Onychostoma macrolepis: 131541523
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Entry
131541523 CDS
T09350
Symbol
cspg4ba
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omc00535
]
131541523 (cspg4ba)
04091 Lectins [BR:
omc04091
]
131541523 (cspg4ba)
Proteoglycans [BR:
omc00535
]
Cell surface proteoglycans
Others
131541523 (cspg4ba)
Lectins [BR:
omc04091
]
C-Type lectins
Others
131541523 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TMEM154
Jag_N
Motif
Other DBs
NCBI-GeneID:
131541523
NCBI-ProteinID:
XP_058633285
LinkDB
All DBs
Position
05:complement(13982644..14002023)
Genome browser
AA seq
2390 aa
AA seq
DB search
MGVTLLNGLLLLFVGLAQGASFYGDGFVQLKGTETSSRNTLHIRFRTSSLSGLLFLAAGQ
NDFLLLEMNAGRLQVKLDLGSGEQILLSDSGTQLNDLAWHTAELFHDIYNVTLTVDNHSK
TSLRMPGPEQELHINGGLYVGGTGGLDQAYLSRDLNGFRGCLDEVIFNQHNLLSSLRPYS
GFKNVYEVSLGCSPQFFANEDDPISFFSSRAYISLPPWTAQHEWAFECSIHTSAEEGIII
YNSARQGDFVALEIQKGLLVAMVGKDGSKTELRSLTFINDNKWHNIQLFFTPKNLQLTVD
GETVKSIITSRSKTFHLKGSLFLGGIDDSTRSEVRKVGLSSVAGKRIKGGSFKGCFRDIK
INNVKMGLPNAVVTKDISVGCEPEKELDISTTVSPTTLPITLVDSVTPLPPTDVSTLAKG
LVKKYGRNFLQLRNLVVPEGGRGSLDSKHIKVNLDFKSGIRQSQIIFRIEEQPVHGQLRL
DVDQEQAEHTFSMLDLWHGRVMYIHGGSEDPQDFFMFSVFSSSRKEVPGYLKGHKLYRFN
VTVTPTNDAPELSLPEGNLFTLLENSKKRLTTDVLKAIDIDSNYTDLVYSVLGNLNADAG
YLENEDNPGTPVTSFSHSALVDGKMYYVHTGVRNSRIVLRVSDGEKVSNTVVLRIMAVGL
EYKISNNTGMEVIQGEMFLLSTNQLAIWTNALKQVVEIRYDVIEPPRFGELQRMHSSGEW
KITNSFSQRVLEKERLRYISTYQSIQTSDSTDHFKCKVTVASRATEVLVFPIKVKWIDYT
IKNNKPIELDKITRAVIDSEHLYVAAHGVNLSEDELRFRMLTLPKKGIIEVNNAKLDVNS
TFRQKDITDLKVQYQLMERSYEDTNDEFVFHIFSKHAHSASHIFKINIKADVNSIFMTNN
GLSLLEGASKLITKDDLFAETLSTKEMYYTVTKTPHHGKLMRINLSNSTKDFDNIMTFTN
QDILEXRIMFVHDDSETTLDSFTFIATTSPVTKLSLTYKDIGSKEGMFNITIQLVNDEKP
IRIVDKVFHVVKNGQRLLTLDDLCYHDADSDFSDGQLLYTRRGIPMGDLVLANDTSQKLY
QFRQEDLEQKRVLFIHHGMNSGRFVLFVSDGKHYVSSLLDISAQEAYLKIANNTGLLVQK
GQAKTLTNANFSVETNLDIRNDNEILFTIQEAPKHGGLYLKDSEIESFTQHDLRNGYLSY
HHDNSKNMADIFTLLVKAKDIRLDVKIHVKVYLESHQRPPVVLHNKTLLVEEGKPVKIES
NKLKVTHEASSPSEITFTVKVAPSHGYLRHFIEGKDQYQGTQEDPLVTFSQWDVNAGNIQ
YVQVAPGQGSDSFTLEASNGVAEVNDIIMSVDIIPRLIPIEVSNITLKEGASKALTEDVI
GVTNSHFSGLNFVYYVSEGPLHGRIENSRFRGIPTTYFTRKQVEQELIYYVHDNTESLED
HFTITANDTDLRKHSAPWTVYVQITAVNDEPPAITANRVLGVWVDSITEITPEDLNAEDE
DTLPEQLEFIITQPSNGHLALKTAPNRPIMNFTQAHIDQRQLLFVHSGPMAGGFNFQVND
GLNFAPRQIFSITARALVLNLEKAGPLKVFPGSLSLISNNILQAVTNDDTGISNRTLYFS
VISPPKFGKLVSLKANKTTTDISSFTQQMVDEGEVAYHQIHGTSLGWAALDKFIFTVSSP
PATLEPQTFDIDISYENIGPEQSSVLLKNEGVTVTEGDKVLIDKSMLDASNLMMKQPESK
RSSYEVWYQVTSLPKHGVVIVGERNLTKEKPNFSQFILNKYGITYHHDNSETTHDHFDFD
VYLNLKSKPPTRPLDLSEFVSQSFNITIIPINDQPPVLKTKAPSLKVVQGDTVAIGPNHL
SVVDLDNPPSEIQYTVISKPSNGFLAITERMNESVDSFSQAQINNGEVFFIHDGSPSSGA
