Onychostoma macrolepis: 131540628
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Entry
131540628 CDS
T09350
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
omc
Onychostoma macrolepis
Pathway
omc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131540628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131540628
03036 Chromosome and associated proteins [BR:
omc03036
]
131540628
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131540628
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131540628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
YafQ_toxin
Motif
Other DBs
NCBI-GeneID:
131540628
NCBI-ProteinID:
XP_058631667
LinkDB
All DBs
Position
05:complement(24519993..24545861)
Genome browser
AA seq
1755 aa
AA seq
DB search
MSAEVLRPGPVASGGSKLGELIGKLHEYMAAATEDKTEATLPGHWNGTTAKEYLEQQACA
QSSGPSEVGMLSSSRSRRKPAVVTKHSGMNESDASSESGAEDVMSVPSSDPDTNVLPKGT
VFVLPEPVGNETRDDFRGPEFRSRRVYKQHRDSGDRRRGGYEIERVNCTACGQQVNHFQR
DSVYRHPMLNVLICKNCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKKC
VLRNLGRKELSTILEEERKWYCYVCSPEPLVELVLACDAVLENLEQAQKRASRTEPNSVR
GRANKGGRGAAYLMGPGGGPVPSAGLYQRMQRFVDVTTSLSHSFQAVVQSEREQEGNKEE
RIGQLRMFRAVLDDLQSANSALQEALDHELTGSKRGCRETHKPKGRARKKKGLSSQSPGL
TKKLVVQLTPVPVSPQPISRTCLSIHPSPERQAINSEVTDGALEERETMVEMEKGMEMEE
ITEREDVENYCVVNDEEEEEEEDEEEEEEDQADPKNVSLSEENKRSPRVKTTPRRRRTNP
STTAEHAGSAEDDSDSDEVPEVLLQTAAAMANSEEEGLVGSSWDGDGDGDEVNQQVRKQC
LFGLVKTTPPDRGSRKRNLKERSSSSSSSSSTSSRRGSQDQGSASRMTRGRSRKVARVTG
QSGSSSSEVGGQELESGPSSDSDDQRIKPLTEDVTLLGSGNFQQSSGDEMDIQPGPSLSV
EDDDLENRIAKKILLAQIRANLSSASELDASSDEQSESTREELKKSKNIDRTSETTEEED
NDSDCSGSQSGPRHRHRLLRHGLTLSEPEAKSQKQEVKKPKKRESEGQDLECVVVSSDET
SVSSGVYDELSHSECEEIGSQSPTHNENCQSPPRTPDRSSTADNDASPTTEEHLRGTPRG
RRQIRPLLEVGQLAQETQSALKEEEERRRRLAEREKLRLENERREREDADPEVILVSEKP
AHSFTPLVLEQDDVTHKPVLQVHLHFLSKLKPHQQEGVRFMWDCCCESVQNVKTTPGSGC
ILAHCMGLGKTLQVIVFLHTVLLCKELPLKRALVVCPLNTVLNWRSEFDQWQRGLRPNIL
WVAELATVKSVGVRVELLNDWFMNGGVMIMGYEVFRVLTHTDSAKYSKHKEAFRSMLLDP
GPDLVVCDEGHVLRNAESSISKAIRALRTRRRIILTGTPLQNNLTEYHCMVNFIKENLLG
SLKEFRNRFINPIQNGQCADSTPADVRLMKNRSHVLHQLMSGFIQRRDYSVLMSCLPPKH
EYVLSVRMTNLQCRLYTHYLQNYTGKGAGVSSLFQDLHVLSLIWTHPWCLKLAQLSRNKG
KEEEPAPVFKGLGAGLASNSVNPNDSERRDATSTGLVGDGERNTDPVSLVSRANQNPQNP
DVTNTATGEISGGEAGFVVGNGPSANWYLPFVSAVDAKVLEHSGKLQLLLEILHWAEELE
DKVLVFSQSLISLDLIESFLLYADETKGKKCCPYKGEKAWVKNKDYYRLDGNTSACARKR
WAQEFNNTKNIRGRLFLISTRAGSLGINLVAANRVVVFDACWNPSYDIQSIFRVYRFGQK
KTVYVYRFLAQGTMEQNIYERQVAKQSLSSRVLDQQQIQRHFTHSQLNELYRFQPDLRPS
KHTETPVDDLLAQMLQSCGQLIVSYHEHNSLLDHREEEELSEEERRAAWDEYRAEKKASV
QNSNELIPRNANQALQQPLASQNFAYTTKGVPSTTSLHVKQGNAEPSVAWITYNSNIAFQ
LGNPKVVYLVPKQNT
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaagtgctcagacctgggccggtggccagtggaggcagtaagctaggtgag
