540472
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Entry
131540472 CDS
T09350
Symbol
pole
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03030
DNA replication
omc03410
Base excision repair
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131540472 (pole)
03410 Base excision repair
131540472 (pole)
03420 Nucleotide excision repair
131540472 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omc03032
]
131540472 (pole)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131540472 (pole)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131540472 (pole)
DNA replication proteins [BR:
omc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
131540472 (pole)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
131540472 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
131540472
NCBI-ProteinID:
XP_058631297
LinkDB
All DBs
Position
05:complement(38232995..38261133)
Genome browser
AA seq
2286 aa
AA seq
DB search
MVLQNSGRYKSDRGGGDQDNQQDDASALSAVKRLERSQFTDGMDERFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKIALPYKPYFYIATKKNCEREVISFLS
KKFQGKVAKLEVVPKEDLDLPNHLVGLRRNYIKLSFNTVDDLVKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTENENGTSKKMTEQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSAYSPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHVHETKPNIFV
TYNGDFFDWPFIETRAAQLGLSMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHVNIVFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVERTLRHAIEEEEKIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHELNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
TAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEASVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQML
PAGETPDMEDFGAPQRPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREILGPPPAI
GASREELLVWLRYHKKKWELQLRQRKERRKRRRLIDGESQPTGGGVIRGGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGAN
CKKVNRILPRSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHTQGHKALF
GLFIPSQRKASVFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHQFEVRAEND
VKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLTAGMTVLEEFPVVPVHVIDEISYN
VLDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSHGCYSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQXANTVASYDETALCSNTFRILKSMVV
GWVREITHYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVICGNFNRLILCTKKRHIDDAIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPA
NYGGVKGKLPSSLLYGEHGNEKKKKKDGEEEDGSEDEDEDEENQGEDEEQDGEDDVEDSI
ESNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMKQELRRNAPGATPIKRRGATQASQQ
STGDVSALPGLITFSQEYVSSELTQSFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLP
LNNPALEFIKCVCQVLSLDASIVNQVNKLKRDLLRLVDVGEFSEDAQFCDPCKSYILPEV
ICHHCNFCRDLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTL
QDLECSKCKGVKEANMPIYCRCAGDFNLTFTTKSFTEQVEVFRNIAAHYNMNFLLETIDW
VLSMNA
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggttttacagaacagtgggcgatataaatcagaccgaggtggtggcgatcaggacaac
cagcaggatgatgcatcagctttgtctgccgtcaagcggctggagcgcagtcagttcact
gatgggatggatgagcgctttggcttcgaacggatgaaagaacctggggagaaaacggga
tggctgatcaacatgcacccgactgagattctggatgatgacaagcggatgatcagtgct
gtggactattacttcatacaggaggatggaagcagattcaagattgctcttccctataag
ccgtatttctacatagccactaaaaagaactgtgaaagagaggttatctccttcctgtca
aagaagttccagggaaaagtggcaaagcttgaagttgtcccaaaggaagacttagatctg