FYFSVTDGHHRPLYKLFNLEVVEITVSLVNNTEVLLDQGHSSVTVTRSHLAAMTNGKNTT
VHYKITVPPKYGKLLLDDEDVTVFNQDDLQEEKLRYHMVSFESSHDNFEFAAFTTEANLT
NQVVNITVKPLIKYAEGATFPNGVRIKLKSHLLNVSELALLSGSDPLFEITSPPENGRIV
RAIGGKGKKVESVGSFTFSELQQEKLAIELKVNLTGVHEVNDSFRFVLKANNVQPANGIF
TFSIVPHVPALETSTVIPVTTIRPVFHNQTAAMSLFPSSTSLPERPTQRVTKSGSRFKGR
NRWGNSNSIDTGTTNLKPTHGGEEIYPINNTPVKVESVSQTGSSSNSMVILLPLLALLLL
VIIVVVLVLLLRRNWKKPKPLKSTPGAPAQLDNPSHQDQPHWPASIPVVTITPLTPRNAG
NSSITRLQTRSENSPYGTSVSLCSFGDLEPEVSQLCRTTNPTLRNNQYWV
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgacccttttaaacggactactcttgctctttgtcggactcgcacaaggggct
tcattctatggtgatggatttgtgcagttaaaagggacagagacgtctagccgtaacaca
ctgcacattcgtttccgcacctccagcctgagcggcctgcttttcctggctgcagggcag
aatgatttcctgctgctggagatgaatgcaggcagactgcaggtaaagttggatctggga
tctggagagcagatccttctctcagacagtggaacccagttgaatgatctggcctggcac
actgcagagctttttcatgacatttacaatgtcacattgactgtggacaaccactccaag
accagcctgcgaatgccaggtccagaacaagagctgcacatcaatggcggcctatatgtt
ggtggtactggaggattggatcaggcctatctgtccagagatctcaatggtttccgtggt
tgcctcgatgaagtaatatttaatcagcacaacctcctttcatcgctaaggccctactca
gggttcaagaatgtctatgaggtttccctaggatgcagccctcagttttttgccaatgaa
gatgacccaatcagttttttcagttcacgggcttatatatcccttcctccttggacagca
caacatgagtgggcttttgaatgctcaatccacacttcagctgaagaaggaatcatcatt
tacaactcagctcgacagggagattttgtcgctctagagatccagaaaggtctccttgtt
gcaatggttggtaaagatggaagtaaaacagagctacgttcccttaccttcatcaatgac
aacaaatggcacaacattcagctttttttcacaccaaaaaacctccaacttacagtagat
ggagaaactgtaaagtccatcattacctctagatcaaaaacctttcatctgaaaggttcc
cttttcctggggggaatcgatgacagcacacgttctgaggtcagaaaggttggcctttcc
tccgtagcagggaaacgtattaaaggtggctcctttaaaggatgcttcagagacattaaa
ataaataatgtcaaaatgggtcttcccaatgctgtggtaaccaaagacatctctgttggt
tgtgaacctgaaaaggagctggatataagcaccacagtgagcccaacaacccttcccata
acccttgttgactctgtcactccgctgccacccaccgatgtatccaccctagccaaaggt
cttgtcaagaagtacggacgcaattttttacagcttagaaaccttgttgtcccagaaggg
ggtcggggatccttggattcaaagcatattaaagtaaaccttgatttcaaaagcggcatc
cgtcagtctcagatcatctttaggattgaagagcagccggtgcatggtcagcttaggctt
gatgtagaccaggagcaggctgagcatacattcagcatgctggatttgtggcacggcaga
gtgatgtacatccatggaggatctgaagacccacaggactttttcatgttctctgtgttc
tccagtagcagaaaggaagtgccaggctatctaaagggacacaagttgtaccggtttaat
gtcacagttacaccaaccaatgatgcccctgagttgagtctacctgaggggaatctgttt
acccttttggaaaactccaagaagaggctgaccactgatgttctgaaagccattgacatt
gacagcaattacacagacctcgtttactctgtgttagggaaccttaatgctgatgctggg
tatttggagaacgaagacaatccaggtacaccagtaacttctttctcccattcagctctt
gtagacggtaagatgtactatgtccacacgggtgtgaggaactctaggattgtgttgaga
gtcagcgatggcgagaaggtgagcaacacagtggttcttagaatcatggctgtgggactt
gagtacaaaatctccaataacacaggaatggaagtgatccaaggagagatgtttctttta
agcaccaatcaactggccatctggaccaatgcattaaagcaagtagttgaaattcggtac
