Onychostoma macrolepis: 131541293
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Entry
131541293 CDS
T09350
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131541293 (zc3h12b)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
131541293 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
UBA_N4BP1_C
TNFR_ELAPOR1_6th
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
131541293
NCBI-ProteinID:
XP_058632943
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All DBs
Position
05:5478212..5501986
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AA seq
1007 aa
AA seq
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MVLELAAPAGAGPALQRCIPHIQRVFRVRVSCSTAESSCESPNAGSSIIVNIEDGKEEDC
TKAKEYIVSLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRGCREPQPLPAATGHDSPEEEEEEDEDAGEDGSSSESDGEARSRSG
SSGGAGSVAGSGEGATGRRQDPLIATKPHRQLCRSSCLDRPSFSQSCTLQELRADDTQRA
QMPLRQTSDRDYQTKIDFALKLGYSGEQVETVLSKLGSSALINDVLAELVRLGNKGDPEN
QAAASTAGLTPRAVGAKEAVSPEASLEEDTSDTYDNLRPIVIDGSNVAMSHGNKEVFSCL
GIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKEKILVFTPSRRVQG
RRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPD
DPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKCKYYHPERANQPQRAV
ADELRAFAKLSAVKTMSEGALVKCGTSGSANKGDGSSEAKRVAPKRQSDPSIRSVACEQE
ERLCPARKAEANSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVPGSLHFTHSSLEHA
GSVQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTISLQDSFCSLEQPEP
VGVGGGYPGRASMCQEPGRSHSSDSFSSYSGEMYLNSLEGSLDDSMKGPPSQTQTQPSAQ
TRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQSSAHLAPHSQHPVVGTRSSCPGDYPPV
SQNVLPSASPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGNEP
YSYGGYGLTGALMPCCERVMVRSMPEKMEQIWRSPWDSVPPPPPSARGPAEEPQERHPIP
EHQYQTYRNLCNIFPAYVVHLVMEENPHMTDPQQLAAVIVTKLRTCH
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgccgcgcccgccggtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgggtcagagtgagctgcagcaccgccgagtccagctgcgag
agccccaacgccggctccagtatcatcgtaaacatcgaggacggcaaggaagaagattgc
actaaagctaaagagtacattgtgtctctgatcagtcctgtgcataagcaccgtgagcgt
ttgactctttggctgcagcggcgactgcatgccctgcgtgcagctattgagtacgagagc
tgtgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcgcaggta
acagctgcatgcgctatgctgcagcgcctgaagatggagcaccgtggctgccgcgaaccc
cagcccttgcccgctgccaccggccacgactctccagaagaagaggaggaggaggatgaa
gatgccggggaagatgggagcagttctgagagtgacggagaggcgcggtcacggagcggg
agttctggaggcgctggcagcgtggcagggtcaggagaaggagcgaccggaaggaggcag
gacccactcatagcaaccaaacctcaccggcagctgtgccgctcatcctgtttggaccgt
cccagcttcagccagagctgcaccttacaggagttacgtgcagatgacacccagagagcc
caaatgcccttgcgtcaaaccagcgatcgagattaccaaaccaaaatagactttgctctg
aaactgggctactcaggagagcaggtggagactgtgctgagtaaactggggtccagcgca
ctaatcaatgatgtattggccgagctggtacggctagggaataaaggagatccagagaac
caggcagcagcgagcactgccggtttaacaccacgggcggtgggagccaaagaagccgtc
agccccgaagcatcgctggaggaagacacatcagacacgtatgacaacctccgaccaatt
gtgattgatggatccaatgttgccatgagccatggaaacaaagaggtgttctcatgcctg
ggcattcaactggctgttgattggttcctggagaagggccacaaagacatcacagttttc
gtcccagcatggaggaaagaacagtcaagacctgatgcaccaatcaaagatcaggagatc
ctacggaaattggagaaggaaaagatcctcgtattcacgccgtctcgcagagtccaaggc
cgacgagtggtttgctacgacgaccgttttatcgtcaagctggcttgcgactcagacggg
atcatcgtgtccaacgacaactaccgagacttgcagaatgagaaaccagagtggaagaaa
tttattgaggaacgactcctcatgtacagcttcgtcaacgacaagtttatgcctccggat
gatcctttaggcagacatggacccagtttggaaaattttctccgcaaacgaccagtggtt
ccagagcacaagaagcagccgtgtccttatggtcagtacagcaaaagtaagaagtgcacg
tatggccataagtgcaagtactaccacccagaaagagccaaccaaccacagcgggctgtc
gcagacgagctcagagcctttgccaaactctccgctgtaaagacaatgagtgagggggca
cttgtcaaatgtgggacctctggttctgctaacaagggagacggtagctctgaggcaaag
cgagtggcacccaagcgccagtctgaccctagtatccggtcagttgcgtgcgagcaagaa
gagagactttgtccagcgcggaaggctgaggccaattcggtaccatcattagtttcggcg
cttagcgttccaactatgccgctgacgaaaagtcacgcggcaggcgctctgaacacgcgc
tcggcgagcagccctgttccagggtctctgcactttacccacagctcgctcgagcatgcg
ggcagcgtccaatatccccccatcctagtcaccaatagccagggcgcctctgtggcttac
ggtgagccgttccccaagtacgactctgttgtaagcgaccacggctactattccatgctc
agtgacttctccaccatcagcctccaagacagtttctgcagtcttgaacagccagagcct
gtaggggtgggtggaggatatcctggcagagccagcatgtgccaagaacccggccgaagt
cattcgtcggactccttctcgtcctacagtggagagatgtacctcaactcattggagggc
agcctggatgacagcatgaaagggccaccgtcgcagacccagacacaaccttcggcgcaa
acgcgccttcaagcctttgctcacggtttccaccatgaggccttgacacgtgtgcagagc
tacggaacggatgaacccaaaccgggacctcgaaagcagtcctctgcccaccttgcacca
cactcccaacacccggttgtcggcacccgatccagctgcccaggagactaccctcctgtg
tcccagaacgtgttgccttctgccagcccttcccagcagggtcggtccttaggcatgact
cgaatggacagtatctctgactcacggctctatgagagcaatccgctgcgccagcggaga
cctcctctttgccgagagcagcatgctagctgggaccctttgccgtgtggtaacgagccc
tacagttacggaggctacggattaactggagccctcatgccttgctgtgaaagggtgatg
gtccgcagcatgcccgagaagatggagcagatctggaggtccccgtgggatagtgtgccg
cctccaccgcccagcgctcgtgggccagcggaggaaccccaagagcggcaccctattcca
gaacaccaatatcaaacctaccgaaacctctgtaacatcttcccggcgtatgtggtccat
ttggtcatggaggagaaccctcacatgaccgatccccagcagctggctgccgtcatcgtc
actaaactgcgcacttgccactaa
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