Onychostoma macrolepis: 131540658
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Entry
131540658 CDS
T09350
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
omc
Onychostoma macrolepis
Pathway
omc04010
MAPK signaling pathway
omc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131540658 (cacna1ba)
04020 Calcium signaling pathway
131540658 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131540658 (cacna1ba)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131540658 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
131540658
NCBI-ProteinID:
XP_058631745
LinkDB
All DBs
Position
05:20915546..21021650
Genome browser
AA seq
2272 aa
AA seq
DB search
MILATIIANCIVLGLEQHLPALDKTPMSKRLDDTEPYFIGIFCFEAGIKIIALGFAFHKD
SYLRNGWNVMDFVVVLTGILTIVGPDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAILMFAIIGLDFYMGKFHRTCFRNDTGEQAADFPCGLDPPARTCEGG
TVCTVYWTGPNFGITNFDNILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVML
AEEDKNAEEKEDGAWYKRKCNNPVLKRAKKSKNDLINAEEAEDHFTDILSVAPQGSPFTR
TSVKSSKNESSSYFRRKEKRFRFFIRRMVKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWL
TYALYLAEFVFLGLFLIEMSLKMYGLGPRTYFHSSFNCFDFGVIIGSIFEVIWAAVKPGA
SFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQL
FGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHRGMFCSVYFI
VLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSAA
NISITAFIRPNPGALSCSSSNSSSHSPSYVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIR
KHILASSEALYQEDPRLSSNLHLRPDMKTHLDRPLVVEPRCDGPISPHRGWDKPQDLQGE
GGTPEERVPPVTEPPPSHPPRKHHRHRERPSNETNENSDTGHGKEGRHHVHHSRSKEHDG
TRCKEGKSDRSRSREGGRRHHHQSSVDEGVGGGEREHRHHHSHRHSREGNGVVSAGKSER
RSRQKDGSRSGTREGCSRGENGGNGGRRRHRPRTSKAQSTLEGEEQHGNGEQEEGKSHSH
RHTDMGGDSLAVNPHQPSVGNRWCLEKPEDLDNKQNIGQTGGMGTHIPVTVTSPPGETTL
IPMNSIDSETMPMTEKNLEDLNQSSPRPILPFSSMFIFNPTNPVRRLCHYIVSLRYFEMC
ILVVIAMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYF
RDLWNILDFIVVSGALVAFAFSSHQSVNRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGLFLD
YDKDEVAAQPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGY
RMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKP
LTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIALNTVVLMMKFHEAPEVYEAMLKYLNI
VFTALFSMECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTEINDRLLNLSFLRLF
RAARLVKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNDDS
AINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSERTCDAGSGIHGKECGSDFAYFYF
VSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLD
MYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLAS
GMVAQRLSDAELKKELATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRA
KRLQMQQQQQREQAGPGSQNKVSALLEPILPLTHMQDQAVNSVDSASEFQAQTRPSSTTL
NNGCTHLENTIKGSSSWASEKSKEVPRSKRRSMSRGQSEDASNANTAQESVEMRKMENSA
NTVTSGGLDGQGRAVSMPKLNAEMQRSHSRHSPGTLLETIPDSPMRRSASTFAPQRPQEV
NLNDYTLAKPVQERHHHHHHHHRCHHRRDRDKKQRSLDRSPTGQHKATGTAADPVEERPH
DRGRSHERKHHSSSAEKQRYYSCDRYGSREHCPSKSAVASCATSPSEAQEASLNKQGSGW
AKGSPVLLTSGASTPSRGRRQLPQTPLTPRPSVAYRTANSSPVQFLGTQAGLLPPSPGRL
SRGLSEHNALLHSGSISSSPAPVSRINSEPFLGPPDHPAGLQPEAFAVFQEDPSPQTGRS
AWTVGMPIVAIPPPPQQQFRGVPNGYHFITGPGASRGRGRQYYPEAEVDDWC
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgccacaattatagcaaactgcattgtactgggcttggagcagcatttacca
gctttagacaagacacccatgtcaaagcgactggatgacactgaaccctacttcattgga
atattttgcttcgaggccgggatcaagatcattgctctaggctttgcttttcataaagac
tcctacctccgcaatgggtggaatgttatggactttgttgttgtattgacagggattctg
accatagtggggccagactttgatttgcggacactcagggcagtaagagtcttgcggcca