gatgtgattgagccaccaagatttggtgagctccaaaggatgcactcaagtggagaatgg
aagattaccaactcgttttcccaaagagttcttgaaaaggagcgtttgaggtacatcagc
acctaccagtccatccaaacaagtgatagtacagaccacttcaagtgtaaagtaactgtg
gcctccagagctactgaagtattggtgtttcccataaaggtaaagtggatagactacaca
ataaagaacaataaacctatagagctggacaaaattacgagagctgtaattgactcagag
catctgtatgtagcagcacatggtgtgaatttgtctgaggatgaacttcgttttagaatg
ttgactttaccaaagaagggaataattgaagtgaataatgccaagctagatgtaaattcc
acatttcgtcaaaaggacatcacagacctgaaagtccaataccaactaatggaaagatca
tacgaggacaccaatgatgaatttgttttccacatattctcaaagcatgcacattctgct
agtcacattttcaaaatcaatattaaagcagatgtcaacagcattttcatgacaaacaat
gggctgtcacttcttgaaggtgcaagtaaactgatcacaaaggatgatttgtttgctgaa
actctaagcactaaagaaatgtactatacagtcacaaagacaccacaccatggcaagcta
atgcgaatcaacttgtccaactctaccaaagactttgacaatattatgacctttaccaat
caagacattcttgagnngcgtattatgtttgttcacgatgacagtgaaacaactcttgat
agttttaccttcatagccaccacaagtccagtaacaaagctttctttaacatataaggac
attggctccaaggaaggcatgtttaacatcacgatacagctggttaatgatgagaaaccc
atccgcattgtagacaaagttttccatgtagtcaaaaatggacagaggttacttacactt
gatgacctgtgctaccatgatgcagattcggacttcagtgatgggcagcttctctacacc
cggcgtggtatcccaatgggggacttggttcttgcaaatgacacttcacaaaagctgtac
cagtttcgccaagaagacttggaacagaaacgagtgctgttcattcaccatgggatgaac
tctgggcgttttgttctctttgtgtcagatggcaagcactatgtgtcctcactgttggat
attagcgcacaggaagcttatttaaaaattgccaacaacacaggcctgttggttcagaaa
gggcaagccaaaacccttaccaatgctaactttagtgtagagacaaaccttgacatccga
aatgacaatgaaatattattcacaatccaagaggctccaaaacatggtgggctgtattta
aaagacagcgaaattgagtcattcacccagcatgacctgaggaatggctacttgtcttat
catcatgacaacagtaagaatatggctgacatttttacactcctggtgaaagcaaaggac
attcggcttgatgttaaaatacatgtgaaggtgtacctggaaagccatcagaggccaccc
gtagttcttcataacaaaaccttgctggtggaggagggaaaaccagttaagatcgagagc
aataaactcaaggtgactcatgaggctagttcaccttcagaaataacctttactgtcaaa
gttgctccatctcatggatatttacgccattttattgagggtaaagatcagtaccaagga
acacaagaggacccattagtgaccttttcccagtgggatgttaatgctggcaacattcag
tatgtacaggtggcacctggccaagggagtgattcattcactctggaggccagcaatgga
gtcgcagaggtcaatgacatcatcatgtctgtggatatcatcccacgcctcatacccatt
gaggtgtccaatatcactctgaaggaaggggcatctaaagctctcacagaggacgttatt
ggagtaacaaactcacatttctcaggcctcaattttgtgtactacgtctcagagggtcct
ctgcatggccgcattgagaattcacgtttcagagggattcccacaacctactttacaagg
aagcaggtggaacaggagttaatttattatgtccatgacaacacagagagcttagaggac
cacttcactatcacagcaaatgacacagacctgcgaaaacacagcgcaccatggactgtg
tatgtacagatcacagccgtcaatgacgagcctccagccattacagccaacagggttctc
ggggtgtgggtggactccatcacagagatcaccccagaggatctgaacgcagaagatgag
gacacgcttcctgagcagctggagttcattattactcaacccagcaatggtcacctggct
ctaaagactgcccccaacaggcccatcatgaactttactcaagctcacattgaccagcgg
caactgcttttcgtacatagtggcccaatggcaggaggcttcaacttccaagtaaatgat