cctaatcatctggtgggcctgaggaggaattacatcaaactctcttttaacacggtggac
gaccttgttaaagtgaaaagggagatctcacctgctgtccgcaagaacagagagagagag
aagtcaaatgatgcctataccagcatgttatccagtgctttggttggtgggagcgtagtg
acggagaatgagaatggcacttcaaagaaaatgactgagcagcttgacaacattgtagac
atgcgggaatatgatgtgccttatcatgtccgcgtttctattgacctgaagattcatgtg
gctcactggtacaatgtgcggtacagaggaagtgcctattctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgtagtgttggcgtttgatatcgagaccactaaa
ctcccactgaagtttcctgatgctgaaacagaccagattatgatgatatcatacatgata
gatgggcagggcttcctcatcacaaacagagaaatagtctctgaggacattgaggacttt
gagttcaccccaaaacctgaatatgagggtcccttcactgtgtttaatgaacccgatgag
gcctctcttattcagagatggtttgagcacgtccatgagaccaagccgaacatttttgtc
acttacaacggagatttctttgactggccatttatagaaaccagagcggcccagcttggc
ctgagtatgcatcgggagataggcttccagaaggacaatcagggggaatataaagccagc
caggctattcacatggactgccttaggtgggtaaagagagacagttacctgcctgtagga
agtcataacctcaaggctgcagcgaaagctaaattaagctatgaccctgtagagctggac
ccagaggagatgtgccgtatggctactgaagaaccacagactttggccacctactcagtg
tctgacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcactataattcctatggaacccgatgaggttttgcggaaaggctctggtaccctg
tgcgaggccttgctgatggttcaagccttccatgtcaacattgtcttcccaaacaagcag
gagcaggtctttaacaaactcacagatgatggtcatgtacttgactctgagacttatgtt
ggcggccacgtcgaggctctagagtctggtgtgtttcgcagtgatatcccctgtcgcttt
aaaatgaatccagcagcatttgacttcttgattcagagggtggagcgtactcttcgtcat
gcaattgaggaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgt
gatgaaatcaagaggaagctgatctctctgaaggaagtgcccaatagaatcgagtgtcct
cttatttaccatctggatgtgggggccatgtaccccaacatcatcctcaccaacagacta
cagccctctgccatggtggatgaggcgacctgtgctgcctgtgattttaataaacctggt
gcaaactgtcagcgcaggatgacttggcaatggagaggagagatcatgcccgcgagtaga
agtgagtttcatcgcattcagcaacaactggagtccgagaagttcccccctctctttcct
aatggtccacctcgtgctttccatgagctcaacagagaagaacaagctcggcatgagaag
aagcggttgggagactactgtagaaaagcctataagaaggttcacctgaccagactggag
gagagagtcactaccatttgccagagagagaactctttttatgttgacacggttcgagcc
ttcagagaccgtcgatatgagttcaaaggactccacaaggtgtggaagaagaagctgtct
acagcacaggataatggggacgcagcggaggtgaagcgctgcaagaacatggagattctc
tatgagtctctgcaactggcgcacaagtgcatcctcaactccttctatggatacgtcatg
agaaaaggagcacgctggtactcgatggagatggcagggattgtctgtttcaccggtgcc
aacattatcacacaggccagagaacttattgagcagatcgggaggcctctggagttggac
actgatggtatctggtgtgttcttcccaacacctttcctgagaactttgtcataaaatcc
accaatgagaagaaggcaaaggtgaccatcagttatccaggagccatgctgaatatcatg
gtcaaggagggcttcacgaatcatcagtatcaagagctggtggacccagcatctttaaca
tatgagaccagagctgagaacagtatcttctttgaagtcgatgggccgtacttggctatg
atcctgcctgcctctaaagaagaaggaaaaaagctaaagaagaggtatgccgtgtttaac
gaggatgggtcactggctgagctgaagggctttgaggtgaagagaagaggagaacttcaa
ctcattaagatcttccagtcatctgtgtttgaggccttcctgaaaggcacaactctagaa
gaggtttatgcctctgtggctaaagtggctgactactggcttgatgtgctctacagcaag
gctgctaacatgccagatgcagagttgtttgagctgatttcagaaaaccgctccatgtcc
cgtaaactggaagattatggagaacagaagtccacctccatcagcacagccaagcgtctt
gccgagttcctcggcgatcagatggtgaaggacgccggcctcagctgtcgctatgtcatc
tcccgcaaacctgagggctcgcctgtcactgaaagagcaatccctctggcaatttttcag
gctgaagcgagtgttaaaaaacatttcctacgcaaatggctgaagatgcccagcctccac
gaccttgatattagatctattctggactggggttactacattgagcggttgggcagtgcc
atacagaagatcatcactatccctgcagcattgcaacaggtgaaaaatccagtaccccga
gtaaggcatccagactggctgcataagaagcttctggaaaagaatgacatctacaagcag
aagaagatcagtgagctctttaccagtgagggaaagagacaggtggcccatcaaatgtta
ccagcaggcgagactcctgatatggaggactttggtgctcctcaacgccctgtgcagccc
