KEGG   Onychostoma macrolepis: 131540575
Entry
131540575         CDS       T09350                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
omc  Onychostoma macrolepis
Pathway
omc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131540575 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omc03019]
    131540575 (exosc2)
Messenger RNA biogenesis [BR:omc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     131540575 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     131540575 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 EXOSC1 ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 131540575
NCBI-ProteinID: XP_058631574
LinkDB
Position
05:complement(664312..671779)
AA seq 295 aa
MAAEMRLPAVHKHVSPALSRSNREDKHLVVPGDIITSDTGFMRGHGTYMDEDRLTASVAG
EVERVNKLICVKPLKTRYNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAQDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVLLSPSL
IKRQKTHFHNLPCGASIILGNNGFVWLYPTPAQLDEEAGGFYTSMEPVSLSDREVISRLR
NCLLALAAHKVLLYDTSVLYCYEASLVHQIKDILKPEIIEEIILETRQRLVEHEG
NT seq 888 nt   +upstreamnt  +downstreamnt
atggcggcggagatgaggctcccggcggtgcacaaacacgtttcaccggcattatctcgg
tctaaccgggaggacaaacatctggtggttcctggcgatatcatcacatctgacacgggc
ttcatgaggggtcatggcacatacatggatgaagacagactcacagcttcagtggctgga
gaagtggagcgggtcaacaagctcatctgcgtcaaacccctgaagaccaggtataacggt
gaggtcggagacgtggtcgtcggcagaatcacagaggtgcagcagaagcgatggaaagtg
gagacgaattcacgtctggattcagttctgctgctgtcttcagttaatctgcccggagga
gagctgagacggcggtcagcgcaggacgagctggccatgagagactatcttcaggaagga
gatctcatcagcgcagaggttcagtccatcttctcggacggcgctctctctctgcacacg
cgcagcttgaagtacggcaagctggggcagggtgtgctggtgctgctctcgccgtcgctc
atcaagagacagaagactcacttccacaatctgccgtgcggcgcctccatcattctggga
aacaacggcttcgtctggctttatcccacaccggctcagctggacgaggaggccggaggg
ttttacaccagcatggagcccgtgtctctgtccgatcgggaggtgatttccaggctcagg
aactgtttgttggctctcgcggctcataaggttttgctgtacgacacgagcgtgctttac
tgctacgaagcgtctcttgtgcaccagattaaagatatcctgaagccggagatcatagag
gagatcattctggagacacggcagcgtctagtggagcatgaaggataa

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