Onychostoma macrolepis: 131540483
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Entry
131540483 CDS
T09350
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131540483 (zfr)
Spliceosome [BR:
omc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131540483 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
131540483
NCBI-ProteinID:
XP_058631381
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All DBs
Position
05:13403817..13421389
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AA seq
1078 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDVKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAAASAGAYGGYQPAHAATDYGYAQRQP
EVPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPAATPAVAAAAAQPQPTVAESY
YQTAPKTGYSQGATPYTQTQQTRQVTAIKPATPRPATSTFSIYPVSSAVQPVAAAAAASV
VPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAVAAAATAAWTGS
TFTKKTPLQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKLSQ
SSSSSSGGGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSVVSQSSTSSTAAPNKTASSNISSSTSASSNLSASSVSASYLKSGSMVNNMAASAAQG
KSPVPNSVSVNSTSVKKVNTPKINFVGGNKLQTTAVKNEEAKMEAAKTAQSAVSAPTSDL
KNEMSDPLSPQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMH
LKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMR
RYEEDMYWRRMEEEQHHWDERRRMPDGGYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRP
DSSDDRYVMTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDASAKGNEEDKEKK
EPPKDRVLKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKNLLTRIVEHLPKQLTMVTP
EKYEVKGSVQEAAIILTSSAEPKMQVTITLTSPVIREENTRDGDVTSSMVKDPADVLDRQ
KCLDALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISS
ASGPMSPGDALRRVFECISSGILLSGAPGLIDPCEKNPTDTLATMEEQQREDITSSAQFA
LRLLAFRQIHKVLGMDPLPQMNSRFNVRNNRKRRRDNSDGTDGFEAEGKKDKKDYEGF
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggctaggtgaagat
gtcaaaatggccaccggcaactactttggatttacccatggtgctgcggcccagtacagt
cagcagccggccgctggggtagcatacacccaccccactacagtggccagctatactgtg
catcaagcacctgtggcggcacacacggtggcagcagcctacgcccctacagctgccacg
gttgctgttgctaggcctgcaccagttgcagtagcagcagcagcagcttctgccggcgct
tatggaggataccagccagcccacgctgccacagattacgggtatgcgcagagacagccg
gaggtacccccaccaccgcctcctgttacctcacaaaactaccaggactcctattcctat
gtgcggtctacagctccggctgtagcgtatgacagtaaacagtactaccagcaacctgca
gctacaccggctgtggctgctgcagcagcccagccacaacccactgtggccgaatcctac
tatcagacagcccctaaaactggatacagccaaggtgccactccgtacacccagacccag
caaacgcgtcaggttacagccataaagccagccacccctagacctgccacctcaaccttc
tccatttacccagtgtcctctgctgtacagccggtcgcagctgcggcggctgcctctgta
gtcccatcatattctcagagtcccacctacagcaccaatgcagtcacatactctggaacc
tcatactctggctatgaagctgcagtgtattcagctgcctcctcctactatcaacagcag
caacaacagcagaaacaggcggccgtcgccgcagcagccactgctgcgtggacaggcagt
acttttacaaagaaaacacccttgcagaacaaaacactcaaacctaaacagccccctaaa
ccaccacagatacattactgtgatgtctgcaagatcagctgtgctggaccccagacctat
aaggagcatctggagggtcagaagcacaaaaagaaagaagccgcattgaagctgtcacag
agcagcagtagcagcagcggaggcgggagctccgcccgcggcacacagaatcagctacgc
tgtgagctctgtgacgtctcctgtactggagctgatgcctacgctgcgcacatcagagga
gccaaacaccagaaggttgtgaaattgcataccaaactaggaaagccaataccatccaca
gagcccagtgttgtttcccaatcctccacctccagtacagctgctcctaataaaactgcc
agctccaacatcagcagctccacaagcgcatcgtccaatctctctgcttcctcagtttct
gcctcttacttaaaatctggcagcatggtcaacaacatggcagcttcagctgcacagggc
aagagcccagtgcccaacagtgtctcggtcaacagcacctctgtcaagaaggtcaacaca
cccaagatcaactttgttggtggaaacaagttacagaccactgctgtcaaaaatgaagaa
gccaagatggaggcagctaaaactgcacagtccgctgtgtctgcgccaacatcggaccta
aagaatgaaatgtctgaccctctgtcacctcagtcagcacttgcagcactgcagagtgat
gttcagcccgtcggacacgactatgttgaagaggtaaggaatgatgaaggaaaggttatc
cggttccactgcaaactgtgtgaatgcagtttcaatgacccgaatgccaaagaaatgcat
ttgaaaggaaggagacatcgactgcagtataagaaaaaggtaaacccagatcttcaggtg
gaagtgaagcctagcatccgagccaggaagatccaagaggaaaagatgaggaagcagatg
caaaaggaagagtactggagaagacgtgaagaggaggagcgctggaggatggagatgagg
cgctatgaagaggacatgtattggcgacgtatggaggaagagcagcaccactgggacgaa
aggcgcagaatgcctgatggcggttatccacagggtccacctggacctcctggtcttctt
ggagtgaggcctgggatgcccattcctcaaccacaaggaccagtgcctccacgtcgccct
gattcctcagatgatcgttatgtgatgaccaaacatgcagctatttacccatctgaggat
gagctccaggccatccagaagatcgtatcaatcactgaacgagcacttaagcttgtctct
gacatcatcacagaccaagatgcaagtgcaaagggcaacgaagaggacaaagaaaagaaa
gagccccccaaagacagagtgctgaagggagtgatgcgggtgggcgttctcgccaaaggg
ctgcttctacgtggagataaaaatgtcaacctggtcctcctttgttctgagaagccgaca
aagaatctgctaacacgcattgtggaacatcttcccaaacagctcacgatggtaactccg
gagaaatatgaggtaaaaggctccgtccaagaggctgccattatccttacctcctccgct
gagcccaagatgcaggtgaccatcaccctcacctcgcccgtcatccgagaggaaaacacc
cgggatggagatgtaacctcgagtatggtgaaagacccagcggacgtcttggacaggcaa
aaatgccttgacgctctggctgccctacgccacgctaagtggttccaggctagggctaat
ggactccagtcatgtgtgattgtcattcgaatactgcgtgacctttgtcagcgagtaccc
acctggtctgcctttcctagctgggctatggagctgctggtggagaaggccatcagcagc
gcctctggaccaatgagccctggagatgctctgcgacgagtctttgaatgtatttcctca
ggcattctgctgtctggtgctccaggattgatagacccctgtgagaagaatccaacagat
acactggctaccatggaagagcagcagagagaggacattacgtcaagcgctcagtttgcc
ttgaggctgctggcgttccgtcagattcacaaggttttgggtatggaccccttgccccag
atgaactcccgcttcaacgtacggaacaaccgcaagagacgtcgtgacaacagcgacggg
acagatggatttgaagctgaagggaagaaagacaagaaggactacgaggggttctga
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