ctgatcgggaagcttcatgagtacatggcagcagccacggaagacaagactgaagctact
ttacctggacactggaatggaaccacggccaaagaatacttggagcagcaggcttgcgcc
cagtccagtggcccctcagaagtgggaatgctgtcgtcatctcgttcgagaaggaaaccg
gctgttgttaccaaacacagcgggatgaacgagtcggacgcttcgtctgagagtggagca
gaagatgtaatgtctgtgccctccagcgacccagacaccaacgtactgccaaaaggaaca
gtgtttgtgctgccggagccggtgggtaatgaaactcgtgatgatttccgtggtccagaa
ttccgcagtagacgtgtttacaagcagcacagagacagtggtgacagacgcagaggagga
tatgagattgagagggtgaactgcacagcgtgtggtcagcaggtgaatcatttccaacgt
gactcagtctacaggcaccctatgctcaatgtcctcatctgcaagaattgttttaagtat
tatatgagcgatgacatcagtaaagattcagaggggatggacgagcaatgcaggtggtgt
gcagaaggaggcagcctgattggctgtgattactgcagtaatgccttctgtaagaaatgt
gttctgcgtaacctggggaggaaggagctgtccaccatcctggaggaggagagaaagtgg
tactgttatgtgtgcagtcccgagccattggtggagctggttttggcctgtgatgcggtt
ctagagaacctggagcaggctcagaagcgagcctcccgtactgagccaaactcggtccgg
ggcagggctaataagggtggtcgtggtgcggcctatctcatggggccaggaggcggccca
gtgccctctgcaggcctttaccagcgaatgcagcggtttgtagatgttaccacatctctg
agccattccttccaggcagttgttcaaagcgaaagagagcaggaaggaaacaaagaagag
agaattgggcagctaaggatgttccgcgctgtgctggatgatctgcaatccgccaacagt
gcattacaggaagccctggaccatgagctgactgggtccaaacgtggctgccgagaaaca
cataagccaaaagggagggccagaaaaaaaaaaggactgtcatcacagagcccaggactc
actaaaaagctggtggttcaactcactcctgtaccggtcagcccacaacccatcagcaga
acgtgtctttccattcatccatcacctgagagacaagcgataaacagtgaggtgacagat
ggagcactggaagaaagagagacaatggtggagatggagaaggggatggaaatggaggaa
attaccgagagagaagatgtggaaaattattgtgttgttaatgacgaggaagaggaggag
gaagaagatgaagaggaggaggaagaggaccaagctgaccccaaaaatgtgtctttatca
gaggagaataaacgttctccacgtgtgaaaaccacaccacgtcgtcggcggacgaacccg
agcaccacagctgagcatgccggttcagctgaggatgactctgattctgacgaggtgcct
gaagtgctgctccagactgccgctgccatggcaaacagcgaggaagagggtttggtaggt
agcagctgggacggggacggggatggggacgaggtaaaccagcaagtcagaaagcagtgt
ctctttggactggtaaaaacgacacctccggacagaggctctcgtaagcggaatctcaaa
gagaggtcctcatcgtcctcatcgtcctcctctacgtcttcaaggaggggctcccaggac
caggggtcagcgagcagaatgaccaggggaaggtctcgcaaagttgccagggtgacggga
cagagcgggagttcgtcaagtgaggtgggaggacaggaactggagagtgggccgagcagc
gactctgacgatcagcggatcaagccgctgacagaggatgtcacattgctgggctctgga
aatttccagcagtcttccggtgatgagatggacatccagccaggtccgtctttgtctgtg
gaggacgatgatttagaaaatagaattgcaaagaagattctgctggctcagatcagagct
aacctctcctcagcgtctgagctggacgccagctccgatgagcaatcagagagcacgaga
gaagagctgaagaagagcaagaacattgacagaacatcagagacaacagaagaggaagat
aatgactcggattgcagcgggtcgcagtcagggccacggcaccgtcaccgattactgcga
catggtcttaccttatcagagcctgaagcaaaaagtcaaaagcaagaggtgaagaagcct
aagaaaagagaaagcgaaggccaagatttagaatgtgttgttgtgagtagtgatgaaacg
agtgtatcgagcggcgtgtatgatgaactcagccattcagagtgtgaggaaattgggtcc
cagtcgcccactcataatgagaactgtcagagtccaccacgcacacctgacaggagcagc
actgctgataatgatgcctctccaaccactgaggagcatttaaggggcaccccgcgaggg
