Onychostoma macrolepis: 131540758
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Entry
131540758 CDS
T09350
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
omc
Onychostoma macrolepis
Pathway
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131540758 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omc04990
]
131540758 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
omc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
131540758 (pdlim5a)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
131540758
NCBI-ProteinID:
XP_058631972
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Position
05:40597186..40659120
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AA seq
551 aa
AA seq
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MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKSSSGKLNLSLQKASSLPKPDVAPKDDSVEIIKPVPMTTSIPSSSDITN
STHITSSSNRSARPFGGAGSPHIACIPSAASAFAPASSAQNPNPQAPPTPTDDSPNHLPA
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGLPRKPITETDIEFYHIPT
HGDASRKRLMEDTEDWHPRTGTSQSRSFRILAQITGTESDRSQEAESAKKTTNDELDDSQ
PSAHVTCPIKTMIKAPGTPVRSTAGLITPTFGVMSSSTPLGPALDQPMPRPHPKDEASLV
QMAEHIPAGTRTPVCAHCDMIIRGPFLMAMGKSWHPEEFMCAHCSVSLSELGFVEEQGSV
YCQHCYEEFFAPTCARCQYKILGEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPY
CERDYYNLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSLEGQTFFSKKDKP
LCKKHAHTLKI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccagccccatggggcttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctgtcggatggaggaaaggct
gctaaagcaggagtggctgtgggagatctggtcctgtccatcgacggcatcagcactgac
ggcatgaaccacctcgaggctcagaataagatcaaatccagctcaggcaaactcaacctc
tccttacagaaagcttccagtcttccaaaaccagatgtggcaccaaaggatgattctgtg
gaaatcatcaaacccgttcccatgacaacctccattccatcttcctctgacatcacaaac
tccacccacatcacttcatcctccaataggagcgctcgtccgtttggaggggcggggtca
ccacacatagcctgcattccatctgccgcgtctgcttttgcacccgcctcctcggctcaa
aaccctaatccacaggctccgcccactcctactgatgattcacccaatcatctaccggcg
gtgccccgcccttcagtgtataacacacccatcaatctctactccaatgagaatgcctgt
gaggttgccatgggccagaggcggggcctgctggaaagccagggtgaaagctctcagctg
aatggacttcctcgtaaacctatcacagagacagacattgagttttaccacatcccgact
cacggtgatgccagcaggaaacgcctcatggaggacacagaggactggcacccacggaca
ggaacttcacaatcccgctcgttccgtatcctggcccaaatcaccggcactgaatctgat
cgctcacaggaggctgagtcagcgaagaagacaacaaatgacgagctggatgattctcag
cccagcgctcatgtcacctgtcccataaagaccatgatcaaagccccgggaacgcctgtc
agaagcacagcaggtctcatcactcccacttttggtgtcatgagcagcagtactccttta
ggccccgccttggaccagcccatgccccgcccacatcccaaagacgaagcctcattggtc
cagatggcagaacacatccctgctggaacacgcactcctgtgtgtgctcactgcgacatg
atcatcagggggccgttcctgatggcgatggggaaatcgtggcaccccgaggagttcatg
tgcgctcactgcagtgtgtctctgagcgagctgggttttgtggaggaacagggctctgtt
tactgccagcactgctatgaggagttcttcgccccgacctgtgcgcgctgccagtacaaa
atcctgggggaagtgatcaatgcactcaagcaaacctggcatgtgtattgtttcctgtgt
gcatcttgccagcaaccgataagaaacgatacttttcatcttgaggatggagagccgtac
tgcgagagagattactacaatctgtttgggacgggctgccgtggttgtgatttcccgata
gaagcaggagacaagtttctggaggccctgggcggcacctggcacgacacctgcttcgtg
tgctcagtgtgcagcgtcagtctggagggtcagacgttcttctccaaaaaggacaaacca
ctttgcaagaaacatgctcacactctcaaaatataa
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