Onychostoma macrolepis: 131541650
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Entry
131541650 CDS
T09350
Symbol
rxrab
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
omc
Onychostoma macrolepis
Pathway
omc03320
PPAR signaling pathway
omc04148
Efferocytosis
omc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131541650 (rxrab)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
131541650 (rxrab)
03320 PPAR signaling pathway
131541650 (rxrab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131541650 (rxrab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omc03310
]
131541650 (rxrab)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
131541650 (rxrab)
Nuclear receptors [BR:
omc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
131541650 (rxrab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
131541650
NCBI-ProteinID:
XP_058633525
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Position
05:complement(6693981..6756843)
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AA seq
509 aa
AA seq
DB search
METKPFLSLGLLKNPCSVAPPCLRSRPGDAGSSPNGCSGFMGTYPLQQRRISTDSSGQLS
SSPLSSSTGHRGFSNHPLHPPLLSQSAMNSSPGQMHSPISTLSSPINGLPSPFPIISSPM
GHPSMSGPSSTSMTFRPSLSPQLSSPMNAVSSSEDIKPPLGLNGVMKVPAQPTGTCLSLI
KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCR
YQKCLAMGMKREAVQEERQRAKERSESEFGSCANEDMPVEKILEAELAVEPKTETYVEAN
LSAPANSPNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASF
SHRSIAVKDGILLATGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAI
VLFNPDSKGLSNPSEVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccattcttgtctctagggctcctgaaaaacccctgctcagtagcaccg
ccatgtttgcggagccggccgggcgacgctggcagttcgcccaatggctgctctggcttc
atgggtacatacccgctacaacagcgcaggatatccacagactcctctggtcagctctcg
tcgtctcctctgagctcctccacaggtcaccgaggcttcagtaaccatcctctccaccca
cccctgctcagccagtccgccatgaactccagcccgggtcagatgcattcgcccatcagc
acccttagctcacccatcaacggcctgccctcgccgttccccatcatcagctcacccatg
ggccacccctccatgagcggcccgtcctccactagcatgaccttcagacccagcctgagc
ccacagctcagctcacccatgaatgcagtcagtagttcagaggacattaaaccccctctg
ggtctgaacggggtgatgaaggtcccagcgcagcccacaggcacatgcctctccctcatt
aaacacatctgtgccatttgcggagaccgttcatcaggtaaacactacggggtgtacagc
tgtgagggctgtaagggcttcttcaagagaacggtgagaaaggatttgacgtacacttgc
cgagacaacaaggactgtctaattgacaaacgccaacgcaaccgctgccagtactgccgt
tatcagaagtgcttagccatgggaatgaagagagaagctgttcaggaggagcggcagcgg
gcgaaggagcggagcgagagtgagttcggcagctgtgccaacgaggacatgcccgtggag
aagattctggaagccgaactggcagtggaaccaaagacggagacctacgtggaggccaac
ctgagtgcgcctgccaattctcctaacgaccctgtaacaaacatctgccaagcagctgac
aagcaactctttaccttagtggagtgggccaagcggatacctcacttttctgatctcccg
ctggacgatcaagtcatcctcctgagagcagggtggaatgaactcctgatcgcctctttt
tcacatcgttctatagctgtgaaagatgggatattattagccacaggccttcacgtccat
agaaacagtgcacacactgccggtgtgggagccatctttgacagagtgctgacggagctt
gtgtcaaagatgagagacatgcaaatggacaagactgaacttggatgcctgcgggccatt
gttctgttcaatccagattcaaaaggactgtctaatccatcagaggtggaggcattaagg
gaaagagtgtatgcatctctagaggcctactgtaaacacaaatatcctgatcagcctgga
agatttgccaagctgttactgcgtctgcctgccctgcggtccatcggcctgaagtgtctt
gaacatctcttctttttcaagttaatcggagacacacccatcgacactttcctaatggaa
atgctcgaagcgccacaccaaatgacataa
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