Onychostoma macrolepis: 131541566
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Entry
131541566 CDS
T09350
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131541566 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131541566 (nup88)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131541566 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
CCDC138_C
HTH_32
Motif
Other DBs
NCBI-GeneID:
131541566
NCBI-ProteinID:
XP_058633377
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All DBs
Position
05:26831289..26844507
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AA seq
720 aa
AA seq
DB search
MASFAGDRWREALKNHDIFTKLQERLHLEPQGTSKRIAKNLTFCLNGDLFIWDSVESVFY
TTNLRQLNTDGDTDTSKYQTLLCINPPLFEVCQVLVSPTQYHVALIGQRGATILELPQRW
GKRSEFEGGRIQINCKTIPVAERFFTSSASVTLRQAAWYPSETEEPPLVLLTSDNTIRIY
NLKEPQSPAKVLSVSQVDEESIVHTRGRSYAASLGETAVAFDFGPLADSPRLSGLRMKTE
LLVYPLYILYGNGETFLSYISLTHSVSNLGKPMGPLPMYPAAEDNYGYDACAVLCLPCVP
NILVIATESGMLYHCVVLEAEEEEDGGAVERWSRGSETVPSLYVFECVELELTLKLAAGE
EEEITESDFTCPIRLHRDPLCQHRYHCTHEAGVHSVGLTWFKKLHNFLDSDEEDKDSLQE
LAAEQRCIVEHILCTRPLANSLPAPVRGFWIVSDLSLGATMICITSTYECLLLPLLSSIR
PPSPPLLCSHPGAGSGSSPLRGLAEDSFEQHVRNILARSSTNPLMLRAGDKDSSPPPPEC
LQLLSRATQVFREEYILKLGLAHEEMQRRVKLLTGQKNKQLEDLALCREERKSLREAAER
LADKYEDAKYRQEAIMNRVKQVLGSLRSQLPVLSDSEKDMRKELQTIHDQLRHLDNGIKQ
VNMKKEYQKKQMNTGASPARSSLTLNAHQRKCVQGVLKEQGEHIAGMMKQIKDIKNHFSF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttgcgggagatcgctggagggaagcgctgaaaaaccacgacatcttcact
aaattacaagaaagacttcatttagagcctcaggggacaagcaaaagaatagccaagaac
cttacgttttgtctgaacggtgacctattcatatgggatagtgttgagagcgtgttttac
accacaaacctgcggcagctgaacactgacggcgacacggacacttctaaataccagact
ctgctgtgcatcaacccgccgctgtttgaggtgtgtcaggtgcttgtcagcccgacgcag
tatcatgtggctctcatcggtcagcgtggagcgactatactggaactgcctcagcgctgg
ggcaagaggtcagagttcgagggtggacgcatccagatcaactgcaagacgattcctgtg
gctgaacgtttcttcaccagctctgcctctgtgacactccgacaggctgcctggtatccc
agtgaaactgaggagcctcctctggttttgctgacctcagataacaccatcagaatttat
aatcttaaggagccacagtcccctgccaaagtcttatctgtgtctcaggtagacgaggaa
agcattgttcatacaagaggacgttcctatgcagcatctctgggcgagacggctgtggcg
tttgactttgggccactggcggattctcctcgtctgagcggtctgcgtatgaagacagag
ctactggtgtatccactgtatatactgtatgggaatggagagacgtttctgagctatatt
tctctcacacacagtgtcagtaatttagggaagccgatgggccctttacccatgtacccc
gcagcagaagataattatggctatgatgcgtgtgctgtgctctgcctgccttgtgtgcca
aacatcctggttattgccactgaatcaggaatgctgtaccactgtgtggtgctggaggca
gaggaagaggaggatggcggagctgtagagagatggtccagaggctcagagaccgtgccc
tcgctttatgtgtttgagtgtgtggagctggaactgacgctcaaactggctgctggggag
gaggaggagattacagagtcagattttacctgcccaatcagattacaccgagaccctctg
tgtcagcacaggtaccactgcacccatgaggccggtgtacacagtgtaggactcacctgg
ttcaaaaaactgcacaattttctggattctgatgaggaggataaagacagtctgcaggag
ctggcggcagagcagcgctgcatagtggagcacatcctatgcaccagacctctcgctaat
agtttgccggctcctgttcgtgggttttggatagtgtcagacctgtccctgggagccacc
atgatctgcatcacgagtacctatgagtgtctcctgctccctctgctaagctctattcgt
cccccgtcccctccgttgctctgctctcatccgggggcggggtcaggaagctctcctctg
cgtggattggctgaagactctttcgaacagcatgttcgcaacatcctggcacgcagctca
accaatccattaatgctaagggcaggtgataaggactcgtctcctcctcctccagaatgt
ctgcagctgttgagcagagccacacaggtgttcagagaggagtacatccttaaactgggc
ctggcgcatgaagaaatgcagagaagagtaaagctcctgaccggccagaagaataagcag
ctggaggatcttgctctttgtagagaggagagaaaaagcctgagagaggctgcggagcga
ctggctgataaatatgaagatgccaagtatcgtcaggaagccatcatgaacagagtaaaa
caggttttgggaagtctgcggagccaacttcctgtgctgtcagacagtgagaaggacatg
aggaaggaactgcaaaccatccatgatcagctccgtcaccttgacaacggcattaaacag
gtgaacatgaagaaggaatatcagaagaagcagatgaatacaggagcatctccggctcgc
tccagtctcacactcaacgcccaccagaggaagtgtgtccagggagtgctgaaagaacaa
ggagagcacatcgctggcatgatgaagcagatcaaggacatcaagaaccatttcagtttc
tga
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