Onychostoma macrolepis: 131540790
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Entry
131540790 CDS
T09350
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
omc
Onychostoma macrolepis
Pathway
omc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131540790 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131540790 (slit2)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
131540790 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
EGF_TEN
LRR_1
LRR_14
hEGF
EGF_Teneurin
LRR_EndoS
EGF_DL_JAG
JAG1-like_EGF2
EGF_3
Gurken_M
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
131540790
NCBI-ProteinID:
XP_058632032
LinkDB
All DBs
Position
01:complement(30921705..31003128)
Genome browser
AA seq
1519 aa
AA seq
DB search
MFVLKAVVLCALLGGAGAQSCPSQCSCSGTAVDCHGQSLRSVPRNIPRNAERLDLNANNL
TKITKADFAGLRHLRVLQLMENKISSIERGAFQDLKELERLRLNRNNLQVLPELLFLGTT
KLFRLDLSENQIQGIPRKAFRGATEIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI
SRLSVASFNHMPKLRTFRLHSNNLLCDCHVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNI
AEVQKKEFVCTGPQSHSSCSVLQCPELCTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQ
NSIKIIPPGAFSPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKALFD
GLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQ
NPFMCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIPGV
EDYRSKLGGDCFADLACPEKCRCEGTTVDCSGQKLTKIPDHIPQYTAELRLNNNEFTVLE
ATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLESVHYSMLKGLSGLR
TLMLRSNKISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCN
CHLAWLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAIQDFACEDGNDENSCSPLARCPA
ECSCLDTVVRCSNKGLKILPKGIPKDVTELYLDGNQFTQVPLELSNYKHLTLIDLSNNQI
STLSNHSFSNMSELLTLILSYNRLRCIPVKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLS
SLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCTGPGEMTDKLLLTTPSKKFTCTG
PVDVSILAKCNPCLSNPCKNDGTCSNHPVDFYRCTCPYGFKGQDCEEPIHACISNPCQNG
GTCHLKDGEENTHWCVCPDGFEGDECEINIDDCEDNDCENNSTCVDGINNYTCLCSPEYT
GELCEDKLDFCASELNLCQHDSKCILTAKGFMCECTPGYTGEHCEVDFDDCEDNKCKNGA
QCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDHYDCANGAQCVVKDTDPVCQCLH
GYEGVHCEKLVSVNFINRESFLQIPSNLITEQANISLQIATDEDNGVLLYKGDNEHIAVE
LYRGRLRVSYDSGSYPPSAIYSVETINDGSFHVVELVAKDQSLSLSIDGGSPKSINTASS
PSPGPSPAPLYLGGIPQQSGLASLRSSGRNGSSFHGCIRNLYINDQLQDLTQFLLQEGVV
PGCQPCQRSVCAHGQCHATGQSSFSCECEAGWTGPLCDQQINNPCDGNKCIHGSCLPINS
YSYSCRCHPGFAGVLCDEEEQLSPCQYIACKHGRCRVSGLGKAYCECNSGYTGPSCDREM
ACRGERVRDHYQTQQGYAACQSTEKVSRLDCRGSCGDGTSCCAPLRSKRRKYTFQCTDGS
SFVQEVEKVVKCGCTKCPS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttaaaagcagtggtgctatgtgcattgctcggcggggctggggctcagtcg
tgcccgtctcagtgctcctgcagcgggacagcggtggactgccatgggcagagtctgcgg
agcgtgccgcggaacattccccgcaacgctgagcgacttgacctgaatgcaaacaatctg
actaaaatcactaaggcagattttgcgggactgcggcacctcagagttctgcagctaatg
gagaacaagatcagttctattgagagaggggcatttcaggacctgaaagagctggaaaga
ctgcgtctcaacaggaataatcttcaggttcttccggagttgctgtttctgggcacgacc
aaactcttcagacttgacctgagtgaaaatcaaatccaggggattcccagaaaagcattc
agaggagctactgagatcaaaaacctgcagctggactataatcagatttcctgcattgaa
gacggagcgttcagagctctgcgggacctagaagtactcacactgaataacaacaatatc
tctcgtttgtcagtggccagttttaaccacatgcccaagcttaggacatttcgtctgcac
tcaaataatctgctgtgtgattgccatgtggcctggctctctgattggctgagacagagg
ccccgccttggcctctacacacagtgtatggctccgccctctctgaggggccacaacatt
gctgaggttcagaagaaagagtttgtgtgtacagggccccagtcacactcgtcctgtagt
gtgctgcagtgtcctgagctgtgcacctgcagtaataacatagtggactgccgggggaaa
ggactgactgaaatacccaccaacctgccagaaaccatcactgaaatccgactggagcag
aactccatcaagattattccaccaggagcattctcaccttacaaacggctgcggagaata
gatttgagtaataatcaaataactgaattggcttcagactcctttcaaggtctccgatct
ttgaattctctggttttatatgggaataaaatcactgaacttcccaaagccctttttgat