cggaggcagatcagaccgcttctggaggtgggtcagctggcccaggagacgcagagcgct
ctaaaagaagaggaggagcgcaggaggagattagcagagagagaaaaactgagattagaa
aatgagaggagagaacgagaagatgcagacccagaggtcatcttggtgtctgagaaacca
gctcatagtttcacaccattggttctcgagcaagatgatgtaacgcacaagcctgtgctg
caagtgcacttgcactttctgagcaaactcaaaccacaccagcaagagggtgtgcgcttc
atgtgggactgctgctgtgagtccgttcagaatgtgaagacgactccaggctctggctgt
attctggcccactgcatgggtctgggaaagaccttacaggtcattgtgttccttcacaca
gtgctgctatgtaaagagctgccactgaaaagggctctggtggtttgtcctctcaacaca
gtgctgaactggaggagtgagtttgaccagtggcagaggggcttaagacccaacatactg
tgggtggcagagctggccacggtgaagtctgtgggtgttcgtgttgagctcttgaatgac
tggtttatgaatggtggtgtgatgatcatgggatatgaggtttttcgtgtactgacacac
acagatagcgcaaagtacagcaaacacaaagaagccttccgctcaatgctcctggatcca
ggccctgatctggtggtgtgtgacgagggtcatgtccttaggaacgcagagtccagcatc
tcaaaagccatacgagctctacgcacacgtaggagaatcatattgacaggaacaccactt
caaaacaaccttactgagtatcactgcatggtgaacttcattaaggagaacctgctgggt
tctctaaaggagtttcggaaccgttttattaatccgatccagaacggtcagtgcgcagac
tccacccccgctgatgtcagactgatgaagaatagatcgcatgtactccatcagttgatg
tcaggattcatacagaggcgggactactcagtcttgatgtcctgtttgccgccaaagcac
gagtatgtgctgtcagtcaggatgacgaatctgcagtgtcggttatacacacactatctg
cagaactacacagggaaaggagcaggtgtgagcagtttgtttcaggaccttcatgttctg
agtttgatatggactcatccctggtgtcttaaacttgctcagctgagcaggaataagggg
aaagaggaagagcctgctcctgtcttcaaaggtctgggtgctggtttggccagcaattct
gtaaatccgaatgactctgaaaggagagatgcaacaagcacaggtttagtgggtgatgga
gagagaaatactgatccagtctccttggtcagcagggccaatcaaaatccacagaatcca
gatgtcacaaacacagccacaggggaaatttctggcggggaagctggatttgttgtaggt
aacgggccgtctgccaactggtatctgccgtttgtatcagcggttgatgccaaagtgctg
gagcattctgggaaattgcagttgctactggagattttacactgggcagaggaactagag
gacaaagtattggtgttcagtcagtctctgatatcgctggaccttattgagagtttcctc
ctatatgcagatgagaccaaggggaaaaaatgttgtccatacaaaggagaaaaagcgtgg
gttaaaaataaagattattatcgtttggatggcaacaccagtgcttgtgctcgcaagaga
tgggctcaagagtttaacaacactaaaaacataagaggaaggttgtttctgatctccact
cgtgcagggtctctgggaatcaatctggtcgctgcaaaccgggtcgtggtgtttgacgct
tgctggaatccgtcatatgacatccagagcatcttcagagtctatcgctttgggcagaaa
aaaaccgtttatgtgtaccgttttctggcccaggggaccatggaacagaacatttatgag
cggcaagttgctaaacagtccctgtcctctcgtgttctggatcagcagcagattcagaga
cacttcacacacagtcagctgaatgagctgtaccgcttccagccagacctacggcccagt
aaacacacagaaacgcctgtggatgacctgttggctcagatgctgcagagctgtgggcag
ctcatagtaagttatcatgagcacaactcattgttagaccaccgggaggaagaggagctg
agcgaggaagagcgtagagcagcctgggatgaataccgtgcagaaaagaaggcctctgta
cagaactccaatgaactcatccccagaaatgccaaccaggcactacagcagcctctggct
tctcaaaacttcgcctatacaaccaagggtgttccttcaactacttcattgcacgtgaaa
caaggcaatgctgaaccttctgttgcttggatcacttataactccaacatcgcatttcaa
ctggggaatcccaaagtggtttatttagttccaaaacaaaacacatag
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integrated database retrieval system