ggtttgaactttgctcccaggcagatattcagtattacagctcgtgccctggttcttaat
ctagagaaggctggacctcttaaggtgtttccaggttccttatccttgatttcaaacaac
attcttcaggccgttaccaatgatgatactggcatctcaaacagaaccctttatttttct
gtgatcagtcccccaaaatttggaaaactggtcagtttgaaggcaaataagaccacaact
gatatttcatccttcacacaacaaatggtggatgagggtgaagtagcatatcatcaaatt
catgggacgtctttaggatgggcggccctagacaagttcatatttactgtgtcctctcca
cctgctacgcttgaaccccagacgtttgacattgacatttcatatgaaaatattggacct
gagcaaagttctgtgctcctcaaaaatgaaggtgtgacggtaactgaaggagataaagtg
ctaattgacaaatcaatgctggatgcatccaatctcatgatgaaacaacctgaatccaag
cgcagctcttatgaggtttggtaccaggtcacatctcttccaaagcatggcgtcgtcatc
gttggggaacgaaatcttacaaaagaaaagcccaatttctctcagttcatccttaataag
tatggaatcacataccatcatgacaactccgagaccacccatgaccattttgactttgat
gtgtatctgaaccttaagagcaaaccaccaacccgccccctagatctctcagagtttgtg
tcacaatcattcaatatcactataatccccataaatgatcaaccacctgttttgaagacc
aaagctcccagcctcaaagtcgttcagggagacaccgtggctatcggacccaaccactta
agtgtggttgacctggacaacccaccaagtgaaatccagtacacagtgattagcaaacct
agcaatggtttcctagccattacagagcgcatgaacgagtcagtggactccttctcccag
gctcaaatcaataatggagaggtgttcttcatccacgatggcagtccttcatctggagcg
ttctacttcagcgtcactgatggccatcatcgtccgttatataaactcttcaatctggaa
gtggtagagatcactgtttcactggttaacaacacagaggtgctactggaccagggacac
tcttctgtaactgtcacacggtcacacctggccgcaatgaccaatggtaaaaacactaca
gtgcactataaaatcacagtaccaccaaagtacggtaaactcttactagatgatgaagac
gtcactgttttcaatcaagatgatctccaggaggaaaagctgaggtaccacatggtcagc
tttgagtcatcccatgataactttgagtttgcggccttcacaacagaagcaaatctaact
aaccaagtagttaacatcactgtgaaacccctcattaagtacgcagaaggggcaacattt
cctaacggagttcgaattaagctgaagtcccatttgctgaatgtgtctgaacttgctttg
ttgagtggtagtgacccgttgtttgaaattacctcacctccagaaaacggcaggattgtc
cgggcaattggcggcaaggggaagaaagttgaatctgtggggtctttcacttttagtgaa
ctacagcaggagaaactggccattgagttgaaggtgaacctgacaggtgtccatgaagta
aatgattctttcagatttgttcttaaagccaacaacgtccaacccgccaatgggattttc
actttcagcatcgtacctcatgttcctgctctggagacgtcaacagtgatcccagtgacc
acaattagacctgtttttcataatcaaactgctgcaatgagcttgtttccatcttcaaca
tctttacctgagcggccgacgcaacgggtgaccaaatccgggtcaagatttaaaggtcgc
aaccgttggggtaattcaaacagcattgacacgggtactactaacctaaaaccaacccat
gggggggaggagatttatcccataaataataccccagtaaaagtagagtcagtttcccag
acgggctcttcctcaaactcaatggtcatccttttacctcttcttgctcttctgctgctg
gtcatcattgtggtcgtgttggtgctgctcttaagacggaactggaagaaaccaaagcct
ttaaagagtacgccaggtgctcctgctcaactggacaacccatctcatcaggaccagcca
cattggcctgcaagcatccccgtcgtaaccatcactcctcttactccaagaaacgctgga
aattcatccataaccagactgcaaaccagaagtgagaactctccgtatggcacgtctgtg
tctctgtgctcttttggagacctggagcctgaagtttcacagctttgcaggaccaccaac
cccactctgcgaaacaatcagtactgggtatga
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integrated database retrieval system