ggactgttctcattgcagctactgttgctaaatgcgaacaagatcaattgtttgcgcgta
gattctttccaagacctgcagaatctgaatcttctgtcactttatgacaacaaactccaa
accattgcaaagggaaccttctcttctctccgagccatccaaacacttcatctggcccag
aaccccttcatgtgtgactgccatttgaagtggttagctgactacctgcaagacaacccg
attgagaccagtggagctcgatgcaccagtccccgccggctagctaacaaacgcatcggc
cagatcaagagcaaaaagttccgctgttcagctaaagaacaatattttataccaggtgtg
gaagactaccgatcaaaactaggtggggattgcttcgctgacctggcatgcccagagaag
tgtcgctgtgaaggaaccacagtggactgctctggacaaaagctcacgaaaatcccagac
cacatacctcaatatacagcagaactccgcttgaacaataatgaatttacagtgctggag
gctacaggaatctttaagaagcttcctcagctgcgcaaaattaatcttagtaacaataag
atcacagatattgaggagggcacatttgagggggccagtggagtgaatgaactcatactg
acgagcaatcgcttagagagtgtccactacagcatgctgaaaggcctcagcggcctccgc
acactgatgttgaggagtaacaagataagctgtgtcaataacggtagttttactggtctg
agctctgtgaggctgctctccctgtatgataacctgatcacctccatgtccccgggagcc
tttgacacactacattccctctcaacactgaacttgctggccaatccgtttaactgtaac
tgtcatctggcctggctgggggaatggctccgtaagaaacggattgtcacgggtaacccc
cgctgtcagagcccatactttcttaaggagatccctattcaagatgtggccattcaagac
tttgcctgcgaagacggtaatgatgagaatagctgttcacccttggctcgctgtcctgct
gagtgttcatgtttggatacggtggttcgctgcagtaataaaggacttaagattttaccc
aaaggcattcctaaagacgttacagaactctatctcgatggcaaccagttcacgcaagtc
cctctggaactatccaattataaacacctcactctcatcgatttgagtaataaccagatc
agcacattgtccaaccacagcttcagtaacatgtccgagctgctcaccctaattttaagc
tacaacagactgaggtgtattcctgtaaaagctttcgatggcctcaagtctctgcgtctg
ttgtctctccatggtaatgatattgctgtgatcccagatggagctttcaaagatctgtcc
tcgctctcccacctggctttgggagcaaaccctctgtactgtgattgtcacatgcagtgg
ctctctgactgggtaaagagcggctacaaggagcctggaattgcacggtgtaccggtcct
ggagagatgaccgacaaactactgctgactacaccctccaagaaattcacatgcacaggt
ccggtggatgtgagcattttggcaaaatgtaacccttgtttatccaacccttgcaagaat
gacggaacctgcagtaaccatcctgtcgatttttacagatgcacctgtccatatggtttt
aagggccaagactgcgaggaaccgattcatgcatgcatcagtaacccctgtcagaatgga
ggcacctgtcatctgaaggacggagaggagaacactcactggtgtgtgtgtccagatgga
tttgagggcgacgaatgtgagataaatattgatgactgtgaagacaatgactgtgagaat
aattcaacgtgtgtggatggtatcaacaactacacctgtctctgctcacctgaatacaca
ggggagctgtgtgaagataagctggatttctgcgcttcagagctaaacctgtgtcagcat
gactcgaaatgtattctaaccgctaaaggattcatgtgtgagtgtactccaggttatacc
ggggaacactgtgaggtggattttgatgattgtgaagataataaatgtaaaaatggggct
cagtgtaccgatgctgtgaatggctacacgtgtgtgtgtccagaagggtacagtgggttg
ttctgtgagttctcccctccaatggtcctgccgagaacaagtccgtgtgaccactatgac
tgtgccaacggtgcacagtgtgttgtcaaggacacagatcctgtgtgtcagtgtctccat
ggttatgaaggcgtgcactgtgagaagctggtcagcgtcaacttcatcaatagagaatcg
ttcctgcagatcccctccaacctcatcacagaacaggccaatatatcattacagattgcc
acagatgaggataatggagtgctgctgtataaaggagataatgaacacattgcggtggag
ctctacagaggtcgcctgagagtcagttatgactccggatcctaccccccttctgccatc
tacagtgttgagactataaatgatggcagttttcatgttgtggagctggtggcaaaggat
caatctctgtctctttccattgatggaggaagccccaaatccatcaacaccgccagcagc
cccagcccaggacccagccctgctccgctttatctcggtggaattcctcagcagtctgga
ctagcctcgttgcgttcctccgggaggaacggctcaagtttccacggctgtatccgaaac
ctctacattaacgaccagctccaggacctcactcagttcctgctgcaggagggggtggtg
cccggctgccagccctgccagcggagtgtgtgcgctcatgggcagtgccatgctactgga
cagtcctccttcagctgtgagtgtgaggcaggatggactggcccactttgtgaccagcag
atcaacaacccatgtgacgggaacaagtgtatccacggctcctgtctgcccataaactca
tactcgtacagctgtcgctgtcatccaggctttgcaggtgtattatgcgatgaagaggag
cagttgagtccctgtcagtacatagcgtgtaaacacgggcgctgccgtgtgtctgggctg
gggaaggcctactgtgagtgcaacagcggctacacagggccaagctgcgatagagagatg
gcgtgtcggggggaacgggtccgagatcactatcagacgcagcagggctacgcagcgtgc
caaagcacagagaaggtctcccgtttagattgtcggggcagctgcggggacgggacctcc
tgctgcgcccccctccgcagcaaacgcaggaaatacaccttccaatgcacagacggatcc
tcttttgtacaggaggtggaaaaggtcgtcaagtgtggctgcacaaaatgtccatcctaa
DBGET
integrated database retrieval system