ctcaaactggtgtctggaattccaagtctccaagtggttctgaagtccatcatgaaagca
atggttcctctgcttcagattggccttctgctcttttttgctatactcatgtttgccatc
attggcctagacttctacatgggcaagtttcaccgcacctgcttcagaaacgatactggg
gaacaggcagctgactttccatgtggactggatcctccagctcggacatgtgaaggtggc
acagtttgtacggtttactggaccggtccaaatttcggcataacaaactttgacaacatc
ctgttcgctgtgctcaccgtcttccagtgcatcactatggaaggatgggtggacatcctt
tacaatgccaacgatgcctcagggaacacctggaactggctctacttcatcccactcatc
atcattggctctttcttcatgctcaacttggttctgggggtgctgtcaggggagtttgca
aaggagcgagagcgtgtggagaaaaggcaggagttcctgaagcttcgcagacaacagcag
atcgagagggagctgaccggctacctggagtggatctgcaaagcagaagaagtaatgctt
gctgaagaagataaaaatgcagaggaaaaggaggatggtgcctggtacaagaggaaatgc
aacaacccagtattgaagagagccaagaagagcaaaaatgacctcatcaatgcagaggaa
gcagaagaccacttcactgacatcttatcagtcgctccccagggctctccattcacccgt
acaagcgtgaagagcagcaagaacgagagctcctcatactttcgcaggaaagagaagagg
tttcgcttcttcatccgccgtatggtgaaggcccagagcttctactggactgttctgtgt
atagtgggactgaacacactatgtgtggctatagttcactacgaccagcccgactggctc
acatatgcactctatttggcggagtttgtgttccttggtctgtttctaatagagatgagt
ctgaagatgtatgggctcgggcccaggacctactttcactcctcgtttaactgctttgac
tttggggtgattataggaagcattttcgaggtgatttgggcagcagtaaaaccaggagcc
tcttttggcattagtgtgttgcgagcactgcgtttgctgaggatattcaaggttaccaag
tattggaactcgttacggaatctggtggtgtctctgctcaactcaatgaagtccatcatc
agtctcctgttcctgctgtttctcttcattgtagtgtttgctctgctggggatgcagctc
tttggaggacagtttaattttgaagatgagaccccgacgaccaactttgacacattccca
gctgctatcctgacagtgtttcagattctgacaggagaggactggaatgctgtgatgtat
catggaattgaatcccagggaggagtgcaccggggaatgttctgctctgtgtacttcatt
gtgctcacactgtttggaaactatactctcctcaatgtgtttttggccatcgctgttgat
aatcttgccaatgcacaggaactcaccaaggatgaggaggagcaggaggaggccatcagt
aagaaactggctctgcagaaagccaaggaggtaaaggaggtcagccccatgtcggccgct
aacatttccatcacagcttttataaggccaaatcctggtgctctttcatgcagctcctcc
aactccagctctcattcaccgagttatgtctgctcccctgcacatcactacttgagtaaa
gaacagcagcgttctctaaagatgatgtccgtgtgggagcagcgcaccacgcagattcgg
aagcacatactggctagcagcgaggcgttgtaccaagaggacccccggctgtcctccaac
cttcacctccgccctgacatgaaaacccacctggaccggcctctggtggtggaacctcgt
tgtgatggtcccatcagtccccacagaggctgggacaaaccccaggacttgcaaggggag
ggtggcacaccggaggaacgagtaccccctgtgacagagcccccaccgtcacacccacca
cgcaaacaccaccgtcacagggagcgtccctccaatgagaccaatgaaaacagcgacaca
ggtcatggcaaagaaggccggcatcacgtccatcacagccgcagtaaggagcacgatggg
acacggtgtaaggaggggaagagtgacaggagccggagcagagaggggggccgcagacat
caccatcagagttcagtggacgagggagtgggaggtggggagagagagcatcgtcaccat
cactctcataggcatagcagagagggcaatggagtggtcagcgcagggaagagtgaacgg
cggtccaggcagaaagatggctcacgttcaggaacaagggaggggtgctccaggggcgaa
aatggaggtaatggagggaggagacggcacagaccacgtaccagtaaagctcagtcgaca
ctggaaggagaggagcaacacgggaatggagagcaggaggagggaaagtcacacagccac
aggcacacggacatgggaggagattcattggctgtaaacccccatcagccttcagttggg
aaccgttggtgtcttgagaaaccagaagacttggacaataaacaaaatattggtcagact
ggaggaatgggcacacacatacctgtgaccgtcacgtctccccctggagaaacaaccctt
attcccatgaacagtatagacagtgagacaatgcccatgactgagaagaatctggaggat
ctgaaccagagcagccctcgtcccatcctccccttcagctccatgttcatcttcaaccca
accaatccggtgagacgtctgtgccactacattgtgagcctgcgctactttgagatgtgt
atcctggtggtgattgccatgagcagtatagccctggctgcggaggacccagtccaagcc
aatgcccctcgtaacaatgtcctgaagtatttagactacgtcttcactggtgtcttcaca
tttgagatggtcattaagatggtggatttaggtttattgctgcatcctggttcctacttc
agagatctgtggaacattctggacttcattgtggtcagtggtgcactggtggcattcgca
ttctcatcacatcaaagcgtaaacagaggaaccaagggcaaagacatcagcactatcaag
tccctgagggtgttgcgagtcttgcgaccactgaagaccattaaacgtctaccaaaactg