gccatactcatcagcacaaagaggaagaggatatctcaaggagaggacagccaggctgag
tctcaagagcaagaactcacacagtcttggagagaaatactggggccaccaccagccatt
ggtgcctcccgggaagaacttcttgtctggttgcgctaccataagaaaaaatgggagttg
cagcttcgtcagaggaaagaacggcggaagcgacggcgtttgattgatggggaatctcag
ccgactggtggcggcgtaatccgtggtggaccgacaacagggctaggcagcttcctccga
agaactgctcgcagtattctagacatgccctggcaaattgtacagattgcagaaaccagt
cacccaggcttatataagctgtgggcggtcattggcagtgacctgcactgcatgaagctc
aacatcccacgagtgttttatgtcaatcagaaagtgcccaagcaagaagagggagctaat
tgcaaaaaggtgaaccggatacttccacgctctggtgtggtgtattatctgtaccaatat
gctgttcctgaggacatgtaccaggaacacatcaatgagattaatgctgacctctcagct
cctgatattgagggtgtctatgagacacaggttccactgctgttccgggctctggtccag
ttgggctgcatgtgtatggtaaataagcaggtggtcagagatctggctggcagagaggct
gatacctttgacctggagcatctagagatgagatccctggcccagttcagctacctcgag
ccaggcagtgtaaggcacatctacctgtaccatcacactcagggccataaggctctcttt
ggcctcttcataccatcccaacgcaaagccagcgtctttgttctcgacacggtacgcagt
aatcagatgccgaacctgagttcgttgtatggagcagagcgcacagcactcctggagaag
accacagaggagctgctgccacctgagaaacatcagtttgaagtgcgtgctgaaaacgac
gtcaaagccatctatcgcgcactgcaacgcattctcctcaactacaaggaggagcggcgt
ggtccgaccctgattgctgttcagtctaactgggagctgcggcggctgacggctggcatg
actgtactggaggagttcccggtggtcccggttcatgttattgatgagataagttacaat
gtactggactggcagcggcatggagctcgccgcatgataaaacactacctgaacctggac
agctgcctctcacaggcttttgatatggccaggtattatcacctgcctgtgggaaatctg
cctcaggacatttctatatttggatcagatctatttcttgcacgtcatctgagaaagcac
aaccacttgttgtggctgtcacctacggcacgtccagacctcgggggaaaagaggctgat
gacagcagactggtgatggagagtgatgagagaggctccatggagatcaatagccatggc
tgctactcaacagtttgtgtggagttggatattcagagtttggcggtgaacaccattcta
cagtcccagcacgttaatgacatggaaggcggggccagcatgggcgtcagctttgatgtc
attcagcatgcatctctggaggaaatgatgtcagggaatcagngggcaaacacagtggcc
agctatgacgagacggcgctctgctccaacacattcaggattctgaagagcatggttgtc
ggttgggtccgagagatcacgcactatcataacgtctacgctgataaccaggtgatgcat
ttttaccggtggttgcgatcacccagttctctgctgtacgacccggccctgcaccgcaca
ctcctcaacatgatgaagaagatcttcctgcaacttgtggcagagtttaagcgcctggga
tcatctgtgatctgtggaaacttcaaccgtctcatcctctgcaccaagaaacggcacatt
gatgacgccattgcatacgtggagtacatcactaacagtatccattcaaaggagatcttc
cactctctgtccatcacattctcacgctgttgggagtttctgctgtggatggatcctgct
aactatggaggagtgaagggaaagttgccctctagccttctgtatggagagcatggcaat
gaaaagaagaaaaagaaggatggagaggaggaggatggaagtgaagatgaggatgaagat
gaagaaaaccaaggggaggacgaagaacaggatggggaagatgacgtagaagactcgatt
gaaagtaactggaacatcatgcagtaccttcctcagacagcatcctgtcagaaatacttt
ctcatgatcatttcagcctacattgcagctgtctatcacagcatgaaacaagagcttcgg
cgaaacgcccctggtgctactcccattaagagacgaggagcgacccaagcttcccagcag
tcaactggggatgtcagtgcacttcctggtttgattacattctctcaggagtatgtgtca
agtgaactcacacagagcttcttcaccatcactcagaagattcagaagaaagtgtcaagc
actcgtagtgttacgctcccatctgagatgtttcctgttcttcctggttctcacttgccc
ctcaacaacccagctctggagtttattaaatgcgtctgccaggtgctctctctggacgcc
agcattgtcaatcaggtgaacaaactgaagcgagatcttttgcgattggtggatgttgga
gagttttcagaggacgcccagttctgtgacccctgcaagtcctacatcctgccagaggtc
atctgccaccactgtaacttctgtcgtgaccttgacctctgcaaagaccctgcagtttcc
caggatggttcagttcttcctcagtggttctgctctaactgtcaggcccagtacgacaca
gagtccatagaaatggccctggtggaggcgctccagaagaagctcatgagttacacatta
caagacctggaatgttccaaatgcaaaggagtgaaggaagcaaacatgccgatatactgt
cgctgtgctggagatttcaacctcaccttcaccacaaagagcttcactgagcaggtggaa
gtgttccggaacattgccgcccactataacatgaacttcctgctagagaccattgactgg
gtccttagtatgaacgcatag
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