aaggccgtgtttgactgtgtggtgaactccctgaagaacgtgttgaatatcctcattgtc
tatatcctgttcatgttcatcttcgctgtcattgctgtgcagctcttcaagggcaagttt
ttctactgcacagacgagtccaaaggcctggagaaagactgcagagggctgttcttggat
tacgataaggatgaagtggcggctcagcccagggaatggaggaaatatgagttccactac
gacaatgtgctgtgggcgtttctcactctcttcaccgtttctactggagagggctggcca
acggttttgaagcactctgtagatgccacttttgaggaccagggtcccagtcctggctac
cgcatggagatgtccatcttctacgtggtctactttgtagtcttcccctttttctttgtc
aacattttcgtggccttgataatcatcacattccaggaacagggtgataaggccttgtca
gagtgcagtctggagaagaatgagagagcctgcatcgactttgctatcaatgccaaaccg
ctgacccgctatatgccacagaaccagcaatcctttcagtaccgcttgtggaagtttgtg
gtctctccaccgtttgagtactccatcatgatcatgattgctctcaacactgtggtgcta
atgatgaagttccacgaggcacctgaagtttatgaagctatgctcaagtatctcaacatt
gttttcactgctctcttttcaatggagtgtattctcaagattattgctttcggccccttg
aattacctgaaagacgcctggaatgtgtttgactttgtgactgtgctgggcagcatcact
gacatcgtagtcactgagattaacgaccgtctattgaacttgagtttcctgagactcttc
agagcagccagactcgtcaaactcctccggcagggatacaccattcgcatcctgctctgg
acattcgtccaatcttttaaggcactgccttatgtttgccttctaatcgccatgctgttt
ttcatctacgccatcattggaatgcaggtgtttgggaatattgacttgaacgatgatagc
gccatcaatcgtcacaacaactttcgcactttcctccaagcacttatgctgttattcagg
agtgccactggcgaagcctggcatgagattatgctgtcctgtctgagtgagcgcacctgt
gacgcaggctcaggcattcatggaaaggagtgcgggagtgactttgcctacttctacttc
gtctccttcattttcctctgttctttcttgatgttgaacctgtttgtggctgtcattatg
gacaactttgaatacctgacacgtgactcctccatcttgggccctcaccacctggatgag
tttatccgagtgtgggcggagtatgacccagccgcatgtggccgtatcaagtacctcgat
atgtatgagatgctgctccacatgtccccacctttaggtttgggaaagaaatgccctcca
cgaatcgcctacaagcggctggtgaaaatgaacatgcccattgcagatgacaacagtgtg
cactttacctccaccctgatggctctgatccgcacagccctggagattaaactggcttca
ggcatggtggcccaacgtctgtcagatgctgaactgaagaaggagctcgctacagtctgg
ccaaacctgtctcagaagactatggacctgctggtcactccacacaaacccaatgagctt
acagtggggaaggtatatgcagcacttatgatttttgactattacaagcaaaacagagcc
aaaagacttcagatgcagcaacagcagcagagagaacaggcaggacctggatctcagaat
aaagtcagtgctcttttagagcctattctcccactaacccacatgcaagatcaggctgtg
aacagtgtagattcggcctcagagtttcaagctcagaccagacccagctccaccacgctc
aacaatggatgcacacatcttgaaaacacaataaaaggatcttcatcctgggcctcagag
aagtccaaggaggtcccacgatctaaacgacggtcaatgtccagaggtcaatcagaggat
gcctcaaatgcgaacactgcccaggagtcagtagaaatgaggaagatggagaacagtgcc
aacacagtgacctctggtggccttgacggccaaggacgtgcagtatccatgccaaaactc
aatgcagagatgcagaggagtcattcccgtcattctcctgggactttactggaaaccatt
cctgattcccccatgagacgctccgcatccacttttgcaccacagcgccctcaggaggtg
aatctgaatgactacactttggcgaaacctgttcaagaacgacatcaccaccatcaccac
catcaccgatgccatcatcgtagggacagagacaagaaacagagatctctggacaggtcg
cccactggacaacacaaagctacaggcacagcagctgaccctgtagaggagagaccacat
gaccgaggtcgttcccatgagaggaagcatcattcgtcttcggcggagaagcagcggtat
tactcatgtgatcgctacggcagtcgggaacactgtcccagcaagtctgccgtggcaagc
tgtgccacctcacccagcgaggcccaggaggccagtctcaacaagcagggcagtgggtgg
gctaaggggagcccggtgttgttgacctcaggggcgagcactccaagccgtgggcgcaga
cagctgccccagaccccccttactcctcgtccctccgtggcctacaggactgccaactcc
tcccctgtgcaatttctgggcacacaggccggcttgcttcccccgagtcccggcaggctg
agccgcggtctgtccgagcacaacgccctcttacacagcggctccatctccagctcgccg
gcccccgtcagtcgcattaactcagaacccttcttggggcccccggaccaccctgccggc
ctccagcccgaagccttcgccgtcttccaagaagatccgagccctcagacgggccgttct
gcctggactgtagggatgccgatcgtggcgattcccccacctccccaacagcagttccgc
ggggttcccaacggataccacttcatcacgggccccggggccagcagaggacggggacgg
cagtactacccagaggcagaggtggacgactggtgctag
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integrated database retrieval